RNA–Protein interactions for RNA: ENST00000558449.1

AC012409.1-202, humanhuman

TSL 2 BASIC

Gene AC012409.1, Length 639 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.1-202ENST00000558449 C6orf229H3BNL8 230 aa11.67□□□□□ -0.54
AC012409.1-202ENST00000558449 RNF40O75150 1001 aa11.67□□□□□ -0.54
AC012409.1-202ENST00000558449 TRIM26Q12899 539 aaPredicted RBP11.67□□□□□ -0.54
AC012409.1-202ENST00000558449 HELBQ8NG08 1087 aaPredicted RBP11.67□□□□□ -0.54
AC012409.1-202ENST00000558449 TSC1Q92574 1164 aa11.67□□□□□ -0.54
AC012409.1-202ENST00000558449 NDUFB9Q9Y6M9 179 aa11.67□□□□□ -0.54
AC012409.1-202ENST00000558449 POM121CA8CG34 1229 aa11.66□□□□□ -0.54
AC012409.1-202ENST00000558449 CFAP99D6REC4 459 aa11.66□□□□□ -0.54
AC012409.1-202ENST00000558449 ZFRQ96KR1 1074 aaKnown RBP11.66□□□□□ -0.54
AC012409.1-202ENST00000558449 HMX1Q9NP08 348 aaPredicted RBP11.66□□□□□ -0.54
AC012409.1-202ENST00000558449 SYMPKQ92797 1274 aaKnown RBP11.65□□□□□ -0.54
AC012409.1-202ENST00000558449 CALR3Q96L12 384 aaKnown RBP11.65□□□□□ -0.54
AC012409.1-202ENST00000558449 TK2O00142 265 aa11.64□□□□□ -0.55
AC012409.1-202ENST00000558449 PDIA4P13667 645 aaKnown RBP11.64□□□□□ -0.55
AC012409.1-202ENST00000558449 KMT5BQ4FZB7 885 aa11.64□□□□□ -0.55
AC012409.1-202ENST00000558449 LRRN4Q8WUT4 740 aa11.64□□□□□ -0.55
AC012409.1-202ENST00000558449 TRIM34Q9BYJ4 488 aa11.64□□□□□ -0.55
AC012409.1-202ENST00000558449 PODXL2Q9NZ53 605 aa11.64□□□□□ -0.55
AC012409.1-202ENST00000558449 IRF5Q13568 498 aa11.63□□□□□ -0.55
AC012409.1-202ENST00000558449 MRPL50Q8N5N7 158 aaKnown RBP11.62□□□□□ -0.55
AC012409.1-202ENST00000558449 GLMNQ92990 594 aa11.62□□□□□ -0.55
AC012409.1-202ENST00000558449 PRR7Q8TB68 274 aa11.6□□□□□ -0.55
AC012409.1-202ENST00000558449 POTEB3A0JP26 581 aa11.59□□□□□ -0.55
AC012409.1-202ENST00000558449 ACTN4O43707 911 aaKnown RBP11.59□□□□□ -0.55
AC012409.1-202ENST00000558449 WASHC4Q2M389 1173 aa11.59□□□□□ -0.55
AC012409.1-202ENST00000558449 PUS10Q3MIT2 529 aaKnown RBP11.59□□□□□ -0.55
AC012409.1-202ENST00000558449 MORN1Q5T089 497 aa11.59□□□□□ -0.55
AC012409.1-202ENST00000558449 POTEBQ6S5H4 581 aa11.59□□□□□ -0.55
AC012409.1-202ENST00000558449 NECTIN2Q92692 538 aa11.59□□□□□ -0.55
AC012409.1-202ENST00000558449 LRCH3Q96II8 777 aa11.59□□□□□ -0.55
AC012409.1-202ENST00000558449 HS3ST6Q96QI5 342 aa11.59□□□□□ -0.55
AC012409.1-202ENST00000558449 GPR37L1O60883 481 aa11.58□□□□□ -0.56
AC012409.1-202ENST00000558449 EPS8L1Q8TE68 723 aa11.58□□□□□ -0.56
AC012409.1-202ENST00000558449 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.58□□□□□ -0.56
AC012409.1-202ENST00000558449 HDGFL1Q5TGJ6 251 aa11.57□□□□□ -0.56
AC012409.1-202ENST00000558449 ADGRD1Q6QNK2 874 aa11.57□□□□□ -0.56
AC012409.1-202ENST00000558449 RETREG3Q86VR2 466 aa11.57□□□□□ -0.56
AC012409.1-202ENST00000558449 FAM163AQ96GL9 167 aaPredicted RBP11.57□□□□□ -0.56
AC012409.1-202ENST00000558449 SLC27A5Q9Y2P5 690 aa11.57□□□□□ -0.56
AC012409.1-202ENST00000558449 Q3C1V9 767 aa11.55□□□□□ -0.56
AC012409.1-202ENST00000558449 PER1O15534 1290 aaPredicted RBP11.54□□□□□ -0.56
AC012409.1-202ENST00000558449 LSM11P83369 360 aaKnown RBP eCLIP11.54□□□□□ -0.56
AC012409.1-202ENST00000558449 VAC14Q08AM6 782 aa11.54□□□□□ -0.56
AC012409.1-202ENST00000558449 NR6A1Q15406 480 aa11.54□□□□□ -0.56
AC012409.1-202ENST00000558449 ADAMTS19Q8TE59 1207 aa11.54□□□□□ -0.56
AC012409.1-202ENST00000558449 HRO43593 1189 aa11.53□□□□□ -0.56
AC012409.1-202ENST00000558449 DESI1Q6ICB0 168 aa11.52□□□□□ -0.57
AC012409.1-202ENST00000558449 PRR14Q9BWN1 585 aa11.52□□□□□ -0.57
AC012409.1-202ENST00000558449 GOLGA8CPA6NN73 597 aa11.51□□□□□ -0.57
AC012409.1-202ENST00000558449 PPP1R15AO75807 674 aaPredicted RBP11.51□□□□□ -0.57
AC012409.1-202ENST00000558449 PPP4CP60510 307 aa11.51□□□□□ -0.57
AC012409.1-202ENST00000558449 ANKK1Q8NFD2 765 aa11.5□□□□□ -0.57
AC012409.1-202ENST00000558449 STAC3Q96MF2 364 aa11.5□□□□□ -0.57
AC012409.1-202ENST00000558449 TRAIPQ9BWF2 469 aa11.5□□□□□ -0.57
AC012409.1-202ENST00000558449 BLOC1S3Q6QNY0 202 aa11.49□□□□□ -0.57
AC012409.1-202ENST00000558449 LYPD8Q6UX82 237 aa11.49□□□□□ -0.57
AC012409.1-202ENST00000558449 RNF19BQ6ZMZ0 732 aa11.49□□□□□ -0.57
AC012409.1-202ENST00000558449 ALG2Q9H553 416 aa11.49□□□□□ -0.57
AC012409.1-202ENST00000558449 ACIN1Q9UKV3 1341 aaKnown RBP11.49□□□□□ -0.57
AC012409.1-202ENST00000558449 SOWAHBA6NEL2 793 aa11.48□□□□□ -0.57
AC012409.1-202ENST00000558449 HPS5Q9UPZ3 1129 aa11.48□□□□□ -0.57
AC012409.1-202ENST00000558449 ZBTB7CA1YPR0 619 aa11.47□□□□□ -0.57
AC012409.1-202ENST00000558449 BRICD5Q6PL45 260 aa11.47□□□□□ -0.57
AC012409.1-202ENST00000558449 RETREG2Q8NC44 543 aa11.47□□□□□ -0.57
AC012409.1-202ENST00000558449 USB1Q9BQ65 265 aaKnown RBP11.47□□□□□ -0.57
AC012409.1-202ENST00000558449 SALL2Q9Y467 1007 aaPredicted RBP11.47□□□□□ -0.57
AC012409.1-202ENST00000558449 BCAMP50895 628 aa11.46□□□□□ -0.57
AC012409.1-202ENST00000558449 APLP1P51693 650 aa11.46□□□□□ -0.57
AC012409.1-202ENST00000558449 ANKRD13DQ6ZTN6 518 aa11.46□□□□□ -0.57
AC012409.1-202ENST00000558449 SCUBE3Q8IX30 993 aa11.46□□□□□ -0.57
AC012409.1-202ENST00000558449 RFX1P22670 979 aa11.45□□□□□ -0.58
AC012409.1-202ENST00000558449 TSR3Q9UJK0 312 aaKnown RBP11.45□□□□□ -0.58
AC012409.1-202ENST00000558449 SOX11P35716 441 aa11.44□□□□□ -0.58
AC012409.1-202ENST00000558449 PNMA1Q8ND90 353 aa11.44□□□□□ -0.58
AC012409.1-202ENST00000558449 PPP1R12CQ9BZL4 782 aa11.44□□□□□ -0.58
AC012409.1-202ENST00000558449 PCDHB3Q9Y5E6 796 aa11.44□□□□□ -0.58
AC012409.1-202ENST00000558449 FMNL1O95466 1100 aaPredicted RBP11.43□□□□□ -0.58
AC012409.1-202ENST00000558449 CFAP70Q5T0N1 1121 aa11.43□□□□□ -0.58
AC012409.1-202ENST00000558449 NR1I2O75469 434 aa11.42□□□□□ -0.58
AC012409.1-202ENST00000558449 WNT2BQ93097 391 aa11.42□□□□□ -0.58
AC012409.1-202ENST00000558449 PBXIP1Q96AQ6 731 aa11.42□□□□□ -0.58
AC012409.1-202ENST00000558449 THAP11Q96EK4 314 aa11.42□□□□□ -0.58
AC012409.1-202ENST00000558449 SEMA3FQ13275 785 aa11.41□□□□□ -0.58
AC012409.1-202ENST00000558449 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.4□□□□□ -0.58
AC012409.1-202ENST00000558449 PALM3A6NDB9 673 aaPredicted RBP11.4□□□□□ -0.58
AC012409.1-202ENST00000558449 LCE2DQ5TA82 110 aaPredicted RBP11.4□□□□□ -0.58
AC012409.1-202ENST00000558449 JUNDP17535 347 aa11.39□□□□□ -0.59
AC012409.1-202ENST00000558449 SRPK2P78362 688 aaKnown RBP11.39□□□□□ -0.59
AC012409.1-202ENST00000558449 KCTD17Q8N5Z5 321 aa11.39□□□□□ -0.59
AC012409.1-202ENST00000558449 TFIP11Q9UBB9 837 aaKnown RBP11.39□□□□□ -0.59
AC012409.1-202ENST00000558449 F12P00748 615 aaPredicted RBP11.38□□□□□ -0.59
AC012409.1-202ENST00000558449 LMOD1P29536 600 aaPredicted RBP11.38□□□□□ -0.59
AC012409.1-202ENST00000558449 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
AC012409.1-202ENST00000558449 NR1H3Q13133 447 aa11.38□□□□□ -0.59
AC012409.1-202ENST00000558449 AEBP1Q8IUX7 1158 aa11.38□□□□□ -0.59
AC012409.1-202ENST00000558449 UCN2Q96RP3 112 aa11.38□□□□□ -0.59
AC012409.1-202ENST00000558449 FKBPLQ9UIM3 349 aa11.38□□□□□ -0.59
AC012409.1-202ENST00000558449 PTPRNQ16849 979 aa11.37□□□□□ -0.59
AC012409.1-202ENST00000558449 WBP1LQ9NX94 342 aa11.37□□□□□ -0.59
AC012409.1-202ENST00000558449 PDE4CQ08493 712 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms