RNA–Protein interactions for RNA: ENST00000552862.1

CDK4-214, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-214ENST00000552862 CCDC125Q86Z20 511 aa18.43■□□□□ 0.54
CDK4-214ENST00000552862 ROBO2Q9HCK4 1378 aa18.42■□□□□ 0.54
CDK4-214ENST00000552862 LRP6O75581 1613 aa18.42■□□□□ 0.54
CDK4-214ENST00000552862 USP21Q9UK80 565 aa18.42■□□□□ 0.54
CDK4-214ENST00000552862 NHSL1Q5SYE7 1610 aa18.41■□□□□ 0.54
CDK4-214ENST00000552862 FNBP4Q8N3X1 1017 aaPredicted RBP18.41■□□□□ 0.54
CDK4-214ENST00000552862 ORAI2Q96SN7 254 aa18.41■□□□□ 0.54
CDK4-214ENST00000552862 DHX57Q6P158 1386 aaKnown RBP18.41■□□□□ 0.54
CDK4-214ENST00000552862 ADAMTS2O95450 1211 aa18.4■□□□□ 0.54
CDK4-214ENST00000552862 STK26Q9P289 416 aa18.38■□□□□ 0.53
CDK4-214ENST00000552862 TECPR2O15040 1411 aa18.38■□□□□ 0.53
CDK4-214ENST00000552862 HRCP23327 699 aa18.37■□□□□ 0.53
CDK4-214ENST00000552862 C14orf93Q9H972 538 aaKnown RBP18.37■□□□□ 0.53
CDK4-214ENST00000552862 FOXO3O43524 673 aa18.36■□□□□ 0.53
CDK4-214ENST00000552862 LAMC1P11047 1609 aa18.36■□□□□ 0.53
CDK4-214ENST00000552862 ATAD2Q6PL18 1390 aa18.36■□□□□ 0.53
CDK4-214ENST00000552862 ADGRF5Q8IZF2 1346 aa18.35■□□□□ 0.53
CDK4-214ENST00000552862 SPATA31E1Q6ZUB1 1445 aa18.34■□□□□ 0.53
CDK4-214ENST00000552862 HAP1P54257 671 aaPredicted RBP18.34■□□□□ 0.53
CDK4-214ENST00000552862 CDC42BPGQ6DT37 1551 aa18.34■□□□□ 0.53
CDK4-214ENST00000552862 EIF3AQ14152 1382 aaKnown RBP18.33■□□□□ 0.53
CDK4-214ENST00000552862 PPLO60437 1756 aa18.33■□□□□ 0.53
CDK4-214ENST00000552862 DDX17Q92841 729 aaKnown RBP18.33■□□□□ 0.52
CDK4-214ENST00000552862 NALCNQ8IZF0 1738 aa18.32■□□□□ 0.52
CDK4-214ENST00000552862 POGKQ9P215 609 aa18.32■□□□□ 0.52
CDK4-214ENST00000552862 SETD1AO15047 1707 aaKnown RBP18.32■□□□□ 0.52
CDK4-214ENST00000552862 PIK3C2GO75747 1445 aa18.31■□□□□ 0.52
CDK4-214ENST00000552862 YTHDC2Q9H6S0 1430 aaKnown RBP18.31■□□□□ 0.52
CDK4-214ENST00000552862 KRT28Q7Z3Y7 464 aa18.3■□□□□ 0.52
CDK4-214ENST00000552862 WAPLQ7Z5K2 1190 aa18.3■□□□□ 0.52
CDK4-214ENST00000552862 TMEM132EQ6IEE7 984 aa18.29■□□□□ 0.52
CDK4-214ENST00000552862 PHF8Q9UPP1 1060 aa18.29■□□□□ 0.52
CDK4-214ENST00000552862 GJD4Q96KN9 370 aaPredicted RBP18.28■□□□□ 0.52
CDK4-214ENST00000552862 SPATA31A3Q5VYP0 1347 aa18.27■□□□□ 0.52
CDK4-214ENST00000552862 UNC5CLQ8IV45 518 aa18.27■□□□□ 0.52
CDK4-214ENST00000552862 ARHGEF10O15013 1369 aa18.27■□□□□ 0.51
CDK4-214ENST00000552862 ZRANB1Q9UGI0 708 aa18.25■□□□□ 0.51
CDK4-214ENST00000552862 SF3B2Q13435 895 aaKnown RBP18.24■□□□□ 0.51
CDK4-214ENST00000552862 SBNO1A3KN83 1393 aa18.24■□□□□ 0.51
CDK4-214ENST00000552862 MYOM2P54296 1465 aa18.24■□□□□ 0.51
CDK4-214ENST00000552862 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
CDK4-214ENST00000552862 GPRASP1Q5JY77 1395 aa18.23■□□□□ 0.51
CDK4-214ENST00000552862 ATRNO75882 1429 aa18.23■□□□□ 0.51
CDK4-214ENST00000552862 NUTM2FA1L443 756 aa18.22■□□□□ 0.51
CDK4-214ENST00000552862 CFAP70Q5T0N1 1121 aa18.22■□□□□ 0.51
CDK4-214ENST00000552862 PRAM1Q96QH2 718 aa18.22■□□□□ 0.51
CDK4-214ENST00000552862 RGS12O14924 1447 aa18.22■□□□□ 0.51
CDK4-214ENST00000552862 ANKARQ7Z5J8 1434 aa18.22■□□□□ 0.51
CDK4-214ENST00000552862 KIF1AQ12756 1690 aa18.22■□□□□ 0.51
CDK4-214ENST00000552862 PXDNQ92626 1479 aa18.21■□□□□ 0.51
CDK4-214ENST00000552862 KNDC1Q76NI1 1749 aa18.2■□□□□ 0.5
CDK4-214ENST00000552862 NRXN1Q9ULB1 1477 aa18.2■□□□□ 0.5
CDK4-214ENST00000552862 LMOD2Q6P5Q4 547 aa18.19■□□□□ 0.5
CDK4-214ENST00000552862 XPCQ01831 940 aaPredicted RBP18.18■□□□□ 0.5
CDK4-214ENST00000552862 VPS72Q15906 364 aa18.18■□□□□ 0.5
CDK4-214ENST00000552862 DCAF11Q8TEB1 546 aa18.18■□□□□ 0.5
CDK4-214ENST00000552862 DLC1Q96QB1 1528 aa18.18■□□□□ 0.5
CDK4-214ENST00000552862 RAB3GAP2Q9H2M9 1393 aa18.17■□□□□ 0.5
CDK4-214ENST00000552862 BCL9LQ86UU0 1499 aa18.17■□□□□ 0.5
CDK4-214ENST00000552862 TNS3Q68CZ2 1445 aa18.16■□□□□ 0.5
CDK4-214ENST00000552862 CCDC9Q9Y3X0 531 aaKnown RBP18.16■□□□□ 0.5
CDK4-214ENST00000552862 IFT172Q9UG01 1749 aa18.15■□□□□ 0.5
CDK4-214ENST00000552862 NGDNQ8NEJ9 315 aaKnown RBP18.15■□□□□ 0.5
CDK4-214ENST00000552862 PLEKHH1Q9ULM0 1364 aa18.15■□□□□ 0.5
CDK4-214ENST00000552862 WASLO00401 505 aaPredicted RBP18.14■□□□□ 0.49
CDK4-214ENST00000552862 ONECUT3O60422 494 aaPredicted RBP18.14■□□□□ 0.49
CDK4-214ENST00000552862 TRAK1Q9UPV9 953 aa18.13■□□□□ 0.49
CDK4-214ENST00000552862 KDM2AQ9Y2K7 1162 aa18.13■□□□□ 0.49
CDK4-214ENST00000552862 FMN2Q9NZ56 1722 aa18.12■□□□□ 0.49
CDK4-214ENST00000552862 SAFB2Q14151 953 aaKnown RBP eCLIP18.12■□□□□ 0.49
CDK4-214ENST00000552862 SLIT2O94813 1529 aa18.12■□□□□ 0.49
CDK4-214ENST00000552862 BLMP54132 1417 aaPredicted RBP18.09■□□□□ 0.49
CDK4-214ENST00000552862 PMFBP1Q8TBY8 1022 aa18.09■□□□□ 0.49
CDK4-214ENST00000552862 C11orf95C9JLR9 678 aaPredicted RBP18.08■□□□□ 0.48
CDK4-214ENST00000552862 KRT27Q7Z3Y8 459 aa18.08■□□□□ 0.48
CDK4-214ENST00000552862 SEPT12Q8IYM1 358 aa18.08■□□□□ 0.48
CDK4-214ENST00000552862 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.07■□□□□ 0.48
CDK4-214ENST00000552862 MARF1Q9Y4F3 1742 aaKnown RBP18.07■□□□□ 0.48
CDK4-214ENST00000552862 PAK3O75914 559 aaPredicted RBP18.07■□□□□ 0.48
CDK4-214ENST00000552862 CCDC61Q9Y6R9 512 aa18.07■□□□□ 0.48
CDK4-214ENST00000552862 A0A0G2JS52 829 aa18.06■□□□□ 0.48
CDK4-214ENST00000552862 BAG6P46379 1132 aa18.06■□□□□ 0.48
CDK4-214ENST00000552862 MYT1Q01538 1121 aa18.06■□□□□ 0.48
CDK4-214ENST00000552862 RALGAPBQ86X10 1494 aa18.06■□□□□ 0.48
CDK4-214ENST00000552862 MINK1Q8N4C8 1332 aaPredicted RBP18.05■□□□□ 0.48
CDK4-214ENST00000552862 FAM83GA6ND36 823 aa18.04■□□□□ 0.48
CDK4-214ENST00000552862 NUDT16Q96DE0 195 aaKnown RBP18.04■□□□□ 0.48
CDK4-214ENST00000552862 BTG4Q9NY30 223 aa18.04■□□□□ 0.48
CDK4-214ENST00000552862 USP32Q8NFA0 1604 aa18.04■□□□□ 0.48
CDK4-214ENST00000552862 ADGRB2O60241 1585 aa18.04■□□□□ 0.48
CDK4-214ENST00000552862 BRD4O60885 1362 aaPredicted RBP18.04■□□□□ 0.48
CDK4-214ENST00000552862 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
CDK4-214ENST00000552862 HIRIP3Q9BW71 556 aaPredicted RBP18.03■□□□□ 0.48
CDK4-214ENST00000552862 PRDM11Q9NQV5 511 aa18.03■□□□□ 0.48
CDK4-214ENST00000552862 TULP4Q9NRJ4 1543 aa18.02■□□□□ 0.47
CDK4-214ENST00000552862 NWD2Q9ULI1 1742 aa18.01■□□□□ 0.47
CDK4-214ENST00000552862 EVA1CP58658 441 aa18■□□□□ 0.47
CDK4-214ENST00000552862 CDK19Q9BWU1 502 aa18■□□□□ 0.47
CDK4-214ENST00000552862 ADGRB1O14514 1584 aa18■□□□□ 0.47
CDK4-214ENST00000552862 PLEKHG3A1L390 1219 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms