RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 BRINP3Q76B58 766 aa20.41■□□□□ 0.86
SLIRP-207ENST00000556831 ADGRB1O14514 1584 aa20.41■□□□□ 0.86
SLIRP-207ENST00000556831 DDX17Q92841 729 aaKnown RBP20.4■□□□□ 0.86
SLIRP-207ENST00000556831 AHDC1Q5TGY3 1603 aaPredicted RBP20.38■□□□□ 0.85
SLIRP-207ENST00000556831 ABCC11Q96J66 1382 aa20.38■□□□□ 0.85
SLIRP-207ENST00000556831 SIN3AQ96ST3 1273 aa20.38■□□□□ 0.85
SLIRP-207ENST00000556831 C1orf167Q5SNV9 1468 aa20.37■□□□□ 0.85
SLIRP-207ENST00000556831 NHSL1Q5SYE7 1610 aa20.36■□□□□ 0.85
SLIRP-207ENST00000556831 CDC42BPGQ6DT37 1551 aa20.34■□□□□ 0.85
SLIRP-207ENST00000556831 ORAI2Q96SN7 254 aa20.34■□□□□ 0.85
SLIRP-207ENST00000556831 NUTM2FA1L443 756 aa20.32■□□□□ 0.84
SLIRP-207ENST00000556831 NEUROD1Q13562 356 aa20.32■□□□□ 0.84
SLIRP-207ENST00000556831 SAFB2Q14151 953 aaKnown RBP eCLIP20.32■□□□□ 0.84
SLIRP-207ENST00000556831 CDK12Q9NYV4 1490 aaPredicted RBP20.31■□□□□ 0.84
SLIRP-207ENST00000556831 FMN2Q9NZ56 1722 aa20.3■□□□□ 0.84
SLIRP-207ENST00000556831 ZNF772Q68DY9 489 aaPredicted RBP20.3■□□□□ 0.84
SLIRP-207ENST00000556831 LRP6O75581 1613 aa20.3■□□□□ 0.84
SLIRP-207ENST00000556831 PRAM1Q96QH2 718 aa20.29■□□□□ 0.84
SLIRP-207ENST00000556831 POGKQ9P215 609 aa20.29■□□□□ 0.84
SLIRP-207ENST00000556831 TRAK1Q9UPV9 953 aa20.29■□□□□ 0.84
SLIRP-207ENST00000556831 DLC1Q96QB1 1528 aa20.28■□□□□ 0.84
SLIRP-207ENST00000556831 RGPD8O14715 1765 aaPredicted RBP20.28■□□□□ 0.84
SLIRP-207ENST00000556831 SHPRHQ149N8 1683 aa20.27■□□□□ 0.84
SLIRP-207ENST00000556831 JCADQ9P266 1359 aa20.27■□□□□ 0.84
SLIRP-207ENST00000556831 ARHGEF28Q8N1W1 1705 aaKnown RBP20.27■□□□□ 0.83
SLIRP-207ENST00000556831 NBPF1Q3BBV0 1214 aa20.26■□□□□ 0.83
SLIRP-207ENST00000556831 L3MBTL2Q969R5 705 aa20.26■□□□□ 0.83
SLIRP-207ENST00000556831 SIRT1Q96EB6 747 aa20.26■□□□□ 0.83
SLIRP-207ENST00000556831 KIAA1210Q9ULL0 1709 aa20.26■□□□□ 0.83
SLIRP-207ENST00000556831 ZRANB1Q9UGI0 708 aa20.25■□□□□ 0.83
SLIRP-207ENST00000556831 USP32Q8NFA0 1604 aa20.24■□□□□ 0.83
SLIRP-207ENST00000556831 PCGF6Q9BYE7 350 aa20.24■□□□□ 0.83
SLIRP-207ENST00000556831 TONSLQ96HA7 1378 aa20.23■□□□□ 0.83
SLIRP-207ENST00000556831 HIRIP3Q9BW71 556 aaPredicted RBP20.23■□□□□ 0.83
SLIRP-207ENST00000556831 ESCO1Q5FWF5 840 aa20.22■□□□□ 0.83
SLIRP-207ENST00000556831 XPCQ01831 940 aaPredicted RBP20.21■□□□□ 0.83
SLIRP-207ENST00000556831 IFFO2Q5TF58 517 aa20.21■□□□□ 0.83
SLIRP-207ENST00000556831 MINK1Q8N4C8 1332 aaPredicted RBP20.21■□□□□ 0.83
SLIRP-207ENST00000556831 ADGRB2O60241 1585 aa20.21■□□□□ 0.83
SLIRP-207ENST00000556831 PXDNQ92626 1479 aa20.19■□□□□ 0.82
SLIRP-207ENST00000556831 RXRBP28702 533 aa20.19■□□□□ 0.82
SLIRP-207ENST00000556831 PNPLA6Q8IY17 1366 aa20.19■□□□□ 0.82
SLIRP-207ENST00000556831 SOS2Q07890 1332 aaPredicted RBP20.18■□□□□ 0.82
SLIRP-207ENST00000556831 TRPM1Q7Z4N2 1603 aa20.17■□□□□ 0.82
SLIRP-207ENST00000556831 NUTM2BA6NNL0 878 aaPredicted RBP20.17■□□□□ 0.82
SLIRP-207ENST00000556831 NUTM2EB1AL46 878 aaPredicted RBP20.17■□□□□ 0.82
SLIRP-207ENST00000556831 FOXO3O43524 673 aa20.17■□□□□ 0.82
SLIRP-207ENST00000556831 NUTM2AQ8IVF1 878 aaPredicted RBP20.17■□□□□ 0.82
SLIRP-207ENST00000556831 EIF3AQ14152 1382 aaKnown RBP20.17■□□□□ 0.82
SLIRP-207ENST00000556831 PRR36Q9H6K5 1346 aa20.16■□□□□ 0.82
SLIRP-207ENST00000556831 NBPF8Q3BBV2 869 aa20.15■□□□□ 0.82
SLIRP-207ENST00000556831 KIF1AQ12756 1690 aa20.13■□□□□ 0.81
SLIRP-207ENST00000556831 ROCK2O75116 1388 aaKnown RBP20.13■□□□□ 0.81
SLIRP-207ENST00000556831 SPATA31A6Q5VVP1 1343 aa20.13■□□□□ 0.81
SLIRP-207ENST00000556831 NPHP3Q7Z494 1330 aa20.13■□□□□ 0.81
SLIRP-207ENST00000556831 LRRC59Q96AG4 307 aaKnown RBP20.13■□□□□ 0.81
SLIRP-207ENST00000556831 PMFBP1Q8TBY8 1022 aa20.1■□□□□ 0.81
SLIRP-207ENST00000556831 TULP4Q9NRJ4 1543 aa20.1■□□□□ 0.81
SLIRP-207ENST00000556831 ANKARQ7Z5J8 1434 aa20.1■□□□□ 0.81
SLIRP-207ENST00000556831 COL22A1Q8NFW1 1626 aaPredicted RBP20.09■□□□□ 0.81
SLIRP-207ENST00000556831 WASLO00401 505 aaPredicted RBP20.09■□□□□ 0.81
SLIRP-207ENST00000556831 MEX3CQ5U5Q3 659 aaKnown RBP20.09■□□□□ 0.81
SLIRP-207ENST00000556831 PHF8Q9UPP1 1060 aa20.09■□□□□ 0.81
SLIRP-207ENST00000556831 QRICH2Q9H0J4 1663 aa20.08■□□□□ 0.81
SLIRP-207ENST00000556831 ATP7BP35670 1465 aa20.08■□□□□ 0.81
SLIRP-207ENST00000556831 CLSPNQ9HAW4 1339 aa20.07■□□□□ 0.8
SLIRP-207ENST00000556831 CENPJQ9HC77 1338 aaPredicted RBP20.07■□□□□ 0.8
SLIRP-207ENST00000556831 ADAMTS2O95450 1211 aa20.05■□□□□ 0.8
SLIRP-207ENST00000556831 KRT28Q7Z3Y7 464 aa20.05■□□□□ 0.8
SLIRP-207ENST00000556831 TRPM3Q9HCF6 1732 aaPredicted RBP20.05■□□□□ 0.8
SLIRP-207ENST00000556831 TOPAZ1Q8N9V7 1692 aa20.04■□□□□ 0.8
SLIRP-207ENST00000556831 CCER1Q8TC90 406 aaPredicted RBP20.04■□□□□ 0.8
SLIRP-207ENST00000556831 ITSN1Q15811 1721 aa20.04■□□□□ 0.8
SLIRP-207ENST00000556831 PLEKHG5O94827 1062 aa20.03■□□□□ 0.8
SLIRP-207ENST00000556831 CDK19Q9BWU1 502 aa20.03■□□□□ 0.8
SLIRP-207ENST00000556831 SPATA31A3Q5VYP0 1347 aa20.02■□□□□ 0.8
SLIRP-207ENST00000556831 LRP5O75197 1615 aa20.02■□□□□ 0.8
SLIRP-207ENST00000556831 PSME1Q06323 249 aa20.02■□□□□ 0.8
SLIRP-207ENST00000556831 RALGAPBQ86X10 1494 aa20.02■□□□□ 0.8
SLIRP-207ENST00000556831 AFF2P51816 1311 aa20.02■□□□□ 0.79
SLIRP-207ENST00000556831 NUDT16Q96DE0 195 aaKnown RBP20.01■□□□□ 0.79
SLIRP-207ENST00000556831 C8orf37Q96NL8 207 aa20.01■□□□□ 0.79
SLIRP-207ENST00000556831 CARD11Q9BXL7 1154 aa20.01■□□□□ 0.79
SLIRP-207ENST00000556831 ATAD2Q6PL18 1390 aa20■□□□□ 0.79
SLIRP-207ENST00000556831 ABCA3Q99758 1704 aa20■□□□□ 0.79
SLIRP-207ENST00000556831 TNS3Q68CZ2 1445 aa20■□□□□ 0.79
SLIRP-207ENST00000556831 SRPK2P78362 688 aaKnown RBP19.99■□□□□ 0.79
SLIRP-207ENST00000556831 CABLES1Q8TDN4 633 aa19.99■□□□□ 0.79
SLIRP-207ENST00000556831 MARF1Q9Y4F3 1742 aaKnown RBP19.99■□□□□ 0.79
SLIRP-207ENST00000556831 GPRASP1Q5JY77 1395 aa19.98■□□□□ 0.79
SLIRP-207ENST00000556831 ALS2Q96Q42 1657 aa19.98■□□□□ 0.79
SLIRP-207ENST00000556831 CABP2Q9NPB3 220 aa19.98■□□□□ 0.79
SLIRP-207ENST00000556831 RGS12O14924 1447 aa19.98■□□□□ 0.79
SLIRP-207ENST00000556831 NGDNQ8NEJ9 315 aaKnown RBP19.97■□□□□ 0.79
SLIRP-207ENST00000556831 TIMELESSQ9UNS1 1208 aa19.96■□□□□ 0.79
SLIRP-207ENST00000556831 LMOD2Q6P5Q4 547 aa19.95■□□□□ 0.78
SLIRP-207ENST00000556831 EVC2Q86UK5 1308 aa19.95■□□□□ 0.78
SLIRP-207ENST00000556831 SBNO1A3KN83 1393 aa19.95■□□□□ 0.78
SLIRP-207ENST00000556831 HAP1P54257 671 aaPredicted RBP19.94■□□□□ 0.78
SLIRP-207ENST00000556831 CRYBG1Q9Y4K1 1723 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms