RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 CHGAP10645 457 aaKnown RBP13.79□□□□□ -0.2
MTHFD1-210ENST00000555252 GGT6Q6P531 493 aa13.79□□□□□ -0.2
MTHFD1-210ENST00000555252 ZMYM3Q14202 1370 aa13.79□□□□□ -0.2
MTHFD1-210ENST00000555252 PLEKHH1Q9ULM0 1364 aa13.79□□□□□ -0.2
MTHFD1-210ENST00000555252 ADGRB1O14514 1584 aa13.79□□□□□ -0.2
MTHFD1-210ENST00000555252 ARHGAP31Q2M1Z3 1444 aa13.79□□□□□ -0.2
MTHFD1-210ENST00000555252 ZC3H13Q5T200 1668 aaKnown RBP13.79□□□□□ -0.2
MTHFD1-210ENST00000555252 DUSP27Q5VZP5 1158 aa13.79□□□□□ -0.2
MTHFD1-210ENST00000555252 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.79□□□□□ -0.2
MTHFD1-210ENST00000555252 NINLQ9Y2I6 1382 aa13.79□□□□□ -0.2
MTHFD1-210ENST00000555252 POLR3AO14802 1390 aaPredicted RBP13.78□□□□□ -0.2
MTHFD1-210ENST00000555252 CARD14Q9BXL6 1004 aa13.78□□□□□ -0.2
MTHFD1-210ENST00000555252 PIK3C2BO00750 1634 aa13.77□□□□□ -0.2
MTHFD1-210ENST00000555252 SLFN5Q08AF3 891 aa13.77□□□□□ -0.21
MTHFD1-210ENST00000555252 QRICH2Q9H0J4 1663 aa13.77□□□□□ -0.21
MTHFD1-210ENST00000555252 VGFO15240 615 aaPredicted RBP13.76□□□□□ -0.21
MTHFD1-210ENST00000555252 TRHP20396 242 aaPredicted RBP13.76□□□□□ -0.21
MTHFD1-210ENST00000555252 L1TD1Q5T7N2 865 aaKnown RBP13.76□□□□□ -0.21
MTHFD1-210ENST00000555252 TRMT2AQ8IZ69 625 aaKnown RBP13.76□□□□□ -0.21
MTHFD1-210ENST00000555252 USP32Q8NFA0 1604 aa13.76□□□□□ -0.21
MTHFD1-210ENST00000555252 DIP2CQ9Y2E4 1556 aa13.76□□□□□ -0.21
MTHFD1-210ENST00000555252 FRAT2O75474 233 aaPredicted RBP13.75□□□□□ -0.21
MTHFD1-210ENST00000555252 BECN1Q14457 450 aa13.75□□□□□ -0.21
MTHFD1-210ENST00000555252 C20orf194Q5TEA3 1177 aa13.75□□□□□ -0.21
MTHFD1-210ENST00000555252 ZFYVE9O95405 1425 aa13.74□□□□□ -0.21
MTHFD1-210ENST00000555252 MAPK8IP3Q9UPT6 1336 aa13.74□□□□□ -0.21
MTHFD1-210ENST00000555252 NKTRP30414 1462 aaKnown RBP13.74□□□□□ -0.21
MTHFD1-210ENST00000555252 E9PSI1 815 aa13.74□□□□□ -0.21
MTHFD1-210ENST00000555252 TRAK1Q9UPV9 953 aa13.74□□□□□ -0.21
MTHFD1-210ENST00000555252 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
MTHFD1-210ENST00000555252 SLC4A3P48751 1232 aa13.73□□□□□ -0.21
MTHFD1-210ENST00000555252 AAMPQ13685 434 aa13.73□□□□□ -0.21
MTHFD1-210ENST00000555252 SLC52A1Q9NWF4 448 aa13.73□□□□□ -0.21
MTHFD1-210ENST00000555252 NEXMIFQ5QGS0 1516 aa13.73□□□□□ -0.21
MTHFD1-210ENST00000555252 MORC1Q86VD1 984 aa13.72□□□□□ -0.21
MTHFD1-210ENST00000555252 NSD2O96028 1365 aa13.72□□□□□ -0.21
MTHFD1-210ENST00000555252 GLI2P10070 1586 aa13.72□□□□□ -0.21
MTHFD1-210ENST00000555252 EVC2Q86UK5 1308 aa13.72□□□□□ -0.21
MTHFD1-210ENST00000555252 RICTORQ6R327 1708 aa13.72□□□□□ -0.21
MTHFD1-210ENST00000555252 APAF1O14727 1248 aa13.71□□□□□ -0.21
MTHFD1-210ENST00000555252 FAM69CQ0P6D2 419 aa13.71□□□□□ -0.21
MTHFD1-210ENST00000555252 SIGLEC1Q9BZZ2 1709 aa13.71□□□□□ -0.21
MTHFD1-210ENST00000555252 DIP2BQ9P265 1576 aa13.71□□□□□ -0.21
MTHFD1-210ENST00000555252 CGNL1Q0VF96 1302 aa13.71□□□□□ -0.22
MTHFD1-210ENST00000555252 RAPGEF3O95398 923 aa13.7□□□□□ -0.22
MTHFD1-210ENST00000555252 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
MTHFD1-210ENST00000555252 SKAP1Q86WV1 359 aa13.7□□□□□ -0.22
MTHFD1-210ENST00000555252 CCDC146Q8IYE0 955 aa13.7□□□□□ -0.22
MTHFD1-210ENST00000555252 ANKRD36BQ8N2N9 1353 aa13.69□□□□□ -0.22
MTHFD1-210ENST00000555252 PDE3AQ14432 1141 aa13.68□□□□□ -0.22
MTHFD1-210ENST00000555252 TMEM132EQ6IEE7 984 aa13.68□□□□□ -0.22
MTHFD1-210ENST00000555252 ARHGEF28Q8N1W1 1705 aaKnown RBP13.68□□□□□ -0.22
MTHFD1-210ENST00000555252 CFAP53Q96M91 514 aa13.68□□□□□ -0.22
MTHFD1-210ENST00000555252 SLC12A5Q9H2X9 1139 aa13.68□□□□□ -0.22
MTHFD1-210ENST00000555252 NLRP1Q9C000 1473 aa13.68□□□□□ -0.22
MTHFD1-210ENST00000555252 USP19O94966 1318 aa13.68□□□□□ -0.22
MTHFD1-210ENST00000555252 EIF5BO60841 1220 aaKnown RBP13.68□□□□□ -0.22
MTHFD1-210ENST00000555252 CFAP65Q6ZU64 1925 aaKnown RBP13.67□□□□□ -0.22
MTHFD1-210ENST00000555252 RUNDC1Q96C34 613 aa13.67□□□□□ -0.22
MTHFD1-210ENST00000555252 SHPRHQ149N8 1683 aa13.66□□□□□ -0.22
MTHFD1-210ENST00000555252 TULP4Q9NRJ4 1543 aa13.66□□□□□ -0.22
MTHFD1-210ENST00000555252 RGS3P49796 1198 aa13.65□□□□□ -0.22
MTHFD1-210ENST00000555252 IDI1Q13907 227 aa13.65□□□□□ -0.22
MTHFD1-210ENST00000555252 CCDC27Q2M243 656 aa13.64□□□□□ -0.23
MTHFD1-210ENST00000555252 WWC1Q8IX03 1113 aa13.64□□□□□ -0.23
MTHFD1-210ENST00000555252 PREX1Q8TCU6 1659 aa13.64□□□□□ -0.23
MTHFD1-210ENST00000555252 GLIPR1L2Q4G1C9 344 aa13.63□□□□□ -0.23
MTHFD1-210ENST00000555252 WDR63Q8IWG1 891 aa13.63□□□□□ -0.23
MTHFD1-210ENST00000555252 PPP6R1Q9UPN7 881 aa13.63□□□□□ -0.23
MTHFD1-210ENST00000555252 YEATS2Q9ULM3 1422 aa13.63□□□□□ -0.23
MTHFD1-210ENST00000555252 TMEM131LA2VDJ0 1609 aa13.63□□□□□ -0.23
MTHFD1-210ENST00000555252 IQSEC2Q5JU85 1478 aa13.63□□□□□ -0.23
MTHFD1-210ENST00000555252 SPINK5Q9NQ38 1064 aaPredicted RBP13.63□□□□□ -0.23
MTHFD1-210ENST00000555252 ANTXR1Q9H6X2 564 aa13.62□□□□□ -0.23
MTHFD1-210ENST00000555252 UPF2Q9HAU5 1272 aaKnown RBP13.62□□□□□ -0.23
MTHFD1-210ENST00000555252 KIF13AQ9H1H9 1805 aa13.62□□□□□ -0.23
MTHFD1-210ENST00000555252 ATAD2Q6PL18 1390 aa13.62□□□□□ -0.23
MTHFD1-210ENST00000555252 PHF23Q9BUL5 403 aaPredicted RBP13.62□□□□□ -0.23
MTHFD1-210ENST00000555252 REREQ9P2R6 1566 aa13.61□□□□□ -0.23
MTHFD1-210ENST00000555252 MTHFSP49914 203 aa13.61□□□□□ -0.23
MTHFD1-210ENST00000555252 PMFBP1Q8TBY8 1022 aa13.61□□□□□ -0.23
MTHFD1-210ENST00000555252 POGKQ9P215 609 aa13.61□□□□□ -0.23
MTHFD1-210ENST00000555252 ISY1Q9ULR0 285 aaKnown RBP13.61□□□□□ -0.23
MTHFD1-210ENST00000555252 CLUAP1Q96AJ1 413 aa13.6□□□□□ -0.23
MTHFD1-210ENST00000555252 TSPOAP1O95153 1857 aa13.6□□□□□ -0.23
MTHFD1-210ENST00000555252 ABCC11Q96J66 1382 aa13.6□□□□□ -0.23
MTHFD1-210ENST00000555252 MED14O60244 1454 aa13.6□□□□□ -0.23
MTHFD1-210ENST00000555252 CLTCQ00610 1675 aaKnown RBP13.59□□□□□ -0.23
MTHFD1-210ENST00000555252 FSD2A1L4K1 749 aa13.59□□□□□ -0.23
MTHFD1-210ENST00000555252 TCP11L2Q8N4U5 519 aa13.59□□□□□ -0.23
MTHFD1-210ENST00000555252 AGLP35573 1532 aa13.59□□□□□ -0.23
MTHFD1-210ENST00000555252 TBC1D32Q96NH3 1257 aa13.59□□□□□ -0.23
MTHFD1-210ENST00000555252 TERF2IPQ9NYB0 399 aa13.59□□□□□ -0.23
MTHFD1-210ENST00000555252 PTPRMP28827 1452 aa13.58□□□□□ -0.24
MTHFD1-210ENST00000555252 BCAR3O75815 825 aa13.58□□□□□ -0.24
MTHFD1-210ENST00000555252 CLCN1P35523 988 aa13.58□□□□□ -0.24
MTHFD1-210ENST00000555252 TNNT2P45379 298 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-210ENST00000555252 NUTM2DQ5VT03 806 aaPredicted RBP13.58□□□□□ -0.24
MTHFD1-210ENST00000555252 YTHDC2Q9H6S0 1430 aaKnown RBP13.58□□□□□ -0.24
MTHFD1-210ENST00000555252 CABP2Q9NPB3 220 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 143 ms