RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, humanhuman

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1-215ENST00000556839 CD46P15529 392 aa12.06□□□□□ -0.48
RALGAPA1-215ENST00000556839 TREML4Q6UXN2 200 aa12.05□□□□□ -0.48
RALGAPA1-215ENST00000556839 WNT7AO00755 349 aa12.04□□□□□ -0.48
RALGAPA1-215ENST00000556839 TRIM32Q13049 653 aa12.04□□□□□ -0.48
RALGAPA1-215ENST00000556839 MAP2K5Q13163 448 aa12.04□□□□□ -0.48
RALGAPA1-215ENST00000556839 GMPR2Q9P2T1 348 aaKnown RBP12.04□□□□□ -0.48
RALGAPA1-215ENST00000556839 C11orf95C9JLR9 678 aaPredicted RBP12.03□□□□□ -0.48
RALGAPA1-215ENST00000556839 KDM4AO75164 1064 aa12.03□□□□□ -0.48
RALGAPA1-215ENST00000556839 MMP16P51512 607 aa12.03□□□□□ -0.48
RALGAPA1-215ENST00000556839 HAP1P54257 671 aaPredicted RBP12.03□□□□□ -0.48
RALGAPA1-215ENST00000556839 SMCPP49901 116 aaPredicted RBP12.02□□□□□ -0.49
RALGAPA1-215ENST00000556839 SNIP1Q8TAD8 396 aaKnown RBP12.01□□□□□ -0.49
RALGAPA1-215ENST00000556839 USB1Q9BQ65 265 aaKnown RBP12.01□□□□□ -0.49
RALGAPA1-215ENST00000556839 TULP1O00294 542 aaPredicted RBP12□□□□□ -0.49
RALGAPA1-215ENST00000556839 DXOO77932 396 aaKnown RBP11.98□□□□□ -0.49
RALGAPA1-215ENST00000556839 USP46P62068 366 aa11.98□□□□□ -0.49
RALGAPA1-215ENST00000556839 MDM2Q00987 491 aaPredicted RBP11.98□□□□□ -0.49
RALGAPA1-215ENST00000556839 MRGPRX2Q96LB1 330 aa11.98□□□□□ -0.49
RALGAPA1-215ENST00000556839 REPIN1Q9BWE0 567 aaKnown RBP11.98□□□□□ -0.49
RALGAPA1-215ENST00000556839 SMPD1P17405 629 aa11.97□□□□□ -0.49
RALGAPA1-215ENST00000556839 LCE2AQ5TA79 106 aaPredicted RBP11.97□□□□□ -0.49
RALGAPA1-215ENST00000556839 CCDC24Q8N4L8 307 aa11.97□□□□□ -0.49
RALGAPA1-215ENST00000556839 HLA-CQ95604 372 aa11.96□□□□□ -0.49
RALGAPA1-215ENST00000556839 IRF6O14896 467 aa11.95□□□□□ -0.5
RALGAPA1-215ENST00000556839 WFS1O76024 890 aa11.95□□□□□ -0.5
RALGAPA1-215ENST00000556839 HOXA2O43364 376 aa11.94□□□□□ -0.5
RALGAPA1-215ENST00000556839 J3QL48 77 aa11.93□□□□□ -0.5
RALGAPA1-215ENST00000556839 ATP13A2Q9NQ11 1180 aa11.93□□□□□ -0.5
RALGAPA1-215ENST00000556839 MINK1Q8N4C8 1332 aaPredicted RBP11.93□□□□□ -0.5
RALGAPA1-215ENST00000556839 KDM2AQ9Y2K7 1162 aa11.91□□□□□ -0.5
RALGAPA1-215ENST00000556839 CCDC102AQ96A19 550 aa11.9□□□□□ -0.5
RALGAPA1-215ENST00000556839 WNT7BP56706 349 aa11.89□□□□□ -0.51
RALGAPA1-215ENST00000556839 GUCA2AQ02747 115 aa11.89□□□□□ -0.51
RALGAPA1-215ENST00000556839 RC3H1Q5TC82 1133 aaKnown RBP11.89□□□□□ -0.51
RALGAPA1-215ENST00000556839 SENP2Q9HC62 589 aa11.89□□□□□ -0.51
RALGAPA1-215ENST00000556839 GPCPD1Q9NPB8 672 aa11.89□□□□□ -0.51
RALGAPA1-215ENST00000556839 JUNDP17535 347 aa11.87□□□□□ -0.51
RALGAPA1-215ENST00000556839 CLCN1P35523 988 aa11.87□□□□□ -0.51
RALGAPA1-215ENST00000556839 SKOR1P84550 965 aa11.87□□□□□ -0.51
RALGAPA1-215ENST00000556839 NFX1Q12986 1120 aaKnown RBP11.87□□□□□ -0.51
RALGAPA1-215ENST00000556839 HPS1Q92902 700 aa11.87□□□□□ -0.51
RALGAPA1-215ENST00000556839 TRIM47Q96LD4 638 aa11.86□□□□□ -0.51
RALGAPA1-215ENST00000556839 SNRPBP14678 240 aaKnown RBP11.86□□□□□ -0.51
RALGAPA1-215ENST00000556839 NUTM1Q86Y26 1132 aa11.86□□□□□ -0.51
RALGAPA1-215ENST00000556839 KRI1Q8N9T8 703 aaKnown RBP11.86□□□□□ -0.51
RALGAPA1-215ENST00000556839 SYMPKQ92797 1274 aaKnown RBP11.85□□□□□ -0.51
RALGAPA1-215ENST00000556839 FAM217BQ9NTX9 383 aaPredicted RBP11.85□□□□□ -0.51
RALGAPA1-215ENST00000556839 KIFC2Q96AC6 838 aa11.84□□□□□ -0.51
RALGAPA1-215ENST00000556839 NUDT12Q9BQG2 462 aa11.84□□□□□ -0.51
RALGAPA1-215ENST00000556839 STK17AQ9UEE5 414 aa11.84□□□□□ -0.51
RALGAPA1-215ENST00000556839 ALDH1A1P00352 501 aa11.83□□□□□ -0.52
RALGAPA1-215ENST00000556839 RETREG3Q86VR2 466 aa11.83□□□□□ -0.52
RALGAPA1-215ENST00000556839 WIPF1O43516 503 aa11.81□□□□□ -0.52
RALGAPA1-215ENST00000556839 EHBP1Q8NDI1 1231 aa11.81□□□□□ -0.52
RALGAPA1-215ENST00000556839 TERTO14746 1132 aaKnown RBP11.8□□□□□ -0.52
RALGAPA1-215ENST00000556839 INSM1Q01101 510 aaPredicted RBP11.8□□□□□ -0.52
RALGAPA1-215ENST00000556839 C6orf229H3BNL8 230 aa11.78□□□□□ -0.52
RALGAPA1-215ENST00000556839 FDX1P10109 184 aa11.78□□□□□ -0.52
RALGAPA1-215ENST00000556839 MS4A1P11836 297 aa11.76□□□□□ -0.53
RALGAPA1-215ENST00000556839 PTCRAQ6ISU1 281 aaPredicted RBP11.76□□□□□ -0.53
RALGAPA1-215ENST00000556839 WASF2Q9Y6W5 498 aa11.76□□□□□ -0.53
RALGAPA1-215ENST00000556839 CCNYL3P0C7X3 344 aa11.75□□□□□ -0.53
RALGAPA1-215ENST00000556839 VSIG10Q8N0Z9 540 aa11.74□□□□□ -0.53
RALGAPA1-215ENST00000556839 PCDHGC3Q9UN70 934 aa11.74□□□□□ -0.53
RALGAPA1-215ENST00000556839 SIAH2O43255 324 aa11.73□□□□□ -0.53
RALGAPA1-215ENST00000556839 SH3BP2P78314 561 aa11.72□□□□□ -0.53
RALGAPA1-215ENST00000556839 CAPN5O15484 640 aaPredicted RBP11.71□□□□□ -0.53
RALGAPA1-215ENST00000556839 BMP1P13497 986 aa11.71□□□□□ -0.53
RALGAPA1-215ENST00000556839 SSTR3P32745 418 aaPredicted RBP11.71□□□□□ -0.53
RALGAPA1-215ENST00000556839 PTPRNQ16849 979 aa11.71□□□□□ -0.53
RALGAPA1-215ENST00000556839 LCE2CQ5TA81 110 aa11.71□□□□□ -0.53
RALGAPA1-215ENST00000556839 TTLL12Q14166 644 aaPredicted RBP11.7□□□□□ -0.54
RALGAPA1-215ENST00000556839 SPIRE2Q8WWL2 714 aa11.7□□□□□ -0.54
RALGAPA1-215ENST00000556839 UNC93B1Q9H1C4 597 aa11.7□□□□□ -0.54
RALGAPA1-215ENST00000556839 SLC16A10Q8TF71 515 aa11.69□□□□□ -0.54
RALGAPA1-215ENST00000556839 LINC01559Q495D7 138 aa11.68□□□□□ -0.54
RALGAPA1-215ENST00000556839 NDUFV2P19404 249 aa11.67□□□□□ -0.54
RALGAPA1-215ENST00000556839 NXF1Q9UBU9 619 aaKnown RBP11.67□□□□□ -0.54
RALGAPA1-215ENST00000556839 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.66□□□□□ -0.54
RALGAPA1-215ENST00000556839 TRIM46Q7Z4K8 759 aa11.66□□□□□ -0.54
RALGAPA1-215ENST00000556839 PRR7Q8TB68 274 aa11.66□□□□□ -0.54
RALGAPA1-215ENST00000556839 EVA1BQ9NVM1 165 aa11.66□□□□□ -0.54
RALGAPA1-215ENST00000556839 TLL2Q9Y6L7 1015 aa11.66□□□□□ -0.54
RALGAPA1-215ENST00000556839 MOXD2PA6NHM9 499 aa11.65□□□□□ -0.54
RALGAPA1-215ENST00000556839 MTMR2Q13614 643 aa11.65□□□□□ -0.54
RALGAPA1-215ENST00000556839 KCNH2Q12809 1159 aa11.64□□□□□ -0.55
RALGAPA1-215ENST00000556839 BAP1Q92560 729 aa11.64□□□□□ -0.55
RALGAPA1-215ENST00000556839 PLEKHG3A1L390 1219 aa11.62□□□□□ -0.55
RALGAPA1-215ENST00000556839 SPDYE5A6NIY4 337 aa11.62□□□□□ -0.55
RALGAPA1-215ENST00000556839 ZNF511Q8NB15 262 aa11.62□□□□□ -0.55
RALGAPA1-215ENST00000556839 VARSP26640 1264 aaKnown RBP11.61□□□□□ -0.55
RALGAPA1-215ENST00000556839 DESI1Q6ICB0 168 aa11.61□□□□□ -0.55
RALGAPA1-215ENST00000556839 GIGYF2Q6Y7W6 1299 aaKnown RBP11.6□□□□□ -0.55
RALGAPA1-215ENST00000556839 NPAS3Q8IXF0 933 aa11.6□□□□□ -0.55
RALGAPA1-215ENST00000556839 IRF7Q92985 503 aa11.6□□□□□ -0.55
RALGAPA1-215ENST00000556839 NNTQ13423 1086 aa11.6□□□□□ -0.55
RALGAPA1-215ENST00000556839 AMHR2Q16671 573 aa11.6□□□□□ -0.55
RALGAPA1-215ENST00000556839 FAM181BA6NEQ2 426 aa11.59□□□□□ -0.55
RALGAPA1-215ENST00000556839 CTHP32929 405 aa11.59□□□□□ -0.55
RALGAPA1-215ENST00000556839 BARGINQ6ZT62 677 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms