RNA–Protein interactions for RNA: ENST00000557729.1

LINC01956-201, Transcript of long intergenic non-protein coding RNA 1956, humanhuman

TSL 5 BASIC

Gene LINC01956, Length 695 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01956-201ENST00000557729 ARHGEF28Q8N1W1 1705 aaKnown RBP28.69■■■□□ 2.18
LINC01956-201ENST00000557729 UBAP1LF5GYI3 381 aa28.69■■■□□ 2.18
LINC01956-201ENST00000557729 ATF3P18847 181 aa28.69■■■□□ 2.18
LINC01956-201ENST00000557729 CADPS2Q86UW7 1296 aa28.67■■■□□ 2.18
LINC01956-201ENST00000557729 NALCNQ8IZF0 1738 aa28.66■■■□□ 2.18
LINC01956-201ENST00000557729 DCCP43146 1447 aa28.66■■■□□ 2.18
LINC01956-201ENST00000557729 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.66■■■□□ 2.18
LINC01956-201ENST00000557729 CENPJQ9HC77 1338 aaPredicted RBP28.65■■■□□ 2.18
LINC01956-201ENST00000557729 MINK1Q8N4C8 1332 aaPredicted RBP28.62■■■□□ 2.17
LINC01956-201ENST00000557729 HIRIP3Q9BW71 556 aaPredicted RBP28.59■■■□□ 2.17
LINC01956-201ENST00000557729 CDC42BPGQ6DT37 1551 aa28.58■■■□□ 2.17
LINC01956-201ENST00000557729 SCAF1Q9H7N4 1312 aaKnown RBP28.58■■■□□ 2.17
LINC01956-201ENST00000557729 SLAIN2Q9P270 581 aa28.57■■■□□ 2.16
LINC01956-201ENST00000557729 PIP4K2BP78356 416 aa28.56■■■□□ 2.16
LINC01956-201ENST00000557729 FBXO41Q8TF61 875 aa28.56■■■□□ 2.16
LINC01956-201ENST00000557729 USP47Q96K76 1375 aa28.55■■■□□ 2.16
LINC01956-201ENST00000557729 QRICH2Q9H0J4 1663 aa28.54■■■□□ 2.16
LINC01956-201ENST00000557729 ADGRB2O60241 1585 aa28.54■■■□□ 2.16
LINC01956-201ENST00000557729 ILDR1Q86SU0 546 aaPredicted RBP28.53■■■□□ 2.16
LINC01956-201ENST00000557729 MST1RQ04912 1400 aa28.52■■■□□ 2.16
LINC01956-201ENST00000557729 WASLO00401 505 aaPredicted RBP28.51■■■□□ 2.15
LINC01956-201ENST00000557729 ZEB1P37275 1124 aaPredicted RBP28.51■■■□□ 2.15
LINC01956-201ENST00000557729 ST20-MTHFSA0A0A6YYL1 179 aa28.5■■■□□ 2.15
LINC01956-201ENST00000557729 NUTM2FA1L443 756 aa28.5■■■□□ 2.15
LINC01956-201ENST00000557729 FMN2Q9NZ56 1722 aa28.48■■■□□ 2.15
LINC01956-201ENST00000557729 C1orf167Q5SNV9 1468 aa28.47■■■□□ 2.15
LINC01956-201ENST00000557729 EIF4G2P78344 907 aaKnown RBP eCLIP28.47■■■□□ 2.15
LINC01956-201ENST00000557729 SBNO2Q9Y2G9 1366 aa28.47■■■□□ 2.15
LINC01956-201ENST00000557729 EVC2Q86UK5 1308 aa28.46■■■□□ 2.15
LINC01956-201ENST00000557729 CDK19Q9BWU1 502 aa28.46■■■□□ 2.15
LINC01956-201ENST00000557729 SLC24A1O60721 1099 aa28.45■■■□□ 2.14
LINC01956-201ENST00000557729 SRPK2P78362 688 aaKnown RBP28.44■■■□□ 2.14
LINC01956-201ENST00000557729 ESCO1Q5FWF5 840 aa28.43■■■□□ 2.14
LINC01956-201ENST00000557729 TULP4Q9NRJ4 1543 aa28.43■■■□□ 2.14
LINC01956-201ENST00000557729 ANKARQ7Z5J8 1434 aa28.43■■■□□ 2.14
LINC01956-201ENST00000557729 ROBO1Q9Y6N7 1651 aa28.42■■■□□ 2.14
LINC01956-201ENST00000557729 BRINP3Q76B58 766 aa28.41■■■□□ 2.14
LINC01956-201ENST00000557729 ORAI2Q96SN7 254 aa28.4■■■□□ 2.14
LINC01956-201ENST00000557729 HSPA5P11021 654 aaKnown RBP28.39■■■□□ 2.14
LINC01956-201ENST00000557729 TESK2Q96S53 571 aa28.39■■■□□ 2.14
LINC01956-201ENST00000557729 CABP2Q9NPB3 220 aa28.38■■■□□ 2.13
LINC01956-201ENST00000557729 NUDT16Q96DE0 195 aaKnown RBP28.37■■■□□ 2.13
LINC01956-201ENST00000557729 TMF1P82094 1093 aa28.36■■■□□ 2.13
LINC01956-201ENST00000557729 PRR36Q9H6K5 1346 aa28.36■■■□□ 2.13
LINC01956-201ENST00000557729 USP32Q8NFA0 1604 aa28.34■■■□□ 2.13
LINC01956-201ENST00000557729 PHF8Q9UPP1 1060 aa28.34■■■□□ 2.13
LINC01956-201ENST00000557729 ATP7BP35670 1465 aa28.34■■■□□ 2.13
LINC01956-201ENST00000557729 CCDC61Q9Y6R9 512 aa28.33■■■□□ 2.13
LINC01956-201ENST00000557729 RGPD8O14715 1765 aaPredicted RBP28.32■■■□□ 2.12
LINC01956-201ENST00000557729 ITSN1Q15811 1721 aa28.3■■■□□ 2.12
LINC01956-201ENST00000557729 KIF1AQ12756 1690 aa28.3■■■□□ 2.12
LINC01956-201ENST00000557729 ATAD2Q6PL18 1390 aa28.3■■■□□ 2.12
LINC01956-201ENST00000557729 PMFBP1Q8TBY8 1022 aa28.3■■■□□ 2.12
LINC01956-201ENST00000557729 CDCA8Q53HL2 280 aa28.29■■■□□ 2.12
LINC01956-201ENST00000557729 NPHP3Q7Z494 1330 aa28.28■■■□□ 2.12
LINC01956-201ENST00000557729 PUS7Q96PZ0 661 aaKnown RBP28.28■■■□□ 2.12
LINC01956-201ENST00000557729 FOXO3O43524 673 aa28.27■■■□□ 2.12
LINC01956-201ENST00000557729 HSPA1LP34931 641 aa28.27■■■□□ 2.12
LINC01956-201ENST00000557729 DISP3Q9P2K9 1392 aa28.26■■■□□ 2.12
LINC01956-201ENST00000557729 AHDC1Q5TGY3 1603 aaPredicted RBP28.26■■■□□ 2.11
LINC01956-201ENST00000557729 PPIP5K1Q6PFW1 1433 aa28.26■■■□□ 2.11
LINC01956-201ENST00000557729 NGDNQ8NEJ9 315 aaKnown RBP28.25■■■□□ 2.11
LINC01956-201ENST00000557729 DDX17Q92841 729 aaKnown RBP28.25■■■□□ 2.11
LINC01956-201ENST00000557729 PHLPP1O60346 1717 aa28.24■■■□□ 2.11
LINC01956-201ENST00000557729 TOPAZ1Q8N9V7 1692 aa28.24■■■□□ 2.11
LINC01956-201ENST00000557729 NHSL1Q5SYE7 1610 aa28.24■■■□□ 2.11
LINC01956-201ENST00000557729 CABP1Q9NZU7 370 aa28.23■■■□□ 2.11
LINC01956-201ENST00000557729 PLEKHG3A1L390 1219 aa28.22■■■□□ 2.11
LINC01956-201ENST00000557729 PSME1Q06323 249 aa28.22■■■□□ 2.11
LINC01956-201ENST00000557729 TMC1Q8TDI8 760 aa28.21■■■□□ 2.11
LINC01956-201ENST00000557729 XPCQ01831 940 aaPredicted RBP28.19■■■□□ 2.1
LINC01956-201ENST00000557729 KRT28Q7Z3Y7 464 aa28.19■■■□□ 2.1
LINC01956-201ENST00000557729 ACEP12821 1306 aa28.18■■■□□ 2.1
LINC01956-201ENST00000557729 SOS2Q07890 1332 aaPredicted RBP28.18■■■□□ 2.1
LINC01956-201ENST00000557729 POLR3GLQ9BT43 218 aa28.18■■■□□ 2.1
LINC01956-201ENST00000557729 LRRC59Q96AG4 307 aaKnown RBP28.17■■■□□ 2.1
LINC01956-201ENST00000557729 POLR3AO14802 1390 aaPredicted RBP28.16■■■□□ 2.1
LINC01956-201ENST00000557729 COL16A1Q07092 1604 aaPredicted RBP28.16■■■□□ 2.1
LINC01956-201ENST00000557729 NINLQ9Y2I6 1382 aa28.15■■■□□ 2.1
LINC01956-201ENST00000557729 PXDNQ92626 1479 aa28.15■■■□□ 2.1
LINC01956-201ENST00000557729 SLC12A5Q9H2X9 1139 aa28.13■■■□□ 2.09
LINC01956-201ENST00000557729 ZNF692Q9BU19 519 aaPredicted RBP28.12■■■□□ 2.09
LINC01956-201ENST00000557729 HDGFL2Q7Z4V5 671 aaPredicted RBP28.11■■■□□ 2.09
LINC01956-201ENST00000557729 TERF2IPQ9NYB0 399 aa28.11■■■□□ 2.09
LINC01956-201ENST00000557729 PAK3O75914 559 aaPredicted RBP28.09■■■□□ 2.09
LINC01956-201ENST00000557729 SBNO1A3KN83 1393 aa28.09■■■□□ 2.09
LINC01956-201ENST00000557729 JCADQ9P266 1359 aa28.09■■■□□ 2.09
LINC01956-201ENST00000557729 C11orf95C9JLR9 678 aaPredicted RBP28.07■■■□□ 2.08
LINC01956-201ENST00000557729 LMOD2Q6P5Q4 547 aa28.06■■■□□ 2.08
LINC01956-201ENST00000557729 SPATA31A3Q5VYP0 1347 aa28.06■■■□□ 2.08
LINC01956-201ENST00000557729 KTN1Q86UP2 1357 aaKnown RBP28.06■■■□□ 2.08
LINC01956-201ENST00000557729 TNS3Q68CZ2 1445 aa28.06■■■□□ 2.08
LINC01956-201ENST00000557729 BRD4O60885 1362 aaPredicted RBP28.05■■■□□ 2.08
LINC01956-201ENST00000557729 USP6P35125 1406 aa28.05■■■□□ 2.08
LINC01956-201ENST00000557729 CPSF1Q10570 1443 aaKnown RBP28.05■■■□□ 2.08
LINC01956-201ENST00000557729 KIF7Q2M1P5 1343 aa28.04■■■□□ 2.08
LINC01956-201ENST00000557729 AKAP12Q02952 1782 aa28.03■■■□□ 2.08
LINC01956-201ENST00000557729 CD163L1Q9NR16 1453 aa28.02■■■□□ 2.08
LINC01956-201ENST00000557729 A0A1W2PP64 1363 aa28.02■■■□□ 2.08
LINC01956-201ENST00000557729 PNPLA6Q8IY17 1366 aa28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms