RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-223ENST00000555904 LRRC7Q96NW7 1537 aa17.52■□□□□ 0.4
ABCD4-223ENST00000555904 MINK1Q8N4C8 1332 aaPredicted RBP17.52■□□□□ 0.4
ABCD4-223ENST00000555904 RBM33Q96EV2 1170 aaKnown RBP17.51■□□□□ 0.39
ABCD4-223ENST00000555904 ADGRL3Q9HAR2 1447 aa17.51■□□□□ 0.39
ABCD4-223ENST00000555904 MSH6P52701 1360 aa17.51■□□□□ 0.39
ABCD4-223ENST00000555904 LTBP4Q8N2S1 1624 aa17.5■□□□□ 0.39
ABCD4-223ENST00000555904 EVC2Q86UK5 1308 aa17.49■□□□□ 0.39
ABCD4-223ENST00000555904 TMF1P82094 1093 aa17.49■□□□□ 0.39
ABCD4-223ENST00000555904 HIRIP3Q9BW71 556 aaPredicted RBP17.49■□□□□ 0.39
ABCD4-223ENST00000555904 ADGRB2O60241 1585 aa17.49■□□□□ 0.39
ABCD4-223ENST00000555904 C19orf44Q9H6X5 657 aa17.48■□□□□ 0.39
ABCD4-223ENST00000555904 NALCNQ8IZF0 1738 aa17.47■□□□□ 0.39
ABCD4-223ENST00000555904 ATF3P18847 181 aa17.47■□□□□ 0.39
ABCD4-223ENST00000555904 CDCA8Q53HL2 280 aa17.47■□□□□ 0.39
ABCD4-223ENST00000555904 TESK2Q96S53 571 aa17.47■□□□□ 0.39
ABCD4-223ENST00000555904 DCCP43146 1447 aa17.47■□□□□ 0.39
ABCD4-223ENST00000555904 CDC42BPGQ6DT37 1551 aa17.46■□□□□ 0.39
ABCD4-223ENST00000555904 SRPK2P78362 688 aaKnown RBP17.46■□□□□ 0.39
ABCD4-223ENST00000555904 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.46■□□□□ 0.39
ABCD4-223ENST00000555904 WASLO00401 505 aaPredicted RBP17.45■□□□□ 0.38
ABCD4-223ENST00000555904 CADPS2Q86UW7 1296 aa17.44■□□□□ 0.38
ABCD4-223ENST00000555904 TULP4Q9NRJ4 1543 aa17.43■□□□□ 0.38
ABCD4-223ENST00000555904 CDK19Q9BWU1 502 aa17.42■□□□□ 0.38
ABCD4-223ENST00000555904 DISP3Q9P2K9 1392 aa17.41■□□□□ 0.38
ABCD4-223ENST00000555904 IQSEC2Q5JU85 1478 aa17.41■□□□□ 0.38
ABCD4-223ENST00000555904 XIRP1Q702N8 1843 aaKnown RBP17.4■□□□□ 0.38
ABCD4-223ENST00000555904 POLR3GLQ9BT43 218 aa17.4■□□□□ 0.38
ABCD4-223ENST00000555904 ATAD2Q6PL18 1390 aa17.4■□□□□ 0.38
ABCD4-223ENST00000555904 ANKARQ7Z5J8 1434 aa17.39■□□□□ 0.38
ABCD4-223ENST00000555904 CERKQ8TCT0 537 aa17.39■□□□□ 0.37
ABCD4-223ENST00000555904 CABP2Q9NPB3 220 aa17.39■□□□□ 0.37
ABCD4-223ENST00000555904 FMN2Q9NZ56 1722 aa17.38■□□□□ 0.37
ABCD4-223ENST00000555904 NUTM2FA1L443 756 aa17.38■□□□□ 0.37
ABCD4-223ENST00000555904 PUS7Q96PZ0 661 aaKnown RBP17.38■□□□□ 0.37
ABCD4-223ENST00000555904 ZNF316A6NFI3 1004 aaPredicted RBP17.36■□□□□ 0.37
ABCD4-223ENST00000555904 ATP7BP35670 1465 aa17.36■□□□□ 0.37
ABCD4-223ENST00000555904 TOM1O60784 492 aa17.35■□□□□ 0.37
ABCD4-223ENST00000555904 NUDT16Q96DE0 195 aaKnown RBP17.35■□□□□ 0.37
ABCD4-223ENST00000555904 CCDC61Q9Y6R9 512 aa17.35■□□□□ 0.37
ABCD4-223ENST00000555904 KIF7Q2M1P5 1343 aa17.35■□□□□ 0.37
ABCD4-223ENST00000555904 NINLQ9Y2I6 1382 aa17.35■□□□□ 0.37
ABCD4-223ENST00000555904 MST1RQ04912 1400 aa17.34■□□□□ 0.37
ABCD4-223ENST00000555904 TMC1Q8TDI8 760 aa17.34■□□□□ 0.37
ABCD4-223ENST00000555904 CCDC7Q96M83 1385 aa17.34■□□□□ 0.37
ABCD4-223ENST00000555904 SLAIN2Q9P270 581 aa17.34■□□□□ 0.37
ABCD4-223ENST00000555904 C1orf167Q5SNV9 1468 aa17.33■□□□□ 0.37
ABCD4-223ENST00000555904 ITSN1Q15811 1721 aa17.33■□□□□ 0.36
ABCD4-223ENST00000555904 PPIP5K1Q6PFW1 1433 aa17.32■□□□□ 0.36
ABCD4-223ENST00000555904 WASHC2AQ641Q2 1341 aa17.32■□□□□ 0.36
ABCD4-223ENST00000555904 C11orf95C9JLR9 678 aaPredicted RBP17.32■□□□□ 0.36
ABCD4-223ENST00000555904 ESCO1Q5FWF5 840 aa17.32■□□□□ 0.36
ABCD4-223ENST00000555904 PRR36Q9H6K5 1346 aa17.31■□□□□ 0.36
ABCD4-223ENST00000555904 UBAP1LF5GYI3 381 aa17.31■□□□□ 0.36
ABCD4-223ENST00000555904 USP32Q8NFA0 1604 aa17.31■□□□□ 0.36
ABCD4-223ENST00000555904 TOPAZ1Q8N9V7 1692 aa17.29■□□□□ 0.36
ABCD4-223ENST00000555904 TERF2IPQ9NYB0 399 aa17.29■□□□□ 0.36
ABCD4-223ENST00000555904 CABP1Q9NZU7 370 aa17.29■□□□□ 0.36
ABCD4-223ENST00000555904 PHF8Q9UPP1 1060 aa17.29■□□□□ 0.36
ABCD4-223ENST00000555904 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
ABCD4-223ENST00000555904 HDGFL2Q7Z4V5 671 aaPredicted RBP17.28■□□□□ 0.36
ABCD4-223ENST00000555904 NGDNQ8NEJ9 315 aaKnown RBP17.28■□□□□ 0.36
ABCD4-223ENST00000555904 KIF1AQ12756 1690 aa17.28■□□□□ 0.36
ABCD4-223ENST00000555904 ORAI2Q96SN7 254 aa17.27■□□□□ 0.36
ABCD4-223ENST00000555904 PIP4K2BP78356 416 aa17.26■□□□□ 0.35
ABCD4-223ENST00000555904 PMFBP1Q8TBY8 1022 aa17.26■□□□□ 0.35
ABCD4-223ENST00000555904 SLC12A5Q9H2X9 1139 aa17.26■□□□□ 0.35
ABCD4-223ENST00000555904 PLEKHG3A1L390 1219 aa17.25■□□□□ 0.35
ABCD4-223ENST00000555904 BRINP3Q76B58 766 aa17.25■□□□□ 0.35
ABCD4-223ENST00000555904 MYOM1P52179 1685 aa17.25■□□□□ 0.35
ABCD4-223ENST00000555904 ANKRD36BQ8N2N9 1353 aa17.25■□□□□ 0.35
ABCD4-223ENST00000555904 ACEP12821 1306 aa17.23■□□□□ 0.35
ABCD4-223ENST00000555904 NPHP3Q7Z494 1330 aa17.23■□□□□ 0.35
ABCD4-223ENST00000555904 RGPD8O14715 1765 aaPredicted RBP17.23■□□□□ 0.35
ABCD4-223ENST00000555904 ZNF692Q9BU19 519 aaPredicted RBP17.23■□□□□ 0.35
ABCD4-223ENST00000555904 POLR3AO14802 1390 aaPredicted RBP17.23■□□□□ 0.35
ABCD4-223ENST00000555904 FOXO3O43524 673 aa17.22■□□□□ 0.35
ABCD4-223ENST00000555904 PSME1Q06323 249 aa17.22■□□□□ 0.35
ABCD4-223ENST00000555904 A0A1W2PP64 1363 aa17.22■□□□□ 0.35
ABCD4-223ENST00000555904 KTN1Q86UP2 1357 aaKnown RBP17.22■□□□□ 0.35
ABCD4-223ENST00000555904 ROBO1Q9Y6N7 1651 aa17.22■□□□□ 0.35
ABCD4-223ENST00000555904 CPSF1Q10570 1443 aaKnown RBP17.21■□□□□ 0.34
ABCD4-223ENST00000555904 PANK3Q9H999 370 aa17.2■□□□□ 0.34
ABCD4-223ENST00000555904 DDX10Q13206 875 aaKnown RBP17.19■□□□□ 0.34
ABCD4-223ENST00000555904 USP6P35125 1406 aa17.19■□□□□ 0.34
ABCD4-223ENST00000555904 CD163L1Q9NR16 1453 aa17.18■□□□□ 0.34
ABCD4-223ENST00000555904 BRD4O60885 1362 aaPredicted RBP17.18■□□□□ 0.34
ABCD4-223ENST00000555904 EDC4Q6P2E9 1401 aaKnown RBP17.18■□□□□ 0.34
ABCD4-223ENST00000555904 KRT28Q7Z3Y7 464 aa17.17■□□□□ 0.34
ABCD4-223ENST00000555904 KNSTRNQ9Y448 316 aa17.17■□□□□ 0.34
ABCD4-223ENST00000555904 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
ABCD4-223ENST00000555904 AKAP12Q02952 1782 aa17.16■□□□□ 0.34
ABCD4-223ENST00000555904 PAK3O75914 559 aaPredicted RBP17.16■□□□□ 0.34
ABCD4-223ENST00000555904 XPCQ01831 940 aaPredicted RBP17.16■□□□□ 0.34
ABCD4-223ENST00000555904 NHSL1Q5SYE7 1610 aa17.15■□□□□ 0.34
ABCD4-223ENST00000555904 AHDC1Q5TGY3 1603 aaPredicted RBP17.15■□□□□ 0.34
ABCD4-223ENST00000555904 DDX17Q92841 729 aaKnown RBP17.15■□□□□ 0.34
ABCD4-223ENST00000555904 MON2Q7Z3U7 1717 aa17.15■□□□□ 0.34
ABCD4-223ENST00000555904 CGNL1Q0VF96 1302 aa17.15■□□□□ 0.34
ABCD4-223ENST00000555904 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.14■□□□□ 0.33
ABCD4-223ENST00000555904 TTC21AQ8NDW8 1320 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms