RNA–Protein interactions for RNA: ENST00000552296.6

PCBP2-222, Transcript of poly(rC) binding protein 2, human

APPRIS ALT1 TSL 5 BASIC

Gene PCBP2, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCBP2-222	ENST00000552296	CDC42BPG	Q6DT37	1551 aa		13.6	□□□□□ -0.23
PCBP2-222	ENST00000552296	KNDC1	Q76NI1	1749 aa		13.58	□□□□□ -0.23
PCBP2-222	ENST00000552296	ORAI2	Q96SN7	254 aa		13.58	□□□□□ -0.24
PCBP2-222	ENST00000552296	RBM6	P78332	1123 aa	Known RBP	13.57	□□□□□ -0.24
PCBP2-222	ENST00000552296	C8orf37	Q96NL8	207 aa		13.57	□□□□□ -0.24
PCBP2-222	ENST00000552296	QTRT2	Q9H974	415 aa	Known RBP	13.57	□□□□□ -0.24
PCBP2-222	ENST00000552296	MYOM2	P54296	1465 aa		13.57	□□□□□ -0.24
PCBP2-222	ENST00000552296	PXDN	Q92626	1479 aa		13.57	□□□□□ -0.24
PCBP2-222	ENST00000552296	VGF	O15240	615 aa	Predicted RBP	13.56	□□□□□ -0.24
PCBP2-222	ENST00000552296	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.56	□□□□□ -0.24
PCBP2-222	ENST00000552296	RPGRIP1L	Q68CZ1	1315 aa		13.56	□□□□□ -0.24
PCBP2-222	ENST00000552296	TECPR2	O15040	1411 aa		13.55	□□□□□ -0.24
PCBP2-222	ENST00000552296	FMN2	Q9NZ56	1722 aa		13.54	□□□□□ -0.24
PCBP2-222	ENST00000552296	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.54	□□□□□ -0.24
PCBP2-222	ENST00000552296	ATRN	O75882	1429 aa		13.53	□□□□□ -0.24
PCBP2-222	ENST00000552296	SPATA31E1	Q6ZUB1	1445 aa		13.53	□□□□□ -0.24
PCBP2-222	ENST00000552296	RGPD8	O14715	1765 aa	Predicted RBP	13.53	□□□□□ -0.24
PCBP2-222	ENST00000552296	BCL9L	Q86UU0	1499 aa		13.52	□□□□□ -0.25
PCBP2-222	ENST00000552296	ADAMTS2	O95450	1211 aa		13.51	□□□□□ -0.25
PCBP2-222	ENST00000552296	NGLY1	Q96IV0	654 aa		13.51	□□□□□ -0.25
PCBP2-222	ENST00000552296	ADGRF5	Q8IZF2	1346 aa		13.5	□□□□□ -0.25
PCBP2-222	ENST00000552296	BRWD3	Q6RI45	1802 aa		13.5	□□□□□ -0.25
PCBP2-222	ENST00000552296	KIF1A	Q12756	1690 aa		13.49	□□□□□ -0.25
PCBP2-222	ENST00000552296	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.49	□□□□□ -0.25
PCBP2-222	ENST00000552296	USP21	Q9UK80	565 aa		13.49	□□□□□ -0.25
PCBP2-222	ENST00000552296	ABCA3	Q99758	1704 aa		13.49	□□□□□ -0.25
PCBP2-222	ENST00000552296	GLI3	P10071	1580 aa		13.48	□□□□□ -0.25
PCBP2-222	ENST00000552296	PIK3C2G	O75747	1445 aa		13.48	□□□□□ -0.25
PCBP2-222	ENST00000552296	LRPPRC	P42704	1394 aa	Known RBP	13.47	□□□□□ -0.25
PCBP2-222	ENST00000552296	ATAD2	Q6PL18	1390 aa		13.47	□□□□□ -0.25
PCBP2-222	ENST00000552296	ABCC11	Q96J66	1382 aa		13.47	□□□□□ -0.25
PCBP2-222	ENST00000552296	NPHP3	Q7Z494	1330 aa		13.47	□□□□□ -0.25
PCBP2-222	ENST00000552296	TRPC5	Q9UL62	973 aa	Predicted RBP	13.47	□□□□□ -0.25
PCBP2-222	ENST00000552296	PLEKHH1	Q9ULM0	1364 aa		13.46	□□□□□ -0.25
PCBP2-222	ENST00000552296	USP32	Q8NFA0	1604 aa		13.46	□□□□□ -0.25
PCBP2-222	ENST00000552296	SLIT2	O94813	1529 aa		13.46	□□□□□ -0.25
PCBP2-222	ENST00000552296	NRXN1	Q9ULB1	1477 aa		13.46	□□□□□ -0.25
PCBP2-222	ENST00000552296	DCAF8L1	A6NGE4	600 aa		13.45	□□□□□ -0.26
PCBP2-222	ENST00000552296	CCDC144A	A2RUR9	1427 aa		13.45	□□□□□ -0.26
PCBP2-222	ENST00000552296	ANKRD30B	Q9BXX2	1392 aa		13.45	□□□□□ -0.26
PCBP2-222	ENST00000552296	FOXO3	O43524	673 aa		13.44	□□□□□ -0.26
PCBP2-222	ENST00000552296	ESCO1	Q5FWF5	840 aa		13.44	□□□□□ -0.26
PCBP2-222	ENST00000552296	WAPL	Q7Z5K2	1190 aa		13.44	□□□□□ -0.26
PCBP2-222	ENST00000552296	PLCH1	Q4KWH8	1693 aa		13.44	□□□□□ -0.26
PCBP2-222	ENST00000552296	NWD2	Q9ULI1	1742 aa		13.44	□□□□□ -0.26
PCBP2-222	ENST00000552296	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.43	□□□□□ -0.26
PCBP2-222	ENST00000552296	XPC	Q01831	940 aa	Predicted RBP	13.42	□□□□□ -0.26
PCBP2-222	ENST00000552296	SPATA31A3	Q5VYP0	1347 aa		13.42	□□□□□ -0.26
PCBP2-222	ENST00000552296	TMEM132E	Q6IEE7	984 aa		13.41	□□□□□ -0.26
PCBP2-222	ENST00000552296	RALGAPB	Q86X10	1494 aa		13.41	□□□□□ -0.26
PCBP2-222	ENST00000552296	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.41	□□□□□ -0.26
PCBP2-222	ENST00000552296	GJD4	Q96KN9	370 aa	Predicted RBP	13.4	□□□□□ -0.26
PCBP2-222	ENST00000552296	MPHOSPH9	Q99550	1183 aa		13.4	□□□□□ -0.26
PCBP2-222	ENST00000552296	NUTM2F	A1L443	756 aa		13.39	□□□□□ -0.27
PCBP2-222	ENST00000552296	RGL3	Q3MIN7	710 aa		13.39	□□□□□ -0.27
PCBP2-222	ENST00000552296	SIRT1	Q96EB6	747 aa		13.39	□□□□□ -0.27
PCBP2-222	ENST00000552296	STK26	Q9P289	416 aa		13.39	□□□□□ -0.27
PCBP2-222	ENST00000552296	NRAP	Q86VF7	1730 aa		13.39	□□□□□ -0.27
PCBP2-222	ENST00000552296	CRYBG1	Q9Y4K1	1723 aa		13.39	□□□□□ -0.27
PCBP2-222	ENST00000552296	ADGRB2	O60241	1585 aa		13.39	□□□□□ -0.27
PCBP2-222	ENST00000552296	ALS2	Q96Q42	1657 aa		13.38	□□□□□ -0.27
PCBP2-222	ENST00000552296	TNS3	Q68CZ2	1445 aa		13.38	□□□□□ -0.27
PCBP2-222	ENST00000552296	DLC1	Q96QB1	1528 aa		13.38	□□□□□ -0.27
PCBP2-222	ENST00000552296	ADGRB1	O14514	1584 aa		13.37	□□□□□ -0.27
PCBP2-222	ENST00000552296	CCDC125	Q86Z20	511 aa		13.37	□□□□□ -0.27
PCBP2-222	ENST00000552296	UNC5CL	Q8IV45	518 aa		13.37	□□□□□ -0.27
PCBP2-222	ENST00000552296	C14orf93	Q9H972	538 aa	Known RBP	13.37	□□□□□ -0.27
PCBP2-222	ENST00000552296	CNKSR2	Q8WXI2	1034 aa		13.36	□□□□□ -0.27
PCBP2-222	ENST00000552296	SBNO1	A3KN83	1393 aa		13.35	□□□□□ -0.27
PCBP2-222	ENST00000552296	KRT28	Q7Z3Y7	464 aa		13.35	□□□□□ -0.27
PCBP2-222	ENST00000552296	BLM	P54132	1417 aa	Predicted RBP	13.35	□□□□□ -0.27
PCBP2-222	ENST00000552296	ONECUT3	O60422	494 aa	Predicted RBP	13.34	□□□□□ -0.27
PCBP2-222	ENST00000552296	CFAP70	Q5T0N1	1121 aa		13.33	□□□□□ -0.28
PCBP2-222	ENST00000552296	PHF8	Q9UPP1	1060 aa		13.33	□□□□□ -0.28
PCBP2-222	ENST00000552296	ANKAR	Q7Z5J8	1434 aa		13.32	□□□□□ -0.28
PCBP2-222	ENST00000552296	LRP5	O75197	1615 aa		13.32	□□□□□ -0.28
PCBP2-222	ENST00000552296	VPS72	Q15906	364 aa		13.32	□□□□□ -0.28
PCBP2-222	ENST00000552296	ZRANB1	Q9UGI0	708 aa		13.32	□□□□□ -0.28
PCBP2-222	ENST00000552296	DHX57	Q6P158	1386 aa	Known RBP	13.31	□□□□□ -0.28
PCBP2-222	ENST00000552296	COL14A1	Q05707	1796 aa	Known RBP	13.31	□□□□□ -0.28
PCBP2-222	ENST00000552296	HOXD11	P31277	338 aa	Predicted RBP	13.31	□□□□□ -0.28
PCBP2-222	ENST00000552296	CABLES1	Q8TDN4	633 aa		13.31	□□□□□ -0.28
PCBP2-222	ENST00000552296	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.3	□□□□□ -0.28
PCBP2-222	ENST00000552296	ARHGEF10	O15013	1369 aa		13.3	□□□□□ -0.28
PCBP2-222	ENST00000552296	SEPT12	Q8IYM1	358 aa		13.29	□□□□□ -0.28
PCBP2-222	ENST00000552296	PRAM1	Q96QH2	718 aa		13.29	□□□□□ -0.28
PCBP2-222	ENST00000552296	THSD7A	Q9UPZ6	1657 aa		13.29	□□□□□ -0.28
PCBP2-222	ENST00000552296	TNS1	Q9HBL0	1735 aa	Known RBP	13.29	□□□□□ -0.28
PCBP2-222	ENST00000552296	TULP4	Q9NRJ4	1543 aa		13.28	□□□□□ -0.28
PCBP2-222	ENST00000552296	FAM83G	A6ND36	823 aa		13.28	□□□□□ -0.28
PCBP2-222	ENST00000552296	PSME1	Q06323	249 aa		13.28	□□□□□ -0.28
PCBP2-222	ENST00000552296	ITSN1	Q15811	1721 aa		13.28	□□□□□ -0.28
PCBP2-222	ENST00000552296	RGPD1	P0DJD0	1748 aa		13.27	□□□□□ -0.28
PCBP2-222	ENST00000552296	DEFB132	Q7Z7B7	95 aa		13.27	□□□□□ -0.29
PCBP2-222	ENST00000552296	PRR36	Q9H6K5	1346 aa		13.27	□□□□□ -0.29
PCBP2-222	ENST00000552296	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.27	□□□□□ -0.29
PCBP2-222	ENST00000552296	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
PCBP2-222	ENST00000552296	ACIN1	Q9UKV3	1341 aa	Known RBP	13.26	□□□□□ -0.29
PCBP2-222	ENST00000552296	TOPAZ1	Q8N9V7	1692 aa		13.26	□□□□□ -0.29
PCBP2-222	ENST00000552296	PMFBP1	Q8TBY8	1022 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms