RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 KIF7Q2M1P5 1343 aa25.22■■□□□ 1.63
CLPX-203ENST00000558958 CCDC7Q96M83 1385 aa25.22■■□□□ 1.63
CLPX-203ENST00000558958 MINK1Q8N4C8 1332 aaPredicted RBP25.19■■□□□ 1.62
CLPX-203ENST00000558958 NKTRP30414 1462 aaKnown RBP25.17■■□□□ 1.62
CLPX-203ENST00000558958 CDCA8Q53HL2 280 aa25.16■■□□□ 1.62
CLPX-203ENST00000558958 EVC2Q86UK5 1308 aa25.16■■□□□ 1.62
CLPX-203ENST00000558958 TULP4Q9NRJ4 1543 aa25.16■■□□□ 1.62
CLPX-203ENST00000558958 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.14■■□□□ 1.62
CLPX-203ENST00000558958 STRCP1A6NGW2 1772 aa25.14■■□□□ 1.62
CLPX-203ENST00000558958 POLR3GLQ9BT43 218 aa25.12■■□□□ 1.61
CLPX-203ENST00000558958 PROSER2Q86WR7 435 aaPredicted RBP25.11■■□□□ 1.61
CLPX-203ENST00000558958 PUS7Q96PZ0 661 aaKnown RBP25.11■■□□□ 1.61
CLPX-203ENST00000558958 ADGRB2O60241 1585 aa25.11■■□□□ 1.61
CLPX-203ENST00000558958 ZNF335Q9H4Z2 1342 aaPredicted RBP25.1■■□□□ 1.61
CLPX-203ENST00000558958 WASLO00401 505 aaPredicted RBP25.09■■□□□ 1.61
CLPX-203ENST00000558958 CDK19Q9BWU1 502 aa25.09■■□□□ 1.61
CLPX-203ENST00000558958 DDX10Q13206 875 aaKnown RBP25.09■■□□□ 1.61
CLPX-203ENST00000558958 RBM33Q96EV2 1170 aaKnown RBP25.08■■□□□ 1.6
CLPX-203ENST00000558958 CABP2Q9NPB3 220 aa25.07■■□□□ 1.6
CLPX-203ENST00000558958 SRPK2P78362 688 aaKnown RBP25.06■■□□□ 1.6
CLPX-203ENST00000558958 ADGRL3Q9HAR2 1447 aa25.05■■□□□ 1.6
CLPX-203ENST00000558958 NCOA3Q9Y6Q9 1424 aa25.04■■□□□ 1.6
CLPX-203ENST00000558958 TMEM94Q12767 1356 aa25.04■■□□□ 1.6
CLPX-203ENST00000558958 NALCNQ8IZF0 1738 aa25.03■■□□□ 1.6
CLPX-203ENST00000558958 ATAD2Q6PL18 1390 aa25.02■■□□□ 1.6
CLPX-203ENST00000558958 C14orf37Q86TY3 774 aa25.01■■□□□ 1.59
CLPX-203ENST00000558958 LRRC7Q96NW7 1537 aa25.01■■□□□ 1.59
CLPX-203ENST00000558958 CDC42BPGQ6DT37 1551 aa25■■□□□ 1.59
CLPX-203ENST00000558958 MYOM1P52179 1685 aa24.98■■□□□ 1.59
CLPX-203ENST00000558958 C19orf44Q9H6X5 657 aa24.98■■□□□ 1.59
CLPX-203ENST00000558958 DIEXFQ68CQ4 756 aaKnown RBP24.96■■□□□ 1.59
CLPX-203ENST00000558958 NUDT16Q96DE0 195 aaKnown RBP24.96■■□□□ 1.59
CLPX-203ENST00000558958 PRR36Q9H6K5 1346 aa24.96■■□□□ 1.59
CLPX-203ENST00000558958 ATP7BP35670 1465 aa24.96■■□□□ 1.59
CLPX-203ENST00000558958 SLC12A5Q9H2X9 1139 aa24.96■■□□□ 1.59
CLPX-203ENST00000558958 NINLQ9Y2I6 1382 aa24.95■■□□□ 1.58
CLPX-203ENST00000558958 TMC1Q8TDI8 760 aa24.95■■□□□ 1.58
CLPX-203ENST00000558958 CCDC61Q9Y6R9 512 aa24.94■■□□□ 1.58
CLPX-203ENST00000558958 FMN2Q9NZ56 1722 aa24.94■■□□□ 1.58
CLPX-203ENST00000558958 XIRP1Q702N8 1843 aaKnown RBP24.94■■□□□ 1.58
CLPX-203ENST00000558958 LTBP4Q8N2S1 1624 aa24.93■■□□□ 1.58
CLPX-203ENST00000558958 PANK3Q9H999 370 aa24.93■■□□□ 1.58
CLPX-203ENST00000558958 DCCP43146 1447 aa24.93■■□□□ 1.58
CLPX-203ENST00000558958 ANKARQ7Z5J8 1434 aa24.93■■□□□ 1.58
CLPX-203ENST00000558958 NUTM2FA1L443 756 aa24.92■■□□□ 1.58
CLPX-203ENST00000558958 CABP1Q9NZU7 370 aa24.91■■□□□ 1.58
CLPX-203ENST00000558958 USP32Q8NFA0 1604 aa24.91■■□□□ 1.58
CLPX-203ENST00000558958 MSH6P52701 1360 aa24.9■■□□□ 1.58
CLPX-203ENST00000558958 PPIP5K1Q6PFW1 1433 aa24.9■■□□□ 1.58
CLPX-203ENST00000558958 TOPAZ1Q8N9V7 1692 aa24.88■■□□□ 1.57
CLPX-203ENST00000558958 ATF3P18847 181 aa24.88■■□□□ 1.57
CLPX-203ENST00000558958 ANKRD36BQ8N2N9 1353 aa24.87■■□□□ 1.57
CLPX-203ENST00000558958 PLEKHG3A1L390 1219 aa24.86■■□□□ 1.57
CLPX-203ENST00000558958 PER1O15534 1290 aaPredicted RBP24.86■■□□□ 1.57
CLPX-203ENST00000558958 CADPS2Q86UW7 1296 aa24.86■■□□□ 1.57
CLPX-203ENST00000558958 CD163L1Q9NR16 1453 aa24.86■■□□□ 1.57
CLPX-203ENST00000558958 TERF2IPQ9NYB0 399 aa24.85■■□□□ 1.57
CLPX-203ENST00000558958 RGPD8O14715 1765 aaPredicted RBP24.84■■□□□ 1.57
CLPX-203ENST00000558958 ITSN1Q15811 1721 aa24.83■■□□□ 1.57
CLPX-203ENST00000558958 CARD14Q9BXL6 1004 aa24.83■■□□□ 1.57
CLPX-203ENST00000558958 A0A1W2PP64 1363 aa24.83■■□□□ 1.57
CLPX-203ENST00000558958 MST1RQ04912 1400 aa24.83■■□□□ 1.56
CLPX-203ENST00000558958 CPSF1Q10570 1443 aaKnown RBP24.82■■□□□ 1.56
CLPX-203ENST00000558958 HDGFL2Q7Z4V5 671 aaPredicted RBP24.82■■□□□ 1.56
CLPX-203ENST00000558958 C1orf167Q5SNV9 1468 aa24.81■■□□□ 1.56
CLPX-203ENST00000558958 KNSTRNQ9Y448 316 aa24.79■■□□□ 1.56
CLPX-203ENST00000558958 ACEP12821 1306 aa24.79■■□□□ 1.56
CLPX-203ENST00000558958 POLR3AO14802 1390 aaPredicted RBP24.78■■□□□ 1.56
CLPX-203ENST00000558958 PMFBP1Q8TBY8 1022 aa24.78■■□□□ 1.56
CLPX-203ENST00000558958 ESCO1Q5FWF5 840 aa24.77■■□□□ 1.56
CLPX-203ENST00000558958 ZNF692Q9BU19 519 aaPredicted RBP24.77■■□□□ 1.56
CLPX-203ENST00000558958 PHF8Q9UPP1 1060 aa24.77■■□□□ 1.56
CLPX-203ENST00000558958 NSD3Q9BZ95 1437 aa24.77■■□□□ 1.56
CLPX-203ENST00000558958 ORAI2Q96SN7 254 aa24.77■■□□□ 1.56
CLPX-203ENST00000558958 KTN1Q86UP2 1357 aaKnown RBP24.76■■□□□ 1.55
CLPX-203ENST00000558958 AMER1Q5JTC6 1135 aaPredicted RBP24.75■■□□□ 1.55
CLPX-203ENST00000558958 NGDNQ8NEJ9 315 aaKnown RBP24.75■■□□□ 1.55
CLPX-203ENST00000558958 AKAP12Q02952 1782 aa24.74■■□□□ 1.55
CLPX-203ENST00000558958 SLAIN2Q9P270 581 aa24.74■■□□□ 1.55
CLPX-203ENST00000558958 ANP32CO43423 234 aa24.72■■□□□ 1.55
CLPX-203ENST00000558958 NPC1L1Q9UHC9 1359 aa24.72■■□□□ 1.55
CLPX-203ENST00000558958 MON2Q7Z3U7 1717 aa24.72■■□□□ 1.55
CLPX-203ENST00000558958 EDC4Q6P2E9 1401 aaKnown RBP24.72■■□□□ 1.55
CLPX-203ENST00000558958 USP6P35125 1406 aa24.71■■□□□ 1.55
CLPX-203ENST00000558958 CGNL1Q0VF96 1302 aa24.7■■□□□ 1.55
CLPX-203ENST00000558958 KIF1AQ12756 1690 aa24.69■■□□□ 1.54
CLPX-203ENST00000558958 SSH2Q76I76 1423 aa24.68■■□□□ 1.54
CLPX-203ENST00000558958 CC2D1BQ5T0F9 858 aaKnown RBP24.68■■□□□ 1.54
CLPX-203ENST00000558958 MIER1Q8N108 512 aa24.68■■□□□ 1.54
CLPX-203ENST00000558958 PRKRIP1Q9H875 184 aaPredicted RBP24.68■■□□□ 1.54
CLPX-203ENST00000558958 CNGB1Q14028 1251 aaPredicted RBP24.66■■□□□ 1.54
CLPX-203ENST00000558958 BRINP3Q76B58 766 aa24.66■■□□□ 1.54
CLPX-203ENST00000558958 NRKQ7Z2Y5 1582 aa24.66■■□□□ 1.54
CLPX-203ENST00000558958 TTC21BQ7Z4L5 1316 aa24.65■■□□□ 1.54
CLPX-203ENST00000558958 FOXO3O43524 673 aa24.65■■□□□ 1.54
CLPX-203ENST00000558958 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.65■■□□□ 1.54
CLPX-203ENST00000558958 IQSEC2Q5JU85 1478 aa24.65■■□□□ 1.54
CLPX-203ENST00000558958 FYB1O15117 783 aa24.64■■□□□ 1.54
CLPX-203ENST00000558958 PSME1Q06323 249 aa24.64■■□□□ 1.54
CLPX-203ENST00000558958 BRD4O60885 1362 aaPredicted RBP24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms