RNA–Protein interactions for RNA: ENST00000556908.5

COCH-210, Transcript of cochlin, humanhuman

TSL 3

Gene COCH, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-210ENST00000556908 YTHDC2Q9H6S0 1430 aaKnown RBP28.59■■■□□ 2.17
COCH-210ENST00000556908 MYOM2P54296 1465 aa28.59■■■□□ 2.17
COCH-210ENST00000556908 SOS2Q07890 1332 aaPredicted RBP28.56■■■□□ 2.16
COCH-210ENST00000556908 NHSL1Q5SYE7 1610 aa28.55■■■□□ 2.16
COCH-210ENST00000556908 SHPRHQ149N8 1683 aa28.52■■■□□ 2.16
COCH-210ENST00000556908 DHX57Q6P158 1386 aaKnown RBP28.51■■■□□ 2.16
COCH-210ENST00000556908 PNPLA6Q8IY17 1366 aa28.5■■■□□ 2.15
COCH-210ENST00000556908 NUTM2BA6NNL0 878 aaPredicted RBP28.5■■■□□ 2.15
COCH-210ENST00000556908 NUTM2EB1AL46 878 aaPredicted RBP28.5■■■□□ 2.15
COCH-210ENST00000556908 ESCO1Q5FWF5 840 aa28.5■■■□□ 2.15
COCH-210ENST00000556908 NUTM2AQ8IVF1 878 aaPredicted RBP28.5■■■□□ 2.15
COCH-210ENST00000556908 DCAF11Q8TEB1 546 aa28.5■■■□□ 2.15
COCH-210ENST00000556908 KDM2AQ9Y2K7 1162 aa28.5■■■□□ 2.15
COCH-210ENST00000556908 LAMC1P11047 1609 aa28.49■■■□□ 2.15
COCH-210ENST00000556908 CDC42BPGQ6DT37 1551 aa28.48■■■□□ 2.15
COCH-210ENST00000556908 STAC3Q96MF2 364 aa28.47■■■□□ 2.15
COCH-210ENST00000556908 NUTM2FA1L443 756 aa28.46■■■□□ 2.15
COCH-210ENST00000556908 MEX3CQ5U5Q3 659 aaKnown RBP28.46■■■□□ 2.15
COCH-210ENST00000556908 PRAM1Q96QH2 718 aa28.45■■■□□ 2.14
COCH-210ENST00000556908 KNDC1Q76NI1 1749 aa28.45■■■□□ 2.14
COCH-210ENST00000556908 ADGRB1O14514 1584 aa28.43■■■□□ 2.14
COCH-210ENST00000556908 FOXO3O43524 673 aa28.43■■■□□ 2.14
COCH-210ENST00000556908 ZNF772Q68DY9 489 aaPredicted RBP28.42■■■□□ 2.14
COCH-210ENST00000556908 NPHP3Q7Z494 1330 aa28.41■■■□□ 2.14
COCH-210ENST00000556908 SAFB2Q14151 953 aaKnown RBP eCLIP28.39■■■□□ 2.14
COCH-210ENST00000556908 TRAK1Q9UPV9 953 aa28.38■■■□□ 2.13
COCH-210ENST00000556908 PXDNQ92626 1479 aa28.37■■■□□ 2.13
COCH-210ENST00000556908 DLC1Q96QB1 1528 aa28.37■■■□□ 2.13
COCH-210ENST00000556908 XPCQ01831 940 aaPredicted RBP28.36■■■□□ 2.13
COCH-210ENST00000556908 AFF2P51816 1311 aa28.36■■■□□ 2.13
COCH-210ENST00000556908 POGKQ9P215 609 aa28.34■■■□□ 2.13
COCH-210ENST00000556908 C8orf37Q96NL8 207 aa28.33■■■□□ 2.13
COCH-210ENST00000556908 ADAMTS2O95450 1211 aa28.32■■■□□ 2.12
COCH-210ENST00000556908 FMN2Q9NZ56 1722 aa28.3■■■□□ 2.12
COCH-210ENST00000556908 PHF8Q9UPP1 1060 aa28.3■■■□□ 2.12
COCH-210ENST00000556908 RXRBP28702 533 aa28.28■■■□□ 2.12
COCH-210ENST00000556908 KRT28Q7Z3Y7 464 aa28.28■■■□□ 2.12
COCH-210ENST00000556908 SPATA31A3Q5VYP0 1347 aa28.27■■■□□ 2.12
COCH-210ENST00000556908 NGLY1Q96IV0 654 aa28.27■■■□□ 2.12
COCH-210ENST00000556908 HIRIP3Q9BW71 556 aaPredicted RBP28.27■■■□□ 2.12
COCH-210ENST00000556908 FNBP4Q8N3X1 1017 aaPredicted RBP28.26■■■□□ 2.11
COCH-210ENST00000556908 QTRT2Q9H974 415 aaKnown RBP28.26■■■□□ 2.11
COCH-210ENST00000556908 MINK1Q8N4C8 1332 aaPredicted RBP28.24■■■□□ 2.11
COCH-210ENST00000556908 NBPF1Q3BBV0 1214 aa28.24■■■□□ 2.11
COCH-210ENST00000556908 PRR36Q9H6K5 1346 aa28.23■■■□□ 2.11
COCH-210ENST00000556908 COL22A1Q8NFW1 1626 aaPredicted RBP28.23■■■□□ 2.11
COCH-210ENST00000556908 WASLO00401 505 aaPredicted RBP28.23■■■□□ 2.11
COCH-210ENST00000556908 SIN3AQ96ST3 1273 aa28.21■■■□□ 2.11
COCH-210ENST00000556908 ANKARQ7Z5J8 1434 aa28.2■■■□□ 2.11
COCH-210ENST00000556908 PMFBP1Q8TBY8 1022 aa28.2■■■□□ 2.1
COCH-210ENST00000556908 ADGRB2O60241 1585 aa28.2■■■□□ 2.1
COCH-210ENST00000556908 RBM6P78332 1123 aaKnown RBP28.18■■■□□ 2.1
COCH-210ENST00000556908 L3MBTL2Q969R5 705 aa28.18■■■□□ 2.1
COCH-210ENST00000556908 USP21Q9UK80 565 aa28.18■■■□□ 2.1
COCH-210ENST00000556908 USP32Q8NFA0 1604 aa28.18■■■□□ 2.1
COCH-210ENST00000556908 PSME1Q06323 249 aa28.17■■■□□ 2.1
COCH-210ENST00000556908 RGPD8O14715 1765 aaPredicted RBP28.16■■■□□ 2.1
COCH-210ENST00000556908 KIF1AQ12756 1690 aa28.16■■■□□ 2.1
COCH-210ENST00000556908 CDK12Q9NYV4 1490 aaPredicted RBP28.15■■■□□ 2.1
COCH-210ENST00000556908 SBNO1A3KN83 1393 aa28.15■■■□□ 2.1
COCH-210ENST00000556908 BCL9LQ86UU0 1499 aa28.13■■■□□ 2.09
COCH-210ENST00000556908 TNS3Q68CZ2 1445 aa28.11■■■□□ 2.09
COCH-210ENST00000556908 CABLES1Q8TDN4 633 aa28.11■■■□□ 2.09
COCH-210ENST00000556908 UPF1Q92900 1129 aaKnown RBP eCLIP28.11■■■□□ 2.09
COCH-210ENST00000556908 TRPC5Q9UL62 973 aaPredicted RBP28.11■■■□□ 2.09
COCH-210ENST00000556908 TULP4Q9NRJ4 1543 aa28.09■■■□□ 2.09
COCH-210ENST00000556908 NUDT16Q96DE0 195 aaKnown RBP28.09■■■□□ 2.09
COCH-210ENST00000556908 CDK19Q9BWU1 502 aa28.09■■■□□ 2.09
COCH-210ENST00000556908 ATRNO75882 1429 aa28.09■■■□□ 2.09
COCH-210ENST00000556908 EIF3AQ14152 1382 aaKnown RBP28.08■■■□□ 2.09
COCH-210ENST00000556908 NEUROD1Q13562 356 aa28.07■■■□□ 2.08
COCH-210ENST00000556908 RGS12O14924 1447 aa28.07■■■□□ 2.08
COCH-210ENST00000556908 ARHGEF28Q8N1W1 1705 aaKnown RBP28.06■■■□□ 2.08
COCH-210ENST00000556908 KIAA1210Q9ULL0 1709 aa28.06■■■□□ 2.08
COCH-210ENST00000556908 ARHGEF10O15013 1369 aa28.03■■■□□ 2.08
COCH-210ENST00000556908 LMOD2Q6P5Q4 547 aa28.03■■■□□ 2.08
COCH-210ENST00000556908 SLIT2O94813 1529 aa28.02■■■□□ 2.08
COCH-210ENST00000556908 ATP7BP35670 1465 aa28.02■■■□□ 2.08
COCH-210ENST00000556908 UNC5CLQ8IV45 518 aa28.02■■■□□ 2.08
COCH-210ENST00000556908 NGDNQ8NEJ9 315 aaKnown RBP28.02■■■□□ 2.08
COCH-210ENST00000556908 GPRASP1Q5JY77 1395 aa28■■■□□ 2.07
COCH-210ENST00000556908 GJD4Q96KN9 370 aaPredicted RBP28■■■□□ 2.07
COCH-210ENST00000556908 CCDC61Q9Y6R9 512 aa28■■■□□ 2.07
COCH-210ENST00000556908 PLEKHG3A1L390 1219 aa27.99■■■□□ 2.07
COCH-210ENST00000556908 FAM83GA6ND36 823 aa27.99■■■□□ 2.07
COCH-210ENST00000556908 PLEKHG5O94827 1062 aa27.99■■■□□ 2.07
COCH-210ENST00000556908 CENPJQ9HC77 1338 aaPredicted RBP27.98■■■□□ 2.07
COCH-210ENST00000556908 NBPF8Q3BBV2 869 aa27.97■■■□□ 2.07
COCH-210ENST00000556908 TRPM3Q9HCF6 1732 aaPredicted RBP27.97■■■□□ 2.07
COCH-210ENST00000556908 MARF1Q9Y4F3 1742 aaKnown RBP27.95■■■□□ 2.07
COCH-210ENST00000556908 TRIM26Q12899 539 aaPredicted RBP27.95■■■□□ 2.06
COCH-210ENST00000556908 POLR3AO14802 1390 aaPredicted RBP27.95■■■□□ 2.06
COCH-210ENST00000556908 ACEP12821 1306 aa27.94■■■□□ 2.06
COCH-210ENST00000556908 EP400Q96L91 3159 aa27.93■■■□□ 2.06
COCH-210ENST00000556908 HAP1P54257 671 aaPredicted RBP27.93■■■□□ 2.06
COCH-210ENST00000556908 CABP2Q9NPB3 220 aa27.92■■■□□ 2.06
COCH-210ENST00000556908 PAK3O75914 559 aaPredicted RBP27.91■■■□□ 2.06
COCH-210ENST00000556908 ALS2Q96Q42 1657 aa27.91■■■□□ 2.06
COCH-210ENST00000556908 VPS72Q15906 364 aa27.9■■■□□ 2.06
COCH-210ENST00000556908 RALGAPBQ86X10 1494 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms