RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 CCDC61Q9Y6R9 512 aa9.21□□□□□ -0.94
TDP1-213ENST00000555880 PIK3C2GO75747 1445 aa9.21□□□□□ -0.94
TDP1-213ENST00000555880 CD109Q6YHK3 1445 aa9.21□□□□□ -0.94
TDP1-213ENST00000555880 ADGRL1O94910 1474 aa9.2□□□□□ -0.94
TDP1-213ENST00000555880 ADAMTS8Q9UP79 889 aa9.2□□□□□ -0.94
TDP1-213ENST00000555880 NPC1L1Q9UHC9 1359 aa9.2□□□□□ -0.94
TDP1-213ENST00000555880 MYOM2P54296 1465 aa9.2□□□□□ -0.94
TDP1-213ENST00000555880 MAP3K4Q9Y6R4 1608 aa9.2□□□□□ -0.94
TDP1-213ENST00000555880 KIF3BO15066 747 aa9.19□□□□□ -0.94
TDP1-213ENST00000555880 AMER1Q5JTC6 1135 aaPredicted RBP9.19□□□□□ -0.94
TDP1-213ENST00000555880 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.19□□□□□ -0.94
TDP1-213ENST00000555880 ABCA6Q8N139 1617 aa9.18□□□□□ -0.94
TDP1-213ENST00000555880 EFCAB6Q5THR3 1501 aa9.18□□□□□ -0.94
TDP1-213ENST00000555880 IFT172Q9UG01 1749 aa9.18□□□□□ -0.94
TDP1-213ENST00000555880 PLIN1O60240 522 aa9.17□□□□□ -0.94
TDP1-213ENST00000555880 GOLGA2Q08379 1002 aa9.17□□□□□ -0.94
TDP1-213ENST00000555880 CRBNQ96SW2 442 aa9.17□□□□□ -0.94
TDP1-213ENST00000555880 MROH1Q8NDA8 1641 aa9.17□□□□□ -0.94
TDP1-213ENST00000555880 PDE4AP27815 886 aa9.17□□□□□ -0.94
TDP1-213ENST00000555880 RTL5Q5HYW3 569 aaPredicted RBP9.16□□□□□ -0.94
TDP1-213ENST00000555880 DNAJC5Q9H3Z4 198 aa9.16□□□□□ -0.94
TDP1-213ENST00000555880 MYO3AQ8NEV4 1616 aa9.16□□□□□ -0.94
TDP1-213ENST00000555880 CFAP74Q9C0B2 1584 aa9.15□□□□□ -0.94
TDP1-213ENST00000555880 NPM2Q86SE8 214 aaKnown RBP9.15□□□□□ -0.94
TDP1-213ENST00000555880 BCL11AQ9H165 835 aa9.15□□□□□ -0.94
TDP1-213ENST00000555880 ZNF518AQ6AHZ1 1483 aa9.15□□□□□ -0.94
TDP1-213ENST00000555880 PPRC1Q5VV67 1664 aaKnown RBP9.15□□□□□ -0.94
TDP1-213ENST00000555880 PLEKHH1Q9ULM0 1364 aa9.15□□□□□ -0.94
TDP1-213ENST00000555880 UGGT1Q9NYU2 1555 aa9.15□□□□□ -0.94
TDP1-213ENST00000555880 KIDINS220Q9ULH0 1771 aa9.15□□□□□ -0.94
TDP1-213ENST00000555880 ERVK-7P63135 1459 aa9.15□□□□□ -0.95
TDP1-213ENST00000555880 NBR1Q14596 966 aa9.15□□□□□ -0.95
TDP1-213ENST00000555880 NGEFQ8N5V2 710 aa9.15□□□□□ -0.95
TDP1-213ENST00000555880 BACH2Q9BYV9 841 aa9.15□□□□□ -0.95
TDP1-213ENST00000555880 LMTK2Q8IWU2 1503 aa9.14□□□□□ -0.95
TDP1-213ENST00000555880 ZNF521Q96K83 1311 aa9.14□□□□□ -0.95
TDP1-213ENST00000555880 MROH2AA6NES4 1674 aa9.14□□□□□ -0.95
TDP1-213ENST00000555880 CFAP70Q5T0N1 1121 aa9.14□□□□□ -0.95
TDP1-213ENST00000555880 DUSP27Q5VZP5 1158 aa9.14□□□□□ -0.95
TDP1-213ENST00000555880 KIF12Q96FN5 646 aa9.14□□□□□ -0.95
TDP1-213ENST00000555880 SETBP1Q9Y6X0 1596 aa9.14□□□□□ -0.95
TDP1-213ENST00000555880 CENPQQ7L2Z9 268 aaPredicted RBP9.13□□□□□ -0.95
TDP1-213ENST00000555880 SBNO2Q9Y2G9 1366 aa9.13□□□□□ -0.95
TDP1-213ENST00000555880 NRXN1Q9ULB1 1477 aa9.13□□□□□ -0.95
TDP1-213ENST00000555880 NUBP1P53384 320 aa9.13□□□□□ -0.95
TDP1-213ENST00000555880 ADGRB3O60242 1522 aa9.12□□□□□ -0.95
TDP1-213ENST00000555880 NKTRP30414 1462 aaKnown RBP9.12□□□□□ -0.95
TDP1-213ENST00000555880 ADGRF5Q8IZF2 1346 aa9.12□□□□□ -0.95
TDP1-213ENST00000555880 DEKP35659 375 aaKnown RBP9.12□□□□□ -0.95
TDP1-213ENST00000555880 SLFN5Q08AF3 891 aa9.12□□□□□ -0.95
TDP1-213ENST00000555880 DDRGK1Q96HY6 314 aa9.12□□□□□ -0.95
TDP1-213ENST00000555880 NEO1Q92859 1461 aa9.12□□□□□ -0.95
TDP1-213ENST00000555880 CENPJQ9HC77 1338 aaPredicted RBP9.11□□□□□ -0.95
TDP1-213ENST00000555880 E9PSI1 815 aa9.11□□□□□ -0.95
TDP1-213ENST00000555880 FAM69CQ0P6D2 419 aa9.11□□□□□ -0.95
TDP1-213ENST00000555880 C20orf194Q5TEA3 1177 aa9.11□□□□□ -0.95
TDP1-213ENST00000555880 CCDC146Q8IYE0 955 aa9.11□□□□□ -0.95
TDP1-213ENST00000555880 QRICH2Q9H0J4 1663 aa9.11□□□□□ -0.95
TDP1-213ENST00000555880 PPLO60437 1756 aa9.11□□□□□ -0.95
TDP1-213ENST00000555880 POGZQ7Z3K3 1410 aa9.11□□□□□ -0.95
TDP1-213ENST00000555880 MAP3K13O43283 966 aa9.11□□□□□ -0.95
TDP1-213ENST00000555880 CHGAP10645 457 aaKnown RBP9.11□□□□□ -0.95
TDP1-213ENST00000555880 ZC3H13Q5T200 1668 aaKnown RBP9.1□□□□□ -0.95
TDP1-213ENST00000555880 NOS1P29475 1434 aa9.1□□□□□ -0.95
TDP1-213ENST00000555880 APAF1O14727 1248 aa9.1□□□□□ -0.95
TDP1-213ENST00000555880 FBXO3Q9UK99 471 aa9.1□□□□□ -0.95
TDP1-213ENST00000555880 KDM2BQ8NHM5 1336 aa9.1□□□□□ -0.95
TDP1-213ENST00000555880 HECW2Q9P2P5 1572 aa9.09□□□□□ -0.95
TDP1-213ENST00000555880 ASTLQ6HA08 431 aaPredicted RBP9.09□□□□□ -0.95
TDP1-213ENST00000555880 TRMT2AQ8IZ69 625 aaKnown RBP9.09□□□□□ -0.95
TDP1-213ENST00000555880 TRPC6Q9Y210 931 aa9.09□□□□□ -0.95
TDP1-213ENST00000555880 RIMBP3CA6NJZ7 1639 aa9.09□□□□□ -0.95
TDP1-213ENST00000555880 RIMBP3BA6NNM3 1639 aa9.09□□□□□ -0.95
TDP1-213ENST00000555880 RIMBP3Q9UFD9 1639 aa9.09□□□□□ -0.95
TDP1-213ENST00000555880 CFAP65Q6ZU64 1925 aaKnown RBP9.09□□□□□ -0.95
TDP1-213ENST00000555880 POLR3AO14802 1390 aaPredicted RBP9.09□□□□□ -0.95
TDP1-213ENST00000555880 NINLQ9Y2I6 1382 aa9.09□□□□□ -0.95
TDP1-213ENST00000555880 ATMINO43313 823 aaPredicted RBP9.08□□□□□ -0.96
TDP1-213ENST00000555880 RAPGEF3O95398 923 aa9.08□□□□□ -0.96
TDP1-213ENST00000555880 CARD14Q9BXL6 1004 aa9.08□□□□□ -0.96
TDP1-213ENST00000555880 RPGRIP1LQ68CZ1 1315 aa9.08□□□□□ -0.96
TDP1-213ENST00000555880 MLH3Q9UHC1 1453 aa9.08□□□□□ -0.96
TDP1-213ENST00000555880 MORC1Q86VD1 984 aa9.08□□□□□ -0.96
TDP1-213ENST00000555880 DAXXQ9UER7 740 aaPredicted RBP9.08□□□□□ -0.96
TDP1-213ENST00000555880 NSD3Q9BZ95 1437 aa9.08□□□□□ -0.96
TDP1-213ENST00000555880 USP32Q8NFA0 1604 aa9.08□□□□□ -0.96
TDP1-213ENST00000555880 NPATQ14207 1427 aa9.07□□□□□ -0.96
TDP1-213ENST00000555880 PPM1GO15355 546 aaPredicted RBP9.07□□□□□ -0.96
TDP1-213ENST00000555880 CANXP27824 592 aaKnown RBP9.07□□□□□ -0.96
TDP1-213ENST00000555880 GGT6Q6P531 493 aa9.07□□□□□ -0.96
TDP1-213ENST00000555880 POTEB2H3BUK9 544 aa9.06□□□□□ -0.96
TDP1-213ENST00000555880 USP35Q9P2H5 1018 aa9.06□□□□□ -0.96
TDP1-213ENST00000555880 CAMSAP1Q5T5Y3 1602 aa9.06□□□□□ -0.96
TDP1-213ENST00000555880 FAM161AQ3B820 660 aa9.06□□□□□ -0.96
TDP1-213ENST00000555880 CFAP53Q96M91 514 aa9.06□□□□□ -0.96
TDP1-213ENST00000555880 C14orf93Q9H972 538 aaKnown RBP9.06□□□□□ -0.96
TDP1-213ENST00000555880 TRAK1Q9UPV9 953 aa9.06□□□□□ -0.96
TDP1-213ENST00000555880 ABCC3O15438 1527 aa9.06□□□□□ -0.96
TDP1-213ENST00000555880 CGNL1Q0VF96 1302 aa9.06□□□□□ -0.96
TDP1-213ENST00000555880 ADGRB1O14514 1584 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms