RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 E9PCH4 1651 aa19.69■□□□□ 0.74
SNRPF-204ENST00000552085 SEPT12Q8IYM1 358 aa19.69■□□□□ 0.74
SNRPF-204ENST00000552085 SLIT2O94813 1529 aa19.68■□□□□ 0.74
SNRPF-204ENST00000552085 IQGAP3Q86VI3 1631 aa19.68■□□□□ 0.74
SNRPF-204ENST00000552085 KANK4Q5T7N3 995 aaPredicted RBP19.67■□□□□ 0.74
SNRPF-204ENST00000552085 R3HDM1Q15032 1099 aaKnown RBP19.66■□□□□ 0.74
SNRPF-204ENST00000552085 KRT27Q7Z3Y8 459 aa19.65■□□□□ 0.74
SNRPF-204ENST00000552085 RGPD1P0DJD0 1748 aa19.65■□□□□ 0.74
SNRPF-204ENST00000552085 PXDNQ92626 1479 aa19.63■□□□□ 0.73
SNRPF-204ENST00000552085 NPHP3Q7Z494 1330 aa19.62■□□□□ 0.73
SNRPF-204ENST00000552085 ADGRL2O95490 1459 aa19.61■□□□□ 0.73
SNRPF-204ENST00000552085 ANKRD50Q9ULJ7 1429 aa19.6■□□□□ 0.73
SNRPF-204ENST00000552085 ONECUT3O60422 494 aaPredicted RBP19.6■□□□□ 0.73
SNRPF-204ENST00000552085 EN1Q05925 392 aaPredicted RBP19.6■□□□□ 0.73
SNRPF-204ENST00000552085 USP32Q8NFA0 1604 aa19.58■□□□□ 0.73
SNRPF-204ENST00000552085 VPS72Q15906 364 aa19.58■□□□□ 0.72
SNRPF-204ENST00000552085 NWD2Q9ULI1 1742 aa19.58■□□□□ 0.72
SNRPF-204ENST00000552085 PLCH1Q4KWH8 1693 aa19.57■□□□□ 0.72
SNRPF-204ENST00000552085 VPS8Q8N3P4 1428 aa19.57■□□□□ 0.72
SNRPF-204ENST00000552085 TNS1Q9HBL0 1735 aaKnown RBP19.56■□□□□ 0.72
SNRPF-204ENST00000552085 XPCQ01831 940 aaPredicted RBP19.55■□□□□ 0.72
SNRPF-204ENST00000552085 DCAF8L1A6NGE4 600 aa19.54■□□□□ 0.72
SNRPF-204ENST00000552085 ESCO1Q5FWF5 840 aa19.54■□□□□ 0.72
SNRPF-204ENST00000552085 CCDC9Q9Y3X0 531 aaKnown RBP19.54■□□□□ 0.72
SNRPF-204ENST00000552085 DISP2A7MBM2 1401 aa19.53■□□□□ 0.72
SNRPF-204ENST00000552085 FOXO3O43524 673 aa19.53■□□□□ 0.72
SNRPF-204ENST00000552085 ROBO2Q9HCK4 1378 aa19.53■□□□□ 0.72
SNRPF-204ENST00000552085 SENP3-EIF4A1A0A087X0R7 540 aa19.52■□□□□ 0.72
SNRPF-204ENST00000552085 ZNF326Q5BKZ1 582 aaKnown RBP19.51■□□□□ 0.71
SNRPF-204ENST00000552085 LRPPRCP42704 1394 aaKnown RBP19.51■□□□□ 0.71
SNRPF-204ENST00000552085 CDC42BPGQ6DT37 1551 aa19.5■□□□□ 0.71
SNRPF-204ENST00000552085 A0A0G2JS52 829 aa19.5■□□□□ 0.71
SNRPF-204ENST00000552085 MYT1Q01538 1121 aa19.5■□□□□ 0.71
SNRPF-204ENST00000552085 NEXMIFQ5QGS0 1516 aa19.49■□□□□ 0.71
SNRPF-204ENST00000552085 EZH2Q15910 746 aaKnown RBP19.48■□□□□ 0.71
SNRPF-204ENST00000552085 HFM1A2PYH4 1435 aa19.47■□□□□ 0.71
SNRPF-204ENST00000552085 PRAG1Q86YV5 1406 aa19.47■□□□□ 0.71
SNRPF-204ENST00000552085 SPATA31A3Q5VYP0 1347 aa19.47■□□□□ 0.71
SNRPF-204ENST00000552085 CAMTA1Q9Y6Y1 1673 aa19.46■□□□□ 0.71
SNRPF-204ENST00000552085 ADGRB2O60241 1585 aa19.45■□□□□ 0.7
SNRPF-204ENST00000552085 ZNF784Q8NCA9 323 aaPredicted RBP19.45■□□□□ 0.7
SNRPF-204ENST00000552085 ABCA3Q99758 1704 aa19.45■□□□□ 0.7
SNRPF-204ENST00000552085 NINLQ9Y2I6 1382 aa19.44■□□□□ 0.7
SNRPF-204ENST00000552085 HAP1P54257 671 aaPredicted RBP19.44■□□□□ 0.7
SNRPF-204ENST00000552085 PPP1R1BQ9UD71 204 aaPredicted RBP19.44■□□□□ 0.7
SNRPF-204ENST00000552085 NRAPQ86VF7 1730 aa19.44■□□□□ 0.7
SNRPF-204ENST00000552085 FAM98CQ17RN3 349 aaKnown RBP19.43■□□□□ 0.7
SNRPF-204ENST00000552085 FAM182BQ5T319 152 aa19.43■□□□□ 0.7
SNRPF-204ENST00000552085 RREB1Q92766 1687 aa19.43■□□□□ 0.7
SNRPF-204ENST00000552085 CAMKK2Q96RR4 588 aa19.42■□□□□ 0.7
SNRPF-204ENST00000552085 KIF1AQ12756 1690 aa19.42■□□□□ 0.7
SNRPF-204ENST00000552085 NUP188Q5SRE5 1749 aa19.42■□□□□ 0.7
SNRPF-204ENST00000552085 C1QTNF8P60827 252 aa19.4■□□□□ 0.7
SNRPF-204ENST00000552085 CCDC144AA2RUR9 1427 aa19.4■□□□□ 0.7
SNRPF-204ENST00000552085 KIF1BO60333 1816 aa19.39■□□□□ 0.7
SNRPF-204ENST00000552085 SPON1Q9HCB6 807 aa19.39■□□□□ 0.69
SNRPF-204ENST00000552085 PARD3Q8TEW0 1356 aa19.39■□□□□ 0.69
SNRPF-204ENST00000552085 CABLES1Q8TDN4 633 aa19.38■□□□□ 0.69
SNRPF-204ENST00000552085 CHD4Q14839 1912 aa19.37■□□□□ 0.69
SNRPF-204ENST00000552085 THSD7AQ9UPZ6 1657 aa19.36■□□□□ 0.69
SNRPF-204ENST00000552085 CLTCL1P53675 1640 aa19.36■□□□□ 0.69
SNRPF-204ENST00000552085 NAIPQ13075 1403 aa19.36■□□□□ 0.69
SNRPF-204ENST00000552085 NUTM2FA1L443 756 aa19.36■□□□□ 0.69
SNRPF-204ENST00000552085 KRT28Q7Z3Y7 464 aa19.36■□□□□ 0.69
SNRPF-204ENST00000552085 TNS3Q68CZ2 1445 aa19.35■□□□□ 0.69
SNRPF-204ENST00000552085 NUP155O75694 1391 aa19.35■□□□□ 0.69
SNRPF-204ENST00000552085 FAM83GA6ND36 823 aa19.35■□□□□ 0.69
SNRPF-204ENST00000552085 KCNQ2O43526 872 aa19.35■□□□□ 0.69
SNRPF-204ENST00000552085 FMN2Q9NZ56 1722 aa19.34■□□□□ 0.69
SNRPF-204ENST00000552085 PLEKHG5O94827 1062 aa19.34■□□□□ 0.69
SNRPF-204ENST00000552085 NBPF8Q3BBV2 869 aa19.34■□□□□ 0.69
SNRPF-204ENST00000552085 NBPF14Q5TI25 921 aa19.34■□□□□ 0.69
SNRPF-204ENST00000552085 TRIM37O94972 964 aa19.33■□□□□ 0.68
SNRPF-204ENST00000552085 FAM50AQ14320 339 aaKnown RBP19.33■□□□□ 0.68
SNRPF-204ENST00000552085 APBA3O96018 575 aa19.32■□□□□ 0.68
SNRPF-204ENST00000552085 RGPD8O14715 1765 aaPredicted RBP19.32■□□□□ 0.68
SNRPF-204ENST00000552085 VGFO15240 615 aaPredicted RBP19.31■□□□□ 0.68
SNRPF-204ENST00000552085 COL14A1Q05707 1796 aaKnown RBP19.31■□□□□ 0.68
SNRPF-204ENST00000552085 FAM196AQ6ZSG2 479 aa19.3■□□□□ 0.68
SNRPF-204ENST00000552085 BTG4Q9NY30 223 aa19.3■□□□□ 0.68
SNRPF-204ENST00000552085 PSME1Q06323 249 aa19.29■□□□□ 0.68
SNRPF-204ENST00000552085 SPATA31A5Q5VU36 1347 aa19.28■□□□□ 0.68
SNRPF-204ENST00000552085 SPATA31A7Q8IWB4 1347 aa19.28■□□□□ 0.68
SNRPF-204ENST00000552085 ARHGEF10O15013 1369 aa19.28■□□□□ 0.68
SNRPF-204ENST00000552085 APLP2Q06481 763 aa19.27■□□□□ 0.68
SNRPF-204ENST00000552085 SBNO1A3KN83 1393 aa19.27■□□□□ 0.68
SNRPF-204ENST00000552085 LMOD2Q6P5Q4 547 aa19.26■□□□□ 0.67
SNRPF-204ENST00000552085 PPLO60437 1756 aa19.25■□□□□ 0.67
SNRPF-204ENST00000552085 NRKQ7Z2Y5 1582 aa19.25■□□□□ 0.67
SNRPF-204ENST00000552085 IFT172Q9UG01 1749 aa19.24■□□□□ 0.67
SNRPF-204ENST00000552085 ROCK1Q13464 1354 aa19.23■□□□□ 0.67
SNRPF-204ENST00000552085 WAPLQ7Z5K2 1190 aa19.23■□□□□ 0.67
SNRPF-204ENST00000552085 CASZ1Q86V15 1759 aa19.22■□□□□ 0.67
SNRPF-204ENST00000552085 PHF8Q9UPP1 1060 aa19.22■□□□□ 0.67
SNRPF-204ENST00000552085 RRBP1Q9P2E9 1410 aaKnown RBP19.22■□□□□ 0.67
SNRPF-204ENST00000552085 MYOM1P52179 1685 aa19.21■□□□□ 0.67
SNRPF-204ENST00000552085 KNDC1Q76NI1 1749 aa19.21■□□□□ 0.67
SNRPF-204ENST00000552085 TECPR2O15040 1411 aa19.2■□□□□ 0.66
SNRPF-204ENST00000552085 NRXN1Q9ULB1 1477 aa19.19■□□□□ 0.66
SNRPF-204ENST00000552085 RPGRIP1LQ68CZ1 1315 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms