RNA–Protein interactions for RNA: ENST00000552254.5

CDK4-211, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-211ENST00000552254 DHX57Q6P158 1386 aaKnown RBP13.37□□□□□ -0.27
CDK4-211ENST00000552254 NALCNQ8IZF0 1738 aa13.37□□□□□ -0.27
CDK4-211ENST00000552254 YY1P25490 414 aa13.37□□□□□ -0.27
CDK4-211ENST00000552254 ADAMTS2O95450 1211 aa13.36□□□□□ -0.27
CDK4-211ENST00000552254 LRRC59Q96AG4 307 aaKnown RBP13.36□□□□□ -0.27
CDK4-211ENST00000552254 CEP350Q5VT06 3117 aa13.35□□□□□ -0.27
CDK4-211ENST00000552254 ADGRF5Q8IZF2 1346 aa13.34□□□□□ -0.27
CDK4-211ENST00000552254 PNPLA6Q8IY17 1366 aa13.32□□□□□ -0.28
CDK4-211ENST00000552254 DCCP43146 1447 aa13.32□□□□□ -0.28
CDK4-211ENST00000552254 MST1RQ04912 1400 aa13.32□□□□□ -0.28
CDK4-211ENST00000552254 MYOM2P54296 1465 aa13.32□□□□□ -0.28
CDK4-211ENST00000552254 USP21Q9UK80 565 aa13.32□□□□□ -0.28
CDK4-211ENST00000552254 TRPC5Q9UL62 973 aaPredicted RBP13.32□□□□□ -0.28
CDK4-211ENST00000552254 ROBO2Q9HCK4 1378 aa13.32□□□□□ -0.28
CDK4-211ENST00000552254 ADGRL3Q9HAR2 1447 aa13.31□□□□□ -0.28
CDK4-211ENST00000552254 NRXN1Q9ULB1 1477 aa13.31□□□□□ -0.28
CDK4-211ENST00000552254 DDX17Q92841 729 aaKnown RBP13.31□□□□□ -0.28
CDK4-211ENST00000552254 SIN3AQ96ST3 1273 aa13.31□□□□□ -0.28
CDK4-211ENST00000552254 PIK3C2GO75747 1445 aa13.3□□□□□ -0.28
CDK4-211ENST00000552254 SENP3-EIF4A1A0A087X0R7 540 aa13.29□□□□□ -0.28
CDK4-211ENST00000552254 CCDC125Q86Z20 511 aa13.29□□□□□ -0.28
CDK4-211ENST00000552254 DCAF11Q8TEB1 546 aa13.29□□□□□ -0.28
CDK4-211ENST00000552254 LAMC1P11047 1609 aa13.28□□□□□ -0.28
CDK4-211ENST00000552254 STK26Q9P289 416 aa13.28□□□□□ -0.28
CDK4-211ENST00000552254 KDM2AQ9Y2K7 1162 aa13.28□□□□□ -0.28
CDK4-211ENST00000552254 PTCH1Q13635 1447 aa13.28□□□□□ -0.28
CDK4-211ENST00000552254 NEUROD1Q13562 356 aa13.27□□□□□ -0.29
CDK4-211ENST00000552254 TMEM132EQ6IEE7 984 aa13.27□□□□□ -0.29
CDK4-211ENST00000552254 STAC3Q96MF2 364 aa13.27□□□□□ -0.29
CDK4-211ENST00000552254 SF3B2Q13435 895 aaKnown RBP13.26□□□□□ -0.29
CDK4-211ENST00000552254 C14orf93Q9H972 538 aaKnown RBP13.26□□□□□ -0.29
CDK4-211ENST00000552254 C1orf167Q5SNV9 1468 aa13.25□□□□□ -0.29
CDK4-211ENST00000552254 ORAI2Q96SN7 254 aa13.25□□□□□ -0.29
CDK4-211ENST00000552254 CFAP70Q5T0N1 1121 aa13.24□□□□□ -0.29
CDK4-211ENST00000552254 WAPLQ7Z5K2 1190 aa13.24□□□□□ -0.29
CDK4-211ENST00000552254 L3MBTL2Q969R5 705 aa13.24□□□□□ -0.29
CDK4-211ENST00000552254 KNDC1Q76NI1 1749 aa13.24□□□□□ -0.29
CDK4-211ENST00000552254 ATRNO75882 1429 aa13.23□□□□□ -0.29
CDK4-211ENST00000552254 PLEKHH1Q9ULM0 1364 aa13.23□□□□□ -0.29
CDK4-211ENST00000552254 KIAA1210Q9ULL0 1709 aa13.23□□□□□ -0.29
CDK4-211ENST00000552254 PRAG1Q86YV5 1406 aa13.22□□□□□ -0.29
CDK4-211ENST00000552254 NUTM2FA1L443 756 aa13.22□□□□□ -0.29
CDK4-211ENST00000552254 BLMP54132 1417 aaPredicted RBP13.22□□□□□ -0.29
CDK4-211ENST00000552254 MARF1Q9Y4F3 1742 aaKnown RBP13.21□□□□□ -0.3
CDK4-211ENST00000552254 YTHDC2Q9H6S0 1430 aaKnown RBP13.21□□□□□ -0.3
CDK4-211ENST00000552254 LRPPRCP42704 1394 aaKnown RBP13.2□□□□□ -0.3
CDK4-211ENST00000552254 ADGRB1O14514 1584 aa13.2□□□□□ -0.3
CDK4-211ENST00000552254 TECPR2O15040 1411 aa13.2□□□□□ -0.3
CDK4-211ENST00000552254 ABCC11Q96J66 1382 aa13.2□□□□□ -0.3
CDK4-211ENST00000552254 CDC42BPGQ6DT37 1551 aa13.19□□□□□ -0.3
CDK4-211ENST00000552254 COL22A1Q8NFW1 1626 aaPredicted RBP13.18□□□□□ -0.3
CDK4-211ENST00000552254 RGPD8O14715 1765 aaPredicted RBP13.18□□□□□ -0.3
CDK4-211ENST00000552254 ESCO1Q5FWF5 840 aa13.18□□□□□ -0.3
CDK4-211ENST00000552254 DEFB132Q7Z7B7 95 aa13.18□□□□□ -0.3
CDK4-211ENST00000552254 FNBP4Q8N3X1 1017 aaPredicted RBP13.18□□□□□ -0.3
CDK4-211ENST00000552254 TRPM1Q7Z4N2 1603 aa13.17□□□□□ -0.3
CDK4-211ENST00000552254 CLSPNQ9HAW4 1339 aa13.17□□□□□ -0.3
CDK4-211ENST00000552254 XPCQ01831 940 aaPredicted RBP13.17□□□□□ -0.3
CDK4-211ENST00000552254 FMN2Q9NZ56 1722 aa13.16□□□□□ -0.3
CDK4-211ENST00000552254 SOS2Q07890 1332 aaPredicted RBP13.16□□□□□ -0.3
CDK4-211ENST00000552254 PSDA5PKW4 1024 aaPredicted RBP13.16□□□□□ -0.3
CDK4-211ENST00000552254 SAFB2Q14151 953 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDK4-211ENST00000552254 GJD4Q96KN9 370 aaPredicted RBP13.16□□□□□ -0.3
CDK4-211ENST00000552254 TONSLQ96HA7 1378 aa13.16□□□□□ -0.3
CDK4-211ENST00000552254 BRWD3Q6RI45 1802 aa13.16□□□□□ -0.3
CDK4-211ENST00000552254 DLC1Q96QB1 1528 aa13.15□□□□□ -0.3
CDK4-211ENST00000552254 FOXO3O43524 673 aa13.15□□□□□ -0.3
CDK4-211ENST00000552254 SIRT1Q96EB6 747 aa13.15□□□□□ -0.3
CDK4-211ENST00000552254 ARHGEF28Q8N1W1 1705 aaKnown RBP13.15□□□□□ -0.3
CDK4-211ENST00000552254 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.15□□□□□ -0.3
CDK4-211ENST00000552254 NBPF1Q3BBV0 1214 aa13.14□□□□□ -0.31
CDK4-211ENST00000552254 CCER1Q8TC90 406 aaPredicted RBP13.14□□□□□ -0.31
CDK4-211ENST00000552254 NBPF8Q3BBV2 869 aa13.13□□□□□ -0.31
CDK4-211ENST00000552254 PRAM1Q96QH2 718 aa13.13□□□□□ -0.31
CDK4-211ENST00000552254 BCL9LQ86UU0 1499 aa13.12□□□□□ -0.31
CDK4-211ENST00000552254 A0A0G2JS52 829 aa13.12□□□□□ -0.31
CDK4-211ENST00000552254 MYT1Q01538 1121 aa13.12□□□□□ -0.31
CDK4-211ENST00000552254 TRAK1Q9UPV9 953 aa13.12□□□□□ -0.31
CDK4-211ENST00000552254 NPHP3Q7Z494 1330 aa13.12□□□□□ -0.31
CDK4-211ENST00000552254 GLI3P10071 1580 aa13.11□□□□□ -0.31
CDK4-211ENST00000552254 RALGAPBQ86X10 1494 aa13.11□□□□□ -0.31
CDK4-211ENST00000552254 PXDNQ92626 1479 aa13.11□□□□□ -0.31
CDK4-211ENST00000552254 BAG6P46379 1132 aa13.11□□□□□ -0.31
CDK4-211ENST00000552254 CCDC9Q9Y3X0 531 aaKnown RBP13.11□□□□□ -0.31
CDK4-211ENST00000552254 HAP1P54257 671 aaPredicted RBP13.1□□□□□ -0.31
CDK4-211ENST00000552254 POGKQ9P215 609 aa13.1□□□□□ -0.31
CDK4-211ENST00000552254 SLC34A2O95436 690 aa13.09□□□□□ -0.31
CDK4-211ENST00000552254 C1QTNF8P60827 252 aa13.09□□□□□ -0.31
CDK4-211ENST00000552254 HIRIP3Q9BW71 556 aaPredicted RBP13.09□□□□□ -0.31
CDK4-211ENST00000552254 UTRNP46939 3433 aa13.09□□□□□ -0.31
CDK4-211ENST00000552254 USP32Q8NFA0 1604 aa13.09□□□□□ -0.31
CDK4-211ENST00000552254 KIF1AQ12756 1690 aa13.08□□□□□ -0.31
CDK4-211ENST00000552254 PLEKHG5O94827 1062 aa13.08□□□□□ -0.32
CDK4-211ENST00000552254 UNC5CLQ8IV45 518 aa13.08□□□□□ -0.32
CDK4-211ENST00000552254 TIMELESSQ9UNS1 1208 aa13.08□□□□□ -0.32
CDK4-211ENST00000552254 ADGRB2O60241 1585 aa13.07□□□□□ -0.32
CDK4-211ENST00000552254 SEPT12Q8IYM1 358 aa13.07□□□□□ -0.32
CDK4-211ENST00000552254 MINK1Q8N4C8 1332 aaPredicted RBP13.07□□□□□ -0.32
CDK4-211ENST00000552254 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
CDK4-211ENST00000552254 KRT28Q7Z3Y7 464 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms