RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 NAALADL2Q58DX5 795 aa7.63□□□□□ -1.19
CTDSPL2-206ENST00000559175 PAX3P23760 479 aa7.63□□□□□ -1.19
CTDSPL2-206ENST00000559175 TTLL12Q14166 644 aaPredicted RBP7.63□□□□□ -1.19
CTDSPL2-206ENST00000559175 DPH6Q7L8W6 267 aa7.63□□□□□ -1.19
CTDSPL2-206ENST00000559175 UBXN4Q92575 508 aa7.63□□□□□ -1.19
CTDSPL2-206ENST00000559175 RYDENQ9NUL5 291 aaKnown RBP7.63□□□□□ -1.19
CTDSPL2-206ENST00000559175 INO80Q9ULG1 1556 aaPredicted RBP7.63□□□□□ -1.19
CTDSPL2-206ENST00000559175 ZC3H13Q5T200 1668 aaKnown RBP7.62□□□□□ -1.19
CTDSPL2-206ENST00000559175 POM121CA8CG34 1229 aa7.62□□□□□ -1.19
CTDSPL2-206ENST00000559175 CAMSAP2Q08AD1 1489 aa7.62□□□□□ -1.19
CTDSPL2-206ENST00000559175 CNGB1Q14028 1251 aaPredicted RBP7.62□□□□□ -1.19
CTDSPL2-206ENST00000559175 RNF17Q9BXT8 1623 aaKnown RBP7.62□□□□□ -1.19
CTDSPL2-206ENST00000559175 SIGLEC1Q9BZZ2 1709 aa7.61□□□□□ -1.19
CTDSPL2-206ENST00000559175 TCOF1Q13428 1488 aaKnown RBP7.61□□□□□ -1.19
CTDSPL2-206ENST00000559175 ADGBQ8N7X0 1667 aa7.61□□□□□ -1.19
CTDSPL2-206ENST00000559175 PARNO95453 639 aaKnown RBP7.61□□□□□ -1.19
CTDSPL2-206ENST00000559175 CSB-PGBD3P0DP91 1061 aa7.61□□□□□ -1.19
CTDSPL2-206ENST00000559175 VGFO15240 615 aaPredicted RBP7.61□□□□□ -1.19
CTDSPL2-206ENST00000559175 BCL2L13Q9BXK5 485 aa7.6□□□□□ -1.19
CTDSPL2-206ENST00000559175 FAM193AP78312 1265 aa7.6□□□□□ -1.19
CTDSPL2-206ENST00000559175 VPS8Q8N3P4 1428 aa7.6□□□□□ -1.19
CTDSPL2-206ENST00000559175 NEURL4Q96JN8 1562 aa7.6□□□□□ -1.19
CTDSPL2-206ENST00000559175 CDCA8Q53HL2 280 aa7.59□□□□□ -1.19
CTDSPL2-206ENST00000559175 GLMNQ92990 594 aa7.59□□□□□ -1.19
CTDSPL2-206ENST00000559175 GDPD2Q9HCC8 539 aa7.59□□□□□ -1.19
CTDSPL2-206ENST00000559175 ARHGEF5Q12774 1597 aa7.59□□□□□ -1.19
CTDSPL2-206ENST00000559175 SH3BP5O60239 455 aa7.59□□□□□ -1.19
CTDSPL2-206ENST00000559175 MORC4Q8TE76 937 aa7.59□□□□□ -1.19
CTDSPL2-206ENST00000559175 PHLDB1Q86UU1 1377 aa7.59□□□□□ -1.19
CTDSPL2-206ENST00000559175 RBM46Q8TBY0 533 aaKnown RBP7.59□□□□□ -1.19
CTDSPL2-206ENST00000559175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.59□□□□□ -1.19
CTDSPL2-206ENST00000559175 TMX4Q9H1E5 349 aaPredicted RBP7.59□□□□□ -1.19
CTDSPL2-206ENST00000559175 CASKIN1Q8WXD9 1431 aa7.58□□□□□ -1.2
CTDSPL2-206ENST00000559175 ARHGEF40Q8TER5 1519 aa7.58□□□□□ -1.2
CTDSPL2-206ENST00000559175 KIF4AO95239 1232 aa7.58□□□□□ -1.2
CTDSPL2-206ENST00000559175 C9orf131Q5VYM1 1079 aa7.58□□□□□ -1.2
CTDSPL2-206ENST00000559175 CCDC102AQ96A19 550 aa7.58□□□□□ -1.2
CTDSPL2-206ENST00000559175 U3KPZ7 1027 aaPredicted RBP7.58□□□□□ -1.2
CTDSPL2-206ENST00000559175 SBNO2Q9Y2G9 1366 aa7.58□□□□□ -1.2
CTDSPL2-206ENST00000559175 NME8Q8N427 588 aa7.58□□□□□ -1.2
CTDSPL2-206ENST00000559175 CCDC18Q5T9S5 1454 aa7.58□□□□□ -1.2
CTDSPL2-206ENST00000559175 SPOCK3Q9BQ16 436 aa7.58□□□□□ -1.2
CTDSPL2-206ENST00000559175 SNRKQ9NRH2 765 aa7.58□□□□□ -1.2
CTDSPL2-206ENST00000559175 AGLP35573 1532 aa7.58□□□□□ -1.2
CTDSPL2-206ENST00000559175 PPFIA4O75335 1185 aa7.57□□□□□ -1.2
CTDSPL2-206ENST00000559175 DCAF8Q5TAQ9 597 aa7.57□□□□□ -1.2
CTDSPL2-206ENST00000559175 EHBP1L1Q8N3D4 1523 aa7.57□□□□□ -1.2
CTDSPL2-206ENST00000559175 TTC37Q6PGP7 1564 aa7.57□□□□□ -1.2
CTDSPL2-206ENST00000559175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.57□□□□□ -1.2
CTDSPL2-206ENST00000559175 CREB3O43889 395 aa7.57□□□□□ -1.2
CTDSPL2-206ENST00000559175 ZC3H6P61129 1189 aaKnown RBP7.57□□□□□ -1.2
CTDSPL2-206ENST00000559175 HNRNPUL2Q1KMD3 747 aaKnown RBP7.57□□□□□ -1.2
CTDSPL2-206ENST00000559175 NEFMP07197 916 aa7.57□□□□□ -1.2
CTDSPL2-206ENST00000559175 TAGLNQ01995 201 aaKnown RBP7.57□□□□□ -1.2
CTDSPL2-206ENST00000559175 ZFYVE27Q5T4F4 411 aa7.57□□□□□ -1.2
CTDSPL2-206ENST00000559175 PMM1Q92871 262 aa7.57□□□□□ -1.2
CTDSPL2-206ENST00000559175 RRBP1Q9P2E9 1410 aaKnown RBP7.57□□□□□ -1.2
CTDSPL2-206ENST00000559175 EPRSP07814 1512 aaKnown RBP7.56□□□□□ -1.2
CTDSPL2-206ENST00000559175 CEP162Q5TB80 1403 aa7.56□□□□□ -1.2
CTDSPL2-206ENST00000559175 DCAF8L1A6NGE4 600 aa7.56□□□□□ -1.2
CTDSPL2-206ENST00000559175 PBXIP1Q96AQ6 731 aa7.56□□□□□ -1.2
CTDSPL2-206ENST00000559175 PTPN23Q9H3S7 1636 aa7.56□□□□□ -1.2
CTDSPL2-206ENST00000559175 SUPT6HQ7KZ85 1726 aaKnown RBP7.56□□□□□ -1.2
CTDSPL2-206ENST00000559175 AKNAQ7Z591 1439 aa7.56□□□□□ -1.2
CTDSPL2-206ENST00000559175 PLB1Q6P1J6 1458 aa7.56□□□□□ -1.2
CTDSPL2-206ENST00000559175 NEO1Q92859 1461 aa7.56□□□□□ -1.2
CTDSPL2-206ENST00000559175 PDE6BP35913 854 aa7.56□□□□□ -1.2
CTDSPL2-206ENST00000559175 PROCA1Q8NCQ7 364 aaPredicted RBP7.56□□□□□ -1.2
CTDSPL2-206ENST00000559175 CCER1Q8TC90 406 aaPredicted RBP7.55□□□□□ -1.2
CTDSPL2-206ENST00000559175 G3BP2Q9UN86 482 aaKnown RBP7.55□□□□□ -1.2
CTDSPL2-206ENST00000559175 CHRM1P11229 460 aaPredicted RBP7.55□□□□□ -1.2
CTDSPL2-206ENST00000559175 STAG3Q9UJ98 1225 aa7.55□□□□□ -1.2
CTDSPL2-206ENST00000559175 CCER2I3L3R5 266 aa7.54□□□□□ -1.2
CTDSPL2-206ENST00000559175 MS4A1P11836 297 aa7.54□□□□□ -1.2
CTDSPL2-206ENST00000559175 NOM1Q5C9Z4 860 aaKnown RBP7.54□□□□□ -1.2
CTDSPL2-206ENST00000559175 VWDEQ8N2E2 1590 aa7.54□□□□□ -1.2
CTDSPL2-206ENST00000559175 hCG_2014768A0A024R1R8 64 aa7.54□□□□□ -1.2
CTDSPL2-206ENST00000559175 KDM5DQ9BY66 1539 aa7.54□□□□□ -1.2
CTDSPL2-206ENST00000559175 POLR3EQ9NVU0 708 aa7.54□□□□□ -1.2
CTDSPL2-206ENST00000559175 VRTNQ9H8Y1 702 aa7.53□□□□□ -1.2
CTDSPL2-206ENST00000559175 DMRT2Q9Y5R5 561 aa7.53□□□□□ -1.2
CTDSPL2-206ENST00000559175 ABL2P42684 1182 aa7.53□□□□□ -1.2
CTDSPL2-206ENST00000559175 KIF14Q15058 1648 aa7.53□□□□□ -1.2
CTDSPL2-206ENST00000559175 MAGI2Q86UL8 1455 aa7.52□□□□□ -1.21
CTDSPL2-206ENST00000559175 TSNAXIP1Q2TAA8 658 aa7.52□□□□□ -1.21
CTDSPL2-206ENST00000559175 LONRF3Q496Y0 759 aa7.52□□□□□ -1.21
CTDSPL2-206ENST00000559175 USTQ9Y2C2 406 aa7.52□□□□□ -1.21
CTDSPL2-206ENST00000559175 LNPKQ9C0E8 428 aa7.51□□□□□ -1.21
CTDSPL2-206ENST00000559175 NUP153P49790 1475 aaKnown RBP7.51□□□□□ -1.21
CTDSPL2-206ENST00000559175 DNMT1P26358 1616 aaKnown RBP7.51□□□□□ -1.21
CTDSPL2-206ENST00000559175 PPP1R37O75864 691 aa7.51□□□□□ -1.21
CTDSPL2-206ENST00000559175 GTF2E1P29083 439 aaPredicted RBP7.51□□□□□ -1.21
CTDSPL2-206ENST00000559175 C8orf37Q96NL8 207 aa7.51□□□□□ -1.21
CTDSPL2-206ENST00000559175 RPS6KL1Q9Y6S9 549 aa7.51□□□□□ -1.21
CTDSPL2-206ENST00000559175 CLIP1P30622 1438 aa7.5□□□□□ -1.21
CTDSPL2-206ENST00000559175 CCDC194A0A1B0GVG4 234 aa7.5□□□□□ -1.21
CTDSPL2-206ENST00000559175 DNAJC14Q6Y2X3 702 aaPredicted RBP7.5□□□□□ -1.21
CTDSPL2-206ENST00000559175 DHX38Q92620 1227 aaKnown RBP7.5□□□□□ -1.21
CTDSPL2-206ENST00000559175 IQSEC3Q9UPP2 1182 aaPredicted RBP7.5□□□□□ -1.21
CTDSPL2-206ENST00000559175 IGBP1P78318 339 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms