RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 CFAP70Q5T0N1 1121 aa14.02□□□□□ -0.17
ACTN1-215ENST00000555616 PLEKHH1Q9ULM0 1364 aa14.01□□□□□ -0.17
ACTN1-215ENST00000555616 STK26Q9P289 416 aa14.01□□□□□ -0.17
ACTN1-215ENST00000555616 SIRT1Q96EB6 747 aa14□□□□□ -0.17
ACTN1-215ENST00000555616 WAPLQ7Z5K2 1190 aa13.99□□□□□ -0.17
ACTN1-215ENST00000555616 DCAF11Q8TEB1 546 aa13.99□□□□□ -0.17
ACTN1-215ENST00000555616 PHF23Q9BUL5 403 aaPredicted RBP13.99□□□□□ -0.17
ACTN1-215ENST00000555616 LRP6O75581 1613 aa13.98□□□□□ -0.17
ACTN1-215ENST00000555616 SPATA31A6Q5VVP1 1343 aa13.98□□□□□ -0.17
ACTN1-215ENST00000555616 ADGRB2O60241 1585 aa13.98□□□□□ -0.17
ACTN1-215ENST00000555616 FMN2Q9NZ56 1722 aa13.98□□□□□ -0.17
ACTN1-215ENST00000555616 CCER1Q8TC90 406 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-215ENST00000555616 KDM2AQ9Y2K7 1162 aa13.96□□□□□ -0.17
ACTN1-215ENST00000555616 ORAI2Q96SN7 254 aa13.95□□□□□ -0.18
ACTN1-215ENST00000555616 KIAA1210Q9ULL0 1709 aa13.95□□□□□ -0.18
ACTN1-215ENST00000555616 PRAM1Q96QH2 718 aa13.94□□□□□ -0.18
ACTN1-215ENST00000555616 PNPLA6Q8IY17 1366 aa13.94□□□□□ -0.18
ACTN1-215ENST00000555616 PXDNQ92626 1479 aa13.93□□□□□ -0.18
ACTN1-215ENST00000555616 SOS2Q07890 1332 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-215ENST00000555616 DDX17Q92841 729 aaKnown RBP13.93□□□□□ -0.18
ACTN1-215ENST00000555616 RGS17Q9UGC6 210 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-215ENST00000555616 KIF1AQ12756 1690 aa13.93□□□□□ -0.18
ACTN1-215ENST00000555616 LRRC59Q96AG4 307 aaKnown RBP13.92□□□□□ -0.18
ACTN1-215ENST00000555616 ARHGEF28Q8N1W1 1705 aaKnown RBP13.92□□□□□ -0.18
ACTN1-215ENST00000555616 NPHP3Q7Z494 1330 aa13.91□□□□□ -0.18
ACTN1-215ENST00000555616 ANKARQ7Z5J8 1434 aa13.91□□□□□ -0.18
ACTN1-215ENST00000555616 CLSPNQ9HAW4 1339 aa13.9□□□□□ -0.18
ACTN1-215ENST00000555616 COL22A1Q8NFW1 1626 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-215ENST00000555616 ESCO1Q5FWF5 840 aa13.9□□□□□ -0.18
ACTN1-215ENST00000555616 USP32Q8NFA0 1604 aa13.9□□□□□ -0.19
ACTN1-215ENST00000555616 POGKQ9P215 609 aa13.89□□□□□ -0.19
ACTN1-215ENST00000555616 TRAK1Q9UPV9 953 aa13.89□□□□□ -0.19
ACTN1-215ENST00000555616 EIF3AQ14152 1382 aaKnown RBP13.88□□□□□ -0.19
ACTN1-215ENST00000555616 SAFB2Q14151 953 aaKnown RBP eCLIP13.88□□□□□ -0.19
ACTN1-215ENST00000555616 TULP4Q9NRJ4 1543 aa13.88□□□□□ -0.19
ACTN1-215ENST00000555616 NUTM2FA1L443 756 aa13.87□□□□□ -0.19
ACTN1-215ENST00000555616 FOXO3O43524 673 aa13.86□□□□□ -0.19
ACTN1-215ENST00000555616 L3MBTL2Q969R5 705 aa13.86□□□□□ -0.19
ACTN1-215ENST00000555616 MEX3CQ5U5Q3 659 aaKnown RBP13.85□□□□□ -0.19
ACTN1-215ENST00000555616 POTEAQ6S8J7 498 aa13.85□□□□□ -0.19
ACTN1-215ENST00000555616 SIN3AQ96ST3 1273 aa13.85□□□□□ -0.19
ACTN1-215ENST00000555616 TRPM1Q7Z4N2 1603 aa13.85□□□□□ -0.19
ACTN1-215ENST00000555616 NUTM2BA6NNL0 878 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-215ENST00000555616 NUTM2EB1AL46 878 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-215ENST00000555616 NUTM2AQ8IVF1 878 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-215ENST00000555616 ATP7BP35670 1465 aa13.84□□□□□ -0.19
ACTN1-215ENST00000555616 MINK1Q8N4C8 1332 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-215ENST00000555616 NBPF1Q3BBV0 1214 aa13.83□□□□□ -0.2
ACTN1-215ENST00000555616 HIRIP3Q9BW71 556 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-215ENST00000555616 PHF8Q9UPP1 1060 aa13.83□□□□□ -0.2
ACTN1-215ENST00000555616 PRR36Q9H6K5 1346 aa13.83□□□□□ -0.2
ACTN1-215ENST00000555616 RGPD8O14715 1765 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-215ENST00000555616 WASLO00401 505 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-215ENST00000555616 XPCQ01831 940 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-215ENST00000555616 TNS3Q68CZ2 1445 aa13.81□□□□□ -0.2
ACTN1-215ENST00000555616 ZNF772Q68DY9 489 aaPredicted RBP13.81□□□□□ -0.2
ACTN1-215ENST00000555616 SPATA31A3Q5VYP0 1347 aa13.81□□□□□ -0.2
ACTN1-215ENST00000555616 SBNO1A3KN83 1393 aa13.81□□□□□ -0.2
ACTN1-215ENST00000555616 TOPAZ1Q8N9V7 1692 aa13.8□□□□□ -0.2
ACTN1-215ENST00000555616 NEUROD1Q13562 356 aa13.8□□□□□ -0.2
ACTN1-215ENST00000555616 ITSN1Q15811 1721 aa13.8□□□□□ -0.2
ACTN1-215ENST00000555616 TRPM3Q9HCF6 1732 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-215ENST00000555616 ZEB1P37275 1124 aaPredicted RBP13.79□□□□□ -0.2
ACTN1-215ENST00000555616 KRT28Q7Z3Y7 464 aa13.79□□□□□ -0.2
ACTN1-215ENST00000555616 AFF2P51816 1311 aa13.79□□□□□ -0.2
ACTN1-215ENST00000555616 GPRASP1Q5JY77 1395 aa13.79□□□□□ -0.2
ACTN1-215ENST00000555616 CENPJQ9HC77 1338 aaPredicted RBP13.78□□□□□ -0.2
ACTN1-215ENST00000555616 QRICH2Q9H0J4 1663 aa13.78□□□□□ -0.2
ACTN1-215ENST00000555616 ARHGEF10O15013 1369 aa13.77□□□□□ -0.21
ACTN1-215ENST00000555616 ROCK2O75116 1388 aaKnown RBP13.77□□□□□ -0.21
ACTN1-215ENST00000555616 ADAMTS2O95450 1211 aa13.77□□□□□ -0.21
ACTN1-215ENST00000555616 PSME1Q06323 249 aa13.77□□□□□ -0.21
ACTN1-215ENST00000555616 C8orf37Q96NL8 207 aa13.77□□□□□ -0.21
ACTN1-215ENST00000555616 CDK12Q9NYV4 1490 aaPredicted RBP13.77□□□□□ -0.21
ACTN1-215ENST00000555616 ABCA3Q99758 1704 aa13.76□□□□□ -0.21
ACTN1-215ENST00000555616 RALGAPBQ86X10 1494 aa13.76□□□□□ -0.21
ACTN1-215ENST00000555616 TONSLQ96HA7 1378 aa13.76□□□□□ -0.21
ACTN1-215ENST00000555616 PMFBP1Q8TBY8 1022 aa13.76□□□□□ -0.21
ACTN1-215ENST00000555616 MARF1Q9Y4F3 1742 aaKnown RBP13.76□□□□□ -0.21
ACTN1-215ENST00000555616 ALS2Q96Q42 1657 aa13.75□□□□□ -0.21
ACTN1-215ENST00000555616 NUDT16Q96DE0 195 aaKnown RBP13.75□□□□□ -0.21
ACTN1-215ENST00000555616 POLR3AO14802 1390 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-215ENST00000555616 NBPF8Q3BBV2 869 aa13.74□□□□□ -0.21
ACTN1-215ENST00000555616 FNBP4Q8N3X1 1017 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-215ENST00000555616 CDK19Q9BWU1 502 aa13.74□□□□□ -0.21
ACTN1-215ENST00000555616 NGLY1Q96IV0 654 aa13.73□□□□□ -0.21
ACTN1-215ENST00000555616 ATRNO75882 1429 aa13.73□□□□□ -0.21
ACTN1-215ENST00000555616 SLIT2O94813 1529 aa13.72□□□□□ -0.21
ACTN1-215ENST00000555616 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.71□□□□□ -0.21
ACTN1-215ENST00000555616 CRYBG1Q9Y4K1 1723 aa13.71□□□□□ -0.21
ACTN1-215ENST00000555616 RXRBP28702 533 aa13.71□□□□□ -0.21
ACTN1-215ENST00000555616 NGDNQ8NEJ9 315 aaKnown RBP13.71□□□□□ -0.21
ACTN1-215ENST00000555616 TIMELESSQ9UNS1 1208 aa13.71□□□□□ -0.21
ACTN1-215ENST00000555616 CCDC61Q9Y6R9 512 aa13.71□□□□□ -0.21
ACTN1-215ENST00000555616 BCL9LQ86UU0 1499 aa13.71□□□□□ -0.21
ACTN1-215ENST00000555616 RGS12O14924 1447 aa13.71□□□□□ -0.22
ACTN1-215ENST00000555616 SBNO2Q9Y2G9 1366 aa13.71□□□□□ -0.22
ACTN1-215ENST00000555616 PLEKHG3A1L390 1219 aa13.7□□□□□ -0.22
ACTN1-215ENST00000555616 USP21Q9UK80 565 aa13.7□□□□□ -0.22
ACTN1-215ENST00000555616 RBM6P78332 1123 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms