RNA–Protein interactions for RNA: ENST00000557471.5

PAPOLA-225, Transcript of poly(A) polymerase alpha, human

TSL 1 (best) BASIC

Gene PAPOLA, Length 1,421 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAPOLA-225	ENST00000557471	SAFB2	Q14151	953 aa	Known RBP eCLIP	34.26	■■■■□ 3.07
PAPOLA-225	ENST00000557471	PLEKHH1	Q9ULM0	1364 aa		34.25	■■■■□ 3.07
PAPOLA-225	ENST00000557471	EIF3A	Q14152	1382 aa	Known RBP	34.23	■■■■□ 3.07
PAPOLA-225	ENST00000557471	DCC	P43146	1447 aa		34.22	■■■■□ 3.07
PAPOLA-225	ENST00000557471	FBXO41	Q8TF61	875 aa		34.2	■■■■□ 3.06
PAPOLA-225	ENST00000557471	CENPJ	Q9HC77	1338 aa	Predicted RBP	34.19	■■■■□ 3.06
PAPOLA-225	ENST00000557471	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	34.17	■■■■□ 3.06
PAPOLA-225	ENST00000557471	ARHGEF28	Q8N1W1	1705 aa	Known RBP	34.16	■■■■□ 3.06
PAPOLA-225	ENST00000557471	SLAIN2	Q9P270	581 aa		34.16	■■■■□ 3.06
PAPOLA-225	ENST00000557471	SCAF1	Q9H7N4	1312 aa	Known RBP	34.15	■■■■□ 3.06
PAPOLA-225	ENST00000557471	MINK1	Q8N4C8	1332 aa	Predicted RBP	34.15	■■■■□ 3.06
PAPOLA-225	ENST00000557471	NALCN	Q8IZF0	1738 aa		34.14	■■■■□ 3.06
PAPOLA-225	ENST00000557471	PIP4K2B	P78356	416 aa		34.13	■■■■□ 3.05
PAPOLA-225	ENST00000557471	HIRIP3	Q9BW71	556 aa	Predicted RBP	34.11	■■■■□ 3.05
PAPOLA-225	ENST00000557471	CDC42BPG	Q6DT37	1551 aa		34.08	■■■■□ 3.05
PAPOLA-225	ENST00000557471	WASL	O00401	505 aa	Predicted RBP	34.05	■■■■□ 3.04
PAPOLA-225	ENST00000557471	SLC24A1	O60721	1099 aa		34.04	■■■■□ 3.04
PAPOLA-225	ENST00000557471	MST1R	Q04912	1400 aa		34.03	■■■■□ 3.04
PAPOLA-225	ENST00000557471	USP47	Q96K76	1375 aa		34.02	■■■■□ 3.04
PAPOLA-225	ENST00000557471	ADGRB2	O60241	1585 aa		34.02	■■■■□ 3.04
PAPOLA-225	ENST00000557471	ST20-MTHFS	A0A0A6YYL1	179 aa		34	■■■■□ 3.03
PAPOLA-225	ENST00000557471	NUTM2F	A1L443	756 aa		34	■■■■□ 3.03
PAPOLA-225	ENST00000557471	EVC2	Q86UK5	1308 aa		33.99	■■■■□ 3.03
PAPOLA-225	ENST00000557471	ZEB1	P37275	1124 aa	Predicted RBP	33.99	■■■■□ 3.03
PAPOLA-225	ENST00000557471	QRICH2	Q9H0J4	1663 aa		33.99	■■■■□ 3.03
PAPOLA-225	ENST00000557471	C1orf167	Q5SNV9	1468 aa		33.98	■■■■□ 3.03
PAPOLA-225	ENST00000557471	CDK19	Q9BWU1	502 aa		33.98	■■■■□ 3.03
PAPOLA-225	ENST00000557471	SBNO2	Q9Y2G9	1366 aa		33.97	■■■■□ 3.03
PAPOLA-225	ENST00000557471	EIF4G2	P78344	907 aa	Known RBP eCLIP	33.96	■■■■□ 3.03
PAPOLA-225	ENST00000557471	ESCO1	Q5FWF5	840 aa		33.96	■■■■□ 3.03
PAPOLA-225	ENST00000557471	SRPK2	P78362	688 aa	Known RBP	33.95	■■■■□ 3.02
PAPOLA-225	ENST00000557471	BRINP3	Q76B58	766 aa		33.94	■■■■□ 3.02
PAPOLA-225	ENST00000557471	FMN2	Q9NZ56	1722 aa		33.93	■■■■□ 3.02
PAPOLA-225	ENST00000557471	ANKAR	Q7Z5J8	1434 aa		33.93	■■■■□ 3.02
PAPOLA-225	ENST00000557471	ORAI2	Q96SN7	254 aa		33.91	■■■■□ 3.02
PAPOLA-225	ENST00000557471	ROBO1	Q9Y6N7	1651 aa		33.89	■■■■□ 3.02
PAPOLA-225	ENST00000557471	TULP4	Q9NRJ4	1543 aa		33.89	■■■■□ 3.02
PAPOLA-225	ENST00000557471	NUDT16	Q96DE0	195 aa	Known RBP	33.88	■■■■□ 3.01
PAPOLA-225	ENST00000557471	ILDR1	Q86SU0	546 aa	Predicted RBP	33.87	■■■■□ 3.01
PAPOLA-225	ENST00000557471	TESK2	Q96S53	571 aa		33.87	■■■■□ 3.01
PAPOLA-225	ENST00000557471	CABP2	Q9NPB3	220 aa		33.86	■■■■□ 3.01
PAPOLA-225	ENST00000557471	TMF1	P82094	1093 aa		33.85	■■■■□ 3.01
PAPOLA-225	ENST00000557471	PHF8	Q9UPP1	1060 aa		33.85	■■■■□ 3.01
PAPOLA-225	ENST00000557471	CCDC61	Q9Y6R9	512 aa		33.85	■■■■□ 3.01
PAPOLA-225	ENST00000557471	HSPA5	P11021	654 aa	Known RBP	33.84	■■■■□ 3.01
PAPOLA-225	ENST00000557471	PRR36	Q9H6K5	1346 aa		33.82	■■■■□ 3
PAPOLA-225	ENST00000557471	CDCA8	Q53HL2	280 aa		33.8	■■■■□ 3
PAPOLA-225	ENST00000557471	HSPA1L	P34931	641 aa		33.79	■■■■□ 3
PAPOLA-225	ENST00000557471	PUS7	Q96PZ0	661 aa	Known RBP	33.79	■■■■□ 3
PAPOLA-225	ENST00000557471	NPHP3	Q7Z494	1330 aa		33.79	■■■■□ 3
PAPOLA-225	ENST00000557471	ATAD2	Q6PL18	1390 aa		33.78	■■■■□ 3
PAPOLA-225	ENST00000557471	ATP7B	P35670	1465 aa		33.78	■■■■□ 3
PAPOLA-225	ENST00000557471	FOXO3	O43524	673 aa		33.78	■■■■□ 3
PAPOLA-225	ENST00000557471	PMFBP1	Q8TBY8	1022 aa		33.78	■■■■□ 3
PAPOLA-225	ENST00000557471	USP32	Q8NFA0	1604 aa		33.76	■■■■□ 3
PAPOLA-225	ENST00000557471	NGDN	Q8NEJ9	315 aa	Known RBP	33.76	■■■□□ 2.99
PAPOLA-225	ENST00000557471	KIF1A	Q12756	1690 aa		33.75	■■■□□ 2.99
PAPOLA-225	ENST00000557471	RGPD8	O14715	1765 aa	Predicted RBP	33.74	■■■□□ 2.99
PAPOLA-225	ENST00000557471	PSME1	Q06323	249 aa		33.73	■■■□□ 2.99
PAPOLA-225	ENST00000557471	PLEKHG3	A1L390	1219 aa		33.72	■■■□□ 2.99
PAPOLA-225	ENST00000557471	ITSN1	Q15811	1721 aa		33.72	■■■□□ 2.99
PAPOLA-225	ENST00000557471	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.72	■■■□□ 2.99
PAPOLA-225	ENST00000557471	DDX17	Q92841	729 aa	Known RBP	33.71	■■■□□ 2.99
PAPOLA-225	ENST00000557471	PPIP5K1	Q6PFW1	1433 aa		33.71	■■■□□ 2.99
PAPOLA-225	ENST00000557471	CABP1	Q9NZU7	370 aa		33.7	■■■□□ 2.99
PAPOLA-225	ENST00000557471	PHLPP1	O60346	1717 aa		33.69	■■■□□ 2.98
PAPOLA-225	ENST00000557471	LRRC59	Q96AG4	307 aa	Known RBP	33.69	■■■□□ 2.98
PAPOLA-225	ENST00000557471	KRT28	Q7Z3Y7	464 aa		33.68	■■■□□ 2.98
PAPOLA-225	ENST00000557471	SOS2	Q07890	1332 aa	Predicted RBP	33.67	■■■□□ 2.98
PAPOLA-225	ENST00000557471	NHSL1	Q5SYE7	1610 aa		33.67	■■■□□ 2.98
PAPOLA-225	ENST00000557471	TMC1	Q8TDI8	760 aa		33.67	■■■□□ 2.98
PAPOLA-225	ENST00000557471	DISP3	Q9P2K9	1392 aa		33.67	■■■□□ 2.98
PAPOLA-225	ENST00000557471	ACE	P12821	1306 aa		33.66	■■■□□ 2.98
PAPOLA-225	ENST00000557471	XPC	Q01831	940 aa	Predicted RBP	33.63	■■■□□ 2.97
PAPOLA-225	ENST00000557471	TOPAZ1	Q8N9V7	1692 aa		33.62	■■■□□ 2.97
PAPOLA-225	ENST00000557471	POLR3A	O14802	1390 aa	Predicted RBP	33.62	■■■□□ 2.97
PAPOLA-225	ENST00000557471	ZNF692	Q9BU19	519 aa	Predicted RBP	33.62	■■■□□ 2.97
PAPOLA-225	ENST00000557471	NINL	Q9Y2I6	1382 aa		33.61	■■■□□ 2.97
PAPOLA-225	ENST00000557471	POLR3GL	Q9BT43	218 aa		33.58	■■■□□ 2.97
PAPOLA-225	ENST00000557471	TERF2IP	Q9NYB0	399 aa		33.58	■■■□□ 2.97
PAPOLA-225	ENST00000557471	COL16A1	Q07092	1604 aa	Predicted RBP	33.58	■■■□□ 2.97
PAPOLA-225	ENST00000557471	JCAD	Q9P266	1359 aa		33.58	■■■□□ 2.97
PAPOLA-225	ENST00000557471	PXDN	Q92626	1479 aa		33.57	■■■□□ 2.97
PAPOLA-225	ENST00000557471	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.57	■■■□□ 2.96
PAPOLA-225	ENST00000557471	SLC12A5	Q9H2X9	1139 aa		33.57	■■■□□ 2.96
PAPOLA-225	ENST00000557471	PAK3	O75914	559 aa	Predicted RBP	33.55	■■■□□ 2.96
PAPOLA-225	ENST00000557471	SBNO1	A3KN83	1393 aa		33.55	■■■□□ 2.96
PAPOLA-225	ENST00000557471	BRD4	O60885	1362 aa	Predicted RBP	33.53	■■■□□ 2.96
PAPOLA-225	ENST00000557471	SPATA31A3	Q5VYP0	1347 aa		33.53	■■■□□ 2.96
PAPOLA-225	ENST00000557471	LMOD2	Q6P5Q4	547 aa		33.53	■■■□□ 2.96
PAPOLA-225	ENST00000557471	KTN1	Q86UP2	1357 aa	Known RBP	33.49	■■■□□ 2.95
PAPOLA-225	ENST00000557471	TNS3	Q68CZ2	1445 aa		33.48	■■■□□ 2.95
PAPOLA-225	ENST00000557471	ARHGEF10	O15013	1369 aa		33.48	■■■□□ 2.95
PAPOLA-225	ENST00000557471	USP6	P35125	1406 aa		33.47	■■■□□ 2.95
PAPOLA-225	ENST00000557471	CPSF1	Q10570	1443 aa	Known RBP	33.47	■■■□□ 2.95
PAPOLA-225	ENST00000557471	C11orf95	C9JLR9	678 aa	Predicted RBP	33.45	■■■□□ 2.95
PAPOLA-225	ENST00000557471	SPATA31A6	Q5VVP1	1343 aa		33.45	■■■□□ 2.95
PAPOLA-225	ENST00000557471	PNPLA6	Q8IY17	1366 aa		33.44	■■■□□ 2.94
PAPOLA-225	ENST00000557471	ANKRD36B	Q8N2N9	1353 aa		33.43	■■■□□ 2.94
PAPOLA-225	ENST00000557471	ABTB2	Q8N961	1025 aa		33.42	■■■□□ 2.94

Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms