RNA–Protein interactions for RNA: ENST00000557181.5

APEX1-217, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-217ENST00000557181 SIRT1Q96EB6 747 aa18.08■□□□□ 0.48
APEX1-217ENST00000557181 EIF3AQ14152 1382 aaKnown RBP18.07■□□□□ 0.48
APEX1-217ENST00000557181 NALCNQ8IZF0 1738 aa18.07■□□□□ 0.48
APEX1-217ENST00000557181 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.07■□□□□ 0.48
APEX1-217ENST00000557181 PIP4K2BP78356 416 aa18.07■□□□□ 0.48
APEX1-217ENST00000557181 CARD11Q9BXL7 1154 aa18.07■□□□□ 0.48
APEX1-217ENST00000557181 ARHGEF28Q8N1W1 1705 aaKnown RBP18.06■□□□□ 0.48
APEX1-217ENST00000557181 DCCP43146 1447 aa18.06■□□□□ 0.48
APEX1-217ENST00000557181 PLEKHH1Q9ULM0 1364 aa18.04■□□□□ 0.48
APEX1-217ENST00000557181 MINK1Q8N4C8 1332 aaPredicted RBP18.01■□□□□ 0.47
APEX1-217ENST00000557181 CENPJQ9HC77 1338 aaPredicted RBP18.01■□□□□ 0.47
APEX1-217ENST00000557181 CDC42BPGQ6DT37 1551 aa18.01■□□□□ 0.47
APEX1-217ENST00000557181 GPRASP1Q5JY77 1395 aa18.01■□□□□ 0.47
APEX1-217ENST00000557181 SLAIN2Q9P270 581 aa18■□□□□ 0.47
APEX1-217ENST00000557181 HIRIP3Q9BW71 556 aaPredicted RBP17.98■□□□□ 0.47
APEX1-217ENST00000557181 QRICH2Q9H0J4 1663 aa17.98■□□□□ 0.47
APEX1-217ENST00000557181 ADGRB2O60241 1585 aa17.96■□□□□ 0.47
APEX1-217ENST00000557181 NUTM2FA1L443 756 aa17.95■□□□□ 0.46
APEX1-217ENST00000557181 ROBO1Q9Y6N7 1651 aa17.95■□□□□ 0.46
APEX1-217ENST00000557181 MST1RQ04912 1400 aa17.95■□□□□ 0.46
APEX1-217ENST00000557181 FMN2Q9NZ56 1722 aa17.95■□□□□ 0.46
APEX1-217ENST00000557181 C1orf167Q5SNV9 1468 aa17.93■□□□□ 0.46
APEX1-217ENST00000557181 USP47Q96K76 1375 aa17.92■□□□□ 0.46
APEX1-217ENST00000557181 WASLO00401 505 aaPredicted RBP17.92■□□□□ 0.46
APEX1-217ENST00000557181 ESCO1Q5FWF5 840 aa17.92■□□□□ 0.46
APEX1-217ENST00000557181 ILDR1Q86SU0 546 aaPredicted RBP17.92■□□□□ 0.46
APEX1-217ENST00000557181 SRPK2P78362 688 aaKnown RBP17.91■□□□□ 0.46
APEX1-217ENST00000557181 EVC2Q86UK5 1308 aa17.91■□□□□ 0.46
APEX1-217ENST00000557181 ANKARQ7Z5J8 1434 aa17.89■□□□□ 0.46
APEX1-217ENST00000557181 TULP4Q9NRJ4 1543 aa17.89■□□□□ 0.45
APEX1-217ENST00000557181 BRINP3Q76B58 766 aa17.89■□□□□ 0.45
APEX1-217ENST00000557181 CDK19Q9BWU1 502 aa17.89■□□□□ 0.45
APEX1-217ENST00000557181 SLC24A1O60721 1099 aa17.88■□□□□ 0.45
APEX1-217ENST00000557181 ST20-MTHFSA0A0A6YYL1 179 aa17.87■□□□□ 0.45
APEX1-217ENST00000557181 KIF1AQ12756 1690 aa17.87■□□□□ 0.45
APEX1-217ENST00000557181 PHLPP1O60346 1717 aa17.86■□□□□ 0.45
APEX1-217ENST00000557181 ITSN1Q15811 1721 aa17.86■□□□□ 0.45
APEX1-217ENST00000557181 EIF4G2P78344 907 aaKnown RBP eCLIP17.86■□□□□ 0.45
APEX1-217ENST00000557181 ORAI2Q96SN7 254 aa17.86■□□□□ 0.45
APEX1-217ENST00000557181 RGPD8O14715 1765 aaPredicted RBP17.85■□□□□ 0.45
APEX1-217ENST00000557181 HSPA1LP34931 641 aa17.85■□□□□ 0.45
APEX1-217ENST00000557181 SBNO2Q9Y2G9 1366 aa17.85■□□□□ 0.45
APEX1-217ENST00000557181 NUDT16Q96DE0 195 aaKnown RBP17.84■□□□□ 0.45
APEX1-217ENST00000557181 PHF8Q9UPP1 1060 aa17.84■□□□□ 0.45
APEX1-217ENST00000557181 NPHP3Q7Z494 1330 aa17.83■□□□□ 0.44
APEX1-217ENST00000557181 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.44
APEX1-217ENST00000557181 CABP2Q9NPB3 220 aa17.83■□□□□ 0.44
APEX1-217ENST00000557181 AHDC1Q5TGY3 1603 aaPredicted RBP17.83■□□□□ 0.44
APEX1-217ENST00000557181 TMF1P82094 1093 aa17.82■□□□□ 0.44
APEX1-217ENST00000557181 USP32Q8NFA0 1604 aa17.82■□□□□ 0.44
APEX1-217ENST00000557181 ATP7BP35670 1465 aa17.82■□□□□ 0.44
APEX1-217ENST00000557181 NHSL1Q5SYE7 1610 aa17.81■□□□□ 0.44
APEX1-217ENST00000557181 NGDNQ8NEJ9 315 aaKnown RBP17.81■□□□□ 0.44
APEX1-217ENST00000557181 PMFBP1Q8TBY8 1022 aa17.81■□□□□ 0.44
APEX1-217ENST00000557181 ATAD2Q6PL18 1390 aa17.8■□□□□ 0.44
APEX1-217ENST00000557181 PRR36Q9H6K5 1346 aa17.8■□□□□ 0.44
APEX1-217ENST00000557181 FOXO3O43524 673 aa17.8■□□□□ 0.44
APEX1-217ENST00000557181 CCDC61Q9Y6R9 512 aa17.8■□□□□ 0.44
APEX1-217ENST00000557181 PSME1Q06323 249 aa17.79■□□□□ 0.44
APEX1-217ENST00000557181 CDCA8Q53HL2 280 aa17.79■□□□□ 0.44
APEX1-217ENST00000557181 DDX17Q92841 729 aaKnown RBP17.79■□□□□ 0.44
APEX1-217ENST00000557181 HSPA5P11021 654 aaKnown RBP17.78■□□□□ 0.44
APEX1-217ENST00000557181 PPIP5K1Q6PFW1 1433 aa17.78■□□□□ 0.44
APEX1-217ENST00000557181 TOPAZ1Q8N9V7 1692 aa17.77■□□□□ 0.44
APEX1-217ENST00000557181 TESK2Q96S53 571 aa17.77■□□□□ 0.44
APEX1-217ENST00000557181 COL16A1Q07092 1604 aaPredicted RBP17.76■□□□□ 0.43
APEX1-217ENST00000557181 XPCQ01831 940 aaPredicted RBP17.76■□□□□ 0.43
APEX1-217ENST00000557181 TMC1Q8TDI8 760 aa17.76■□□□□ 0.43
APEX1-217ENST00000557181 LRRC59Q96AG4 307 aaKnown RBP17.76■□□□□ 0.43
APEX1-217ENST00000557181 KRT28Q7Z3Y7 464 aa17.75■□□□□ 0.43
APEX1-217ENST00000557181 POLR3GLQ9BT43 218 aa17.74■□□□□ 0.43
APEX1-217ENST00000557181 JCADQ9P266 1359 aa17.74■□□□□ 0.43
APEX1-217ENST00000557181 CABP1Q9NZU7 370 aa17.73■□□□□ 0.43
APEX1-217ENST00000557181 DISP3Q9P2K9 1392 aa17.73■□□□□ 0.43
APEX1-217ENST00000557181 ACEP12821 1306 aa17.72■□□□□ 0.43
APEX1-217ENST00000557181 SOS2Q07890 1332 aaPredicted RBP17.72■□□□□ 0.43
APEX1-217ENST00000557181 PLEKHG3A1L390 1219 aa17.72■□□□□ 0.43
APEX1-217ENST00000557181 PAK3O75914 559 aaPredicted RBP17.72■□□□□ 0.43
APEX1-217ENST00000557181 LMOD2Q6P5Q4 547 aa17.72■□□□□ 0.43
APEX1-217ENST00000557181 PUS7Q96PZ0 661 aaKnown RBP17.72■□□□□ 0.43
APEX1-217ENST00000557181 PXDNQ92626 1479 aa17.71■□□□□ 0.43
APEX1-217ENST00000557181 NINLQ9Y2I6 1382 aa17.7■□□□□ 0.42
APEX1-217ENST00000557181 HDGFL2Q7Z4V5 671 aaPredicted RBP17.7■□□□□ 0.42
APEX1-217ENST00000557181 POLR3AO14802 1390 aaPredicted RBP17.69■□□□□ 0.42
APEX1-217ENST00000557181 SHPRHQ149N8 1683 aa17.69■□□□□ 0.42
APEX1-217ENST00000557181 TERF2IPQ9NYB0 399 aa17.69■□□□□ 0.42
APEX1-217ENST00000557181 SBNO1A3KN83 1393 aa17.68■□□□□ 0.42
APEX1-217ENST00000557181 TNS3Q68CZ2 1445 aa17.68■□□□□ 0.42
APEX1-217ENST00000557181 ARHGEF10O15013 1369 aa17.67■□□□□ 0.42
APEX1-217ENST00000557181 HAP1P54257 671 aaPredicted RBP17.67■□□□□ 0.42
APEX1-217ENST00000557181 ZNF692Q9BU19 519 aaPredicted RBP17.67■□□□□ 0.42
APEX1-217ENST00000557181 SPATA31A6Q5VVP1 1343 aa17.66■□□□□ 0.42
APEX1-217ENST00000557181 SPATA31A3Q5VYP0 1347 aa17.66■□□□□ 0.42
APEX1-217ENST00000557181 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
APEX1-217ENST00000557181 PNPLA6Q8IY17 1366 aa17.66■□□□□ 0.42
APEX1-217ENST00000557181 NUTM2BA6NNL0 878 aaPredicted RBP17.65■□□□□ 0.42
APEX1-217ENST00000557181 NUTM2EB1AL46 878 aaPredicted RBP17.65■□□□□ 0.42
APEX1-217ENST00000557181 PLEKHG5O94827 1062 aa17.65■□□□□ 0.42
APEX1-217ENST00000557181 MEX3CQ5U5Q3 659 aaKnown RBP17.65■□□□□ 0.42
APEX1-217ENST00000557181 NUTM2AQ8IVF1 878 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms