RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 PPLO60437 1756 aa27.96■■■□□ 2.07
ABCD4-228ENST00000557588 MARF1Q9Y4F3 1742 aaKnown RBP27.96■■■□□ 2.07
ABCD4-228ENST00000557588 VGFO15240 615 aaPredicted RBP27.95■■■□□ 2.06
ABCD4-228ENST00000557588 NAIPQ13075 1403 aa27.94■■■□□ 2.06
ABCD4-228ENST00000557588 PXDNQ92626 1479 aa27.94■■■□□ 2.06
ABCD4-228ENST00000557588 RPGRIP1LQ68CZ1 1315 aa27.9■■■□□ 2.06
ABCD4-228ENST00000557588 BCL9LQ86UU0 1499 aa27.89■■■□□ 2.06
ABCD4-228ENST00000557588 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.89■■■□□ 2.05
ABCD4-228ENST00000557588 NPHP3Q7Z494 1330 aa27.89■■■□□ 2.05
ABCD4-228ENST00000557588 RRBP1Q9P2E9 1410 aaKnown RBP27.87■■■□□ 2.05
ABCD4-228ENST00000557588 FOXD1Q16676 465 aa27.85■■■□□ 2.05
ABCD4-228ENST00000557588 TECPR2O15040 1411 aa27.83■■■□□ 2.05
ABCD4-228ENST00000557588 ZRANB1Q9UGI0 708 aa27.82■■■□□ 2.04
ABCD4-228ENST00000557588 ESCO1Q5FWF5 840 aa27.81■■■□□ 2.04
ABCD4-228ENST00000557588 CCDC125Q86Z20 511 aa27.81■■■□□ 2.04
ABCD4-228ENST00000557588 KNDC1Q76NI1 1749 aa27.81■■■□□ 2.04
ABCD4-228ENST00000557588 LRPPRCP42704 1394 aaKnown RBP27.79■■■□□ 2.04
ABCD4-228ENST00000557588 PPARGC1BQ86YN6 1023 aaKnown RBP27.79■■■□□ 2.04
ABCD4-228ENST00000557588 KIF1AQ12756 1690 aa27.78■■■□□ 2.04
ABCD4-228ENST00000557588 GLI3P10071 1580 aa27.77■■■□□ 2.04
ABCD4-228ENST00000557588 FMN2Q9NZ56 1722 aa27.77■■■□□ 2.04
ABCD4-228ENST00000557588 IFT172Q9UG01 1749 aa27.77■■■□□ 2.04
ABCD4-228ENST00000557588 SLIT2O94813 1529 aa27.77■■■□□ 2.04
ABCD4-228ENST00000557588 GJD4Q96KN9 370 aaPredicted RBP27.76■■■□□ 2.03
ABCD4-228ENST00000557588 USP32Q8NFA0 1604 aa27.75■■■□□ 2.03
ABCD4-228ENST00000557588 FOXO3O43524 673 aa27.75■■■□□ 2.03
ABCD4-228ENST00000557588 XPCQ01831 940 aaPredicted RBP27.74■■■□□ 2.03
ABCD4-228ENST00000557588 RALGAPBQ86X10 1494 aa27.74■■■□□ 2.03
ABCD4-228ENST00000557588 SLC4A1APQ9BWU0 796 aaKnown RBP27.73■■■□□ 2.03
ABCD4-228ENST00000557588 CCDC144AA2RUR9 1427 aa27.71■■■□□ 2.03
ABCD4-228ENST00000557588 BLMP54132 1417 aaPredicted RBP27.71■■■□□ 2.03
ABCD4-228ENST00000557588 ADGRF5Q8IZF2 1346 aa27.7■■■□□ 2.03
ABCD4-228ENST00000557588 SPATA31E1Q6ZUB1 1445 aa27.69■■■□□ 2.02
ABCD4-228ENST00000557588 ABCC11Q96J66 1382 aa27.69■■■□□ 2.02
ABCD4-228ENST00000557588 BRWD3Q6RI45 1802 aa27.69■■■□□ 2.02
ABCD4-228ENST00000557588 SPATA31A3Q5VYP0 1347 aa27.68■■■□□ 2.02
ABCD4-228ENST00000557588 UNC5CLQ8IV45 518 aa27.68■■■□□ 2.02
ABCD4-228ENST00000557588 PLEKHH1Q9ULM0 1364 aa27.67■■■□□ 2.02
ABCD4-228ENST00000557588 PIK3C2GO75747 1445 aa27.67■■■□□ 2.02
ABCD4-228ENST00000557588 ANKRD30BQ9BXX2 1392 aa27.66■■■□□ 2.02
ABCD4-228ENST00000557588 WAPLQ7Z5K2 1190 aa27.66■■■□□ 2.02
ABCD4-228ENST00000557588 PLCH1Q4KWH8 1693 aa27.65■■■□□ 2.02
ABCD4-228ENST00000557588 ABCA3Q99758 1704 aa27.64■■■□□ 2.02
ABCD4-228ENST00000557588 NWD2Q9ULI1 1742 aa27.64■■■□□ 2.02
ABCD4-228ENST00000557588 NUTM2FA1L443 756 aa27.64■■■□□ 2.02
ABCD4-228ENST00000557588 STK26Q9P289 416 aa27.64■■■□□ 2.02
ABCD4-228ENST00000557588 TNS3Q68CZ2 1445 aa27.62■■■□□ 2.01
ABCD4-228ENST00000557588 YTHDC2Q9H6S0 1430 aaKnown RBP27.61■■■□□ 2.01
ABCD4-228ENST00000557588 LRP5O75197 1615 aa27.6■■■□□ 2.01
ABCD4-228ENST00000557588 RGPD8O14715 1765 aaPredicted RBP27.59■■■□□ 2.01
ABCD4-228ENST00000557588 TMEM132EQ6IEE7 984 aa27.57■■■□□ 2
ABCD4-228ENST00000557588 KRT28Q7Z3Y7 464 aa27.56■■■□□ 2
ABCD4-228ENST00000557588 VPS72Q15906 364 aa27.55■■■□□ 2
ABCD4-228ENST00000557588 NRXN1Q9ULB1 1477 aa27.55■■■□□ 2
ABCD4-228ENST00000557588 RGL3Q3MIN7 710 aa27.54■■■□□ 2
ABCD4-228ENST00000557588 SEPT12Q8IYM1 358 aa27.54■■■□□ 2
ABCD4-228ENST00000557588 SIRT1Q96EB6 747 aa27.54■■■□□ 2
ABCD4-228ENST00000557588 SBNO1A3KN83 1393 aa27.53■■■□□ 2
ABCD4-228ENST00000557588 DEFB132Q7Z7B7 95 aa27.53■■■□□ 2
ABCD4-228ENST00000557588 NRAPQ86VF7 1730 aa27.52■■■□□ 2
ABCD4-228ENST00000557588 ONECUT3O60422 494 aaPredicted RBP27.51■■□□□ 1.99
ABCD4-228ENST00000557588 PHF8Q9UPP1 1060 aa27.51■■□□□ 1.99
ABCD4-228ENST00000557588 ARHGEF10O15013 1369 aa27.5■■□□□ 1.99
ABCD4-228ENST00000557588 SF3B2Q13435 895 aaKnown RBP27.5■■□□□ 1.99
ABCD4-228ENST00000557588 HAP1P54257 671 aaPredicted RBP27.49■■□□□ 1.99
ABCD4-228ENST00000557588 PSME1Q06323 249 aa27.49■■□□□ 1.99
ABCD4-228ENST00000557588 CABLES1Q8TDN4 633 aa27.48■■□□□ 1.99
ABCD4-228ENST00000557588 ADGRB2O60241 1585 aa27.48■■□□□ 1.99
ABCD4-228ENST00000557588 ANKARQ7Z5J8 1434 aa27.46■■□□□ 1.99
ABCD4-228ENST00000557588 TRPM3Q9HCF6 1732 aaPredicted RBP27.46■■□□□ 1.99
ABCD4-228ENST00000557588 KRT27Q7Z3Y8 459 aa27.45■■□□□ 1.98
ABCD4-228ENST00000557588 C14orf93Q9H972 538 aaKnown RBP27.45■■□□□ 1.98
ABCD4-228ENST00000557588 DLC1Q96QB1 1528 aa27.45■■□□□ 1.98
ABCD4-228ENST00000557588 MPHOSPH9Q99550 1183 aa27.44■■□□□ 1.98
ABCD4-228ENST00000557588 CCDC9Q9Y3X0 531 aaKnown RBP27.42■■□□□ 1.98
ABCD4-228ENST00000557588 DHX57Q6P158 1386 aaKnown RBP27.42■■□□□ 1.98
ABCD4-228ENST00000557588 ALS2Q96Q42 1657 aa27.42■■□□□ 1.98
ABCD4-228ENST00000557588 COL14A1Q05707 1796 aaKnown RBP27.4■■□□□ 1.98
ABCD4-228ENST00000557588 RGPD1P0DJD0 1748 aa27.4■■□□□ 1.98
ABCD4-228ENST00000557588 FAM83GA6ND36 823 aa27.38■■□□□ 1.97
ABCD4-228ENST00000557588 PRAM1Q96QH2 718 aa27.38■■□□□ 1.97
ABCD4-228ENST00000557588 CRYBG1Q9Y4K1 1723 aa27.38■■□□□ 1.97
ABCD4-228ENST00000557588 LMOD2Q6P5Q4 547 aa27.37■■□□□ 1.97
ABCD4-228ENST00000557588 PLEKHG5O94827 1062 aa27.36■■□□□ 1.97
ABCD4-228ENST00000557588 BAG6P46379 1132 aa27.36■■□□□ 1.97
ABCD4-228ENST00000557588 CFAP70Q5T0N1 1121 aa27.36■■□□□ 1.97
ABCD4-228ENST00000557588 ADGRB1O14514 1584 aa27.35■■□□□ 1.97
ABCD4-228ENST00000557588 THSD7AQ9UPZ6 1657 aa27.35■■□□□ 1.97
ABCD4-228ENST00000557588 TNS1Q9HBL0 1735 aaKnown RBP27.33■■□□□ 1.97
ABCD4-228ENST00000557588 SAFB2Q14151 953 aaKnown RBP eCLIP27.33■■□□□ 1.97
ABCD4-228ENST00000557588 DISP2A7MBM2 1401 aa27.33■■□□□ 1.96
ABCD4-228ENST00000557588 A0A0G2JS52 829 aa27.32■■□□□ 1.96
ABCD4-228ENST00000557588 MYT1Q01538 1121 aa27.32■■□□□ 1.96
ABCD4-228ENST00000557588 FAM98CQ17RN3 349 aaKnown RBP27.32■■□□□ 1.96
ABCD4-228ENST00000557588 PMFBP1Q8TBY8 1022 aa27.32■■□□□ 1.96
ABCD4-228ENST00000557588 TULP4Q9NRJ4 1543 aa27.31■■□□□ 1.96
ABCD4-228ENST00000557588 PSDA5PKW4 1024 aaPredicted RBP27.31■■□□□ 1.96
ABCD4-228ENST00000557588 HRCP23327 699 aa27.31■■□□□ 1.96
ABCD4-228ENST00000557588 BTG4Q9NY30 223 aa27.31■■□□□ 1.96
ABCD4-228ENST00000557588 EIF3AQ14152 1382 aaKnown RBP27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms