RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 ESCO1Q5FWF5 840 aa36.29■■■■□ 3.4
FOXA1-204ENST00000554607 FNBP4Q8N3X1 1017 aaPredicted RBP36.28■■■■□ 3.4
FOXA1-204ENST00000554607 CDC42BPGQ6DT37 1551 aa36.25■■■■□ 3.39
FOXA1-204ENST00000554607 FOXD1Q16676 465 aa36.25■■■■□ 3.39
FOXA1-204ENST00000554607 CCDC144AA2RUR9 1427 aa36.25■■■■□ 3.39
FOXA1-204ENST00000554607 ADGRF5Q8IZF2 1346 aa36.24■■■■□ 3.39
FOXA1-204ENST00000554607 COL22A1Q8NFW1 1626 aaPredicted RBP36.23■■■■□ 3.39
FOXA1-204ENST00000554607 LRPPRCP42704 1394 aaKnown RBP36.21■■■■□ 3.39
FOXA1-204ENST00000554607 RGL3Q3MIN7 710 aa36.21■■■■□ 3.39
FOXA1-204ENST00000554607 ATAD2Q6PL18 1390 aa36.21■■■■□ 3.39
FOXA1-204ENST00000554607 ANKRD30BQ9BXX2 1392 aa36.21■■■■□ 3.39
FOXA1-204ENST00000554607 STK26Q9P289 416 aa36.2■■■■□ 3.39
FOXA1-204ENST00000554607 TECPR2O15040 1411 aa36.18■■■■□ 3.38
FOXA1-204ENST00000554607 FOXO3O43524 673 aa36.18■■■■□ 3.38
FOXA1-204ENST00000554607 MYOM2P54296 1465 aa36.17■■■■□ 3.38
FOXA1-204ENST00000554607 WAPLQ7Z5K2 1190 aa36.16■■■■□ 3.38
FOXA1-204ENST00000554607 PXDNQ92626 1479 aa36.16■■■■□ 3.38
FOXA1-204ENST00000554607 ATRNO75882 1429 aa36.16■■■■□ 3.38
FOXA1-204ENST00000554607 SPATA31E1Q6ZUB1 1445 aa36.16■■■■□ 3.38
FOXA1-204ENST00000554607 ABCC11Q96J66 1382 aa36.15■■■■□ 3.38
FOXA1-204ENST00000554607 MPHOSPH9Q99550 1183 aa36.15■■■■□ 3.38
FOXA1-204ENST00000554607 XPCQ01831 940 aaPredicted RBP36.12■■■■□ 3.37
FOXA1-204ENST00000554607 NUTM2FA1L443 756 aa36.1■■■■□ 3.37
FOXA1-204ENST00000554607 TMEM132EQ6IEE7 984 aa36.1■■■■□ 3.37
FOXA1-204ENST00000554607 BCL9LQ86UU0 1499 aa36.07■■■■□ 3.37
FOXA1-204ENST00000554607 IFT172Q9UG01 1749 aa36.07■■■■□ 3.36
FOXA1-204ENST00000554607 PIK3C2GO75747 1445 aa36.07■■■■□ 3.36
FOXA1-204ENST00000554607 KNDC1Q76NI1 1749 aa36.05■■■■□ 3.36
FOXA1-204ENST00000554607 SIRT1Q96EB6 747 aa36.05■■■■□ 3.36
FOXA1-204ENST00000554607 ACIN1Q9UKV3 1341 aaKnown RBP36.05■■■■□ 3.36
FOXA1-204ENST00000554607 PLEKHH1Q9ULM0 1364 aa36.04■■■■□ 3.36
FOXA1-204ENST00000554607 MARF1Q9Y4F3 1742 aaKnown RBP36.04■■■■□ 3.36
FOXA1-204ENST00000554607 YTHDC2Q9H6S0 1430 aaKnown RBP36.03■■■■□ 3.36
FOXA1-204ENST00000554607 GJD4Q96KN9 370 aaPredicted RBP36.03■■■■□ 3.36
FOXA1-204ENST00000554607 CCDC125Q86Z20 511 aa36.01■■■■□ 3.36
FOXA1-204ENST00000554607 SPATA31A3Q5VYP0 1347 aa36■■■■□ 3.35
FOXA1-204ENST00000554607 FMN2Q9NZ56 1722 aa35.99■■■■□ 3.35
FOXA1-204ENST00000554607 C14orf93Q9H972 538 aaKnown RBP35.98■■■■□ 3.35
FOXA1-204ENST00000554607 KIF1AQ12756 1690 aa35.97■■■■□ 3.35
FOXA1-204ENST00000554607 KRT28Q7Z3Y7 464 aa35.97■■■■□ 3.35
FOXA1-204ENST00000554607 UNC5CLQ8IV45 518 aa35.96■■■■□ 3.35
FOXA1-204ENST00000554607 DHX57Q6P158 1386 aaKnown RBP35.93■■■■□ 3.34
FOXA1-204ENST00000554607 PSME1Q06323 249 aa35.93■■■■□ 3.34
FOXA1-204ENST00000554607 ZRANB1Q9UGI0 708 aa35.93■■■■□ 3.34
FOXA1-204ENST00000554607 PHF8Q9UPP1 1060 aa35.92■■■■□ 3.34
FOXA1-204ENST00000554607 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.91■■■■□ 3.34
FOXA1-204ENST00000554607 SLIT2O94813 1529 aa35.9■■■■□ 3.34
FOXA1-204ENST00000554607 HAP1P54257 671 aaPredicted RBP35.88■■■■□ 3.33
FOXA1-204ENST00000554607 CFAP70Q5T0N1 1121 aa35.88■■■■□ 3.33
FOXA1-204ENST00000554607 EP400Q96L91 3159 aa35.87■■■■□ 3.33
FOXA1-204ENST00000554607 NRXN1Q9ULB1 1477 aa35.86■■■■□ 3.33
FOXA1-204ENST00000554607 RALGAPBQ86X10 1494 aa35.86■■■■□ 3.33
FOXA1-204ENST00000554607 TNS3Q68CZ2 1445 aa35.84■■■■□ 3.33
FOXA1-204ENST00000554607 USP32Q8NFA0 1604 aa35.83■■■■□ 3.33
FOXA1-204ENST00000554607 PRAM1Q96QH2 718 aa35.83■■■■□ 3.33
FOXA1-204ENST00000554607 SBNO1A3KN83 1393 aa35.82■■■■□ 3.32
FOXA1-204ENST00000554607 GLI3P10071 1580 aa35.81■■■■□ 3.32
FOXA1-204ENST00000554607 SRCAPQ6ZRS2 3230 aa35.8■■■■□ 3.32
FOXA1-204ENST00000554607 RGPD8O14715 1765 aaPredicted RBP35.8■■■■□ 3.32
FOXA1-204ENST00000554607 POGKQ9P215 609 aa35.8■■■■□ 3.32
FOXA1-204ENST00000554607 SAFB2Q14151 953 aaKnown RBP eCLIP35.79■■■■□ 3.32
FOXA1-204ENST00000554607 ARHGEF10O15013 1369 aa35.78■■■■□ 3.32
FOXA1-204ENST00000554607 VPS72Q15906 364 aa35.77■■■■□ 3.32
FOXA1-204ENST00000554607 LMOD2Q6P5Q4 547 aa35.77■■■■□ 3.32
FOXA1-204ENST00000554607 CABLES1Q8TDN4 633 aa35.77■■■■□ 3.32
FOXA1-204ENST00000554607 BLMP54132 1417 aaPredicted RBP35.75■■■■□ 3.31
FOXA1-204ENST00000554607 DLC1Q96QB1 1528 aa35.74■■■■□ 3.31
FOXA1-204ENST00000554607 ANKARQ7Z5J8 1434 aa35.74■■■■□ 3.31
FOXA1-204ENST00000554607 SEPT12Q8IYM1 358 aa35.73■■■■□ 3.31
FOXA1-204ENST00000554607 PLEKHG5O94827 1062 aa35.72■■■■□ 3.31
FOXA1-204ENST00000554607 CCDC9Q9Y3X0 531 aaKnown RBP35.71■■■■□ 3.31
FOXA1-204ENST00000554607 ONECUT3O60422 494 aaPredicted RBP35.7■■■■□ 3.31
FOXA1-204ENST00000554607 PMFBP1Q8TBY8 1022 aa35.7■■■■□ 3.31
FOXA1-204ENST00000554607 NWD2Q9ULI1 1742 aa35.69■■■■□ 3.3
FOXA1-204ENST00000554607 SF3B2Q13435 895 aaKnown RBP35.69■■■■□ 3.3
FOXA1-204ENST00000554607 BRWD3Q6RI45 1802 aa35.66■■■■□ 3.3
FOXA1-204ENST00000554607 PLCH1Q4KWH8 1693 aa35.65■■■■□ 3.3
FOXA1-204ENST00000554607 EIF3AQ14152 1382 aaKnown RBP35.65■■■■□ 3.3
FOXA1-204ENST00000554607 FAM83GA6ND36 823 aa35.65■■■■□ 3.3
FOXA1-204ENST00000554607 ADGRB2O60241 1585 aa35.64■■■■□ 3.3
FOXA1-204ENST00000554607 TRAK1Q9UPV9 953 aa35.64■■■■□ 3.3
FOXA1-204ENST00000554607 KRT27Q7Z3Y8 459 aa35.63■■■■□ 3.29
FOXA1-204ENST00000554607 GPRASP1Q5JY77 1395 aa35.63■■■■□ 3.29
FOXA1-204ENST00000554607 RAB3GAP2Q9H2M9 1393 aa35.63■■■■□ 3.29
FOXA1-204ENST00000554607 ABCA3Q99758 1704 aa35.62■■■■□ 3.29
FOXA1-204ENST00000554607 ADGRB1O14514 1584 aa35.61■■■■□ 3.29
FOXA1-204ENST00000554607 DEFB132Q7Z7B7 95 aa35.6■■■■□ 3.29
FOXA1-204ENST00000554607 STAC3Q96MF2 364 aa35.6■■■■□ 3.29
FOXA1-204ENST00000554607 HIRIP3Q9BW71 556 aaPredicted RBP35.6■■■■□ 3.29
FOXA1-204ENST00000554607 MINK1Q8N4C8 1332 aaPredicted RBP35.57■■■■□ 3.29
FOXA1-204ENST00000554607 KDM2AQ9Y2K7 1162 aa35.57■■■■□ 3.28
FOXA1-204ENST00000554607 DCAF11Q8TEB1 546 aa35.56■■■■□ 3.28
FOXA1-204ENST00000554607 A0A0G2JS52 829 aa35.55■■■■□ 3.28
FOXA1-204ENST00000554607 WASLO00401 505 aaPredicted RBP35.55■■■■□ 3.28
FOXA1-204ENST00000554607 MYT1Q01538 1121 aa35.55■■■■□ 3.28
FOXA1-204ENST00000554607 BTG4Q9NY30 223 aa35.55■■■■□ 3.28
FOXA1-204ENST00000554607 TRPM3Q9HCF6 1732 aaPredicted RBP35.54■■■■□ 3.28
FOXA1-204ENST00000554607 PRR36Q9H6K5 1346 aa35.53■■■■□ 3.28
FOXA1-204ENST00000554607 TULP4Q9NRJ4 1543 aa35.52■■■■□ 3.28
FOXA1-204ENST00000554607 NGDNQ8NEJ9 315 aaKnown RBP35.52■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms