RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 HDGFP51858 240 aaKnown RBP10.44□□□□□ -0.74
PRPF40B-214ENST00000551320 NRXN3Q9Y4C0 1643 aa10.44□□□□□ -0.74
PRPF40B-214ENST00000551320 ROCK1Q13464 1354 aa10.43□□□□□ -0.74
PRPF40B-214ENST00000551320 CADPS2Q86UW7 1296 aa10.43□□□□□ -0.74
PRPF40B-214ENST00000551320 KLHL34Q8N239 644 aa10.43□□□□□ -0.74
PRPF40B-214ENST00000551320 SRCAPQ6ZRS2 3230 aa10.41□□□□□ -0.74
PRPF40B-214ENST00000551320 CLTCL1P53675 1640 aa10.41□□□□□ -0.74
PRPF40B-214ENST00000551320 ADAMTS2O95450 1211 aa10.41□□□□□ -0.74
PRPF40B-214ENST00000551320 C8orf37Q96NL8 207 aa10.41□□□□□ -0.74
PRPF40B-214ENST00000551320 ORAI2Q96SN7 254 aa10.41□□□□□ -0.74
PRPF40B-214ENST00000551320 TRPM2O94759 1503 aa10.41□□□□□ -0.74
PRPF40B-214ENST00000551320 MST1RQ04912 1400 aa10.41□□□□□ -0.74
PRPF40B-214ENST00000551320 AFF2P51816 1311 aa10.4□□□□□ -0.74
PRPF40B-214ENST00000551320 NUTM2FA1L443 756 aa10.4□□□□□ -0.74
PRPF40B-214ENST00000551320 PLEKHG5O94827 1062 aa10.4□□□□□ -0.74
PRPF40B-214ENST00000551320 XPCQ01831 940 aaPredicted RBP10.4□□□□□ -0.74
PRPF40B-214ENST00000551320 UPF1Q92900 1129 aaKnown RBP eCLIP10.4□□□□□ -0.74
PRPF40B-214ENST00000551320 DIP2AQ14689 1571 aa10.39□□□□□ -0.75
PRPF40B-214ENST00000551320 ASXL1Q8IXJ9 1541 aa10.39□□□□□ -0.75
PRPF40B-214ENST00000551320 SPHKAPQ2M3C7 1700 aa10.39□□□□□ -0.75
PRPF40B-214ENST00000551320 AHDC1Q5TGY3 1603 aaPredicted RBP10.39□□□□□ -0.75
PRPF40B-214ENST00000551320 XRN1Q8IZH2 1706 aaKnown RBP10.38□□□□□ -0.75
PRPF40B-214ENST00000551320 SPATA31A6Q5VVP1 1343 aa10.38□□□□□ -0.75
PRPF40B-214ENST00000551320 PITPNM1O00562 1244 aa10.38□□□□□ -0.75
PRPF40B-214ENST00000551320 ROBO2Q9HCK4 1378 aa10.38□□□□□ -0.75
PRPF40B-214ENST00000551320 NEXMIFQ5QGS0 1516 aa10.38□□□□□ -0.75
PRPF40B-214ENST00000551320 PRR29P0C7W0 189 aa10.37□□□□□ -0.75
PRPF40B-214ENST00000551320 RXRBP28702 533 aa10.37□□□□□ -0.75
PRPF40B-214ENST00000551320 NAIPQ13075 1403 aa10.37□□□□□ -0.75
PRPF40B-214ENST00000551320 STK26Q9P289 416 aa10.37□□□□□ -0.75
PRPF40B-214ENST00000551320 PIK3R4Q99570 1358 aa10.37□□□□□ -0.75
PRPF40B-214ENST00000551320 NALCNQ8IZF0 1738 aa10.36□□□□□ -0.75
PRPF40B-214ENST00000551320 SETBP1Q9Y6X0 1596 aa10.36□□□□□ -0.75
PRPF40B-214ENST00000551320 RGL3Q3MIN7 710 aa10.36□□□□□ -0.75
PRPF40B-214ENST00000551320 ZNF772Q68DY9 489 aaPredicted RBP10.36□□□□□ -0.75
PRPF40B-214ENST00000551320 QTRT2Q9H974 415 aaKnown RBP10.36□□□□□ -0.75
PRPF40B-214ENST00000551320 SHPRHQ149N8 1683 aa10.36□□□□□ -0.75
PRPF40B-214ENST00000551320 NCOA3Q9Y6Q9 1424 aa10.35□□□□□ -0.75
PRPF40B-214ENST00000551320 SPOCK2Q92563 424 aa10.35□□□□□ -0.75
PRPF40B-214ENST00000551320 PNPLA6Q8IY17 1366 aa10.35□□□□□ -0.75
PRPF40B-214ENST00000551320 ADGRL3Q9HAR2 1447 aa10.34□□□□□ -0.75
PRPF40B-214ENST00000551320 TMEM132EQ6IEE7 984 aa10.34□□□□□ -0.75
PRPF40B-214ENST00000551320 WAPLQ7Z5K2 1190 aa10.34□□□□□ -0.75
PRPF40B-214ENST00000551320 NGLY1Q96IV0 654 aa10.34□□□□□ -0.75
PRPF40B-214ENST00000551320 C1orf167Q5SNV9 1468 aa10.34□□□□□ -0.75
PRPF40B-214ENST00000551320 ADGRF5Q8IZF2 1346 aa10.33□□□□□ -0.76
PRPF40B-214ENST00000551320 LRRC59Q96AG4 307 aaKnown RBP10.33□□□□□ -0.76
PRPF40B-214ENST00000551320 NHSL1Q5SYE7 1610 aa10.33□□□□□ -0.76
PRPF40B-214ENST00000551320 RGS12O14924 1447 aa10.33□□□□□ -0.76
PRPF40B-214ENST00000551320 SETD5Q9C0A6 1442 aa10.33□□□□□ -0.76
PRPF40B-214ENST00000551320 PLEKHH1Q9ULM0 1364 aa10.31□□□□□ -0.76
PRPF40B-214ENST00000551320 ESCO1Q5FWF5 840 aa10.31□□□□□ -0.76
PRPF40B-214ENST00000551320 ZBTB47Q9UFB7 747 aaPredicted RBP10.31□□□□□ -0.76
PRPF40B-214ENST00000551320 RRBP1Q9P2E9 1410 aaKnown RBP10.31□□□□□ -0.76
PRPF40B-214ENST00000551320 KIF1BO60333 1816 aa10.3□□□□□ -0.76
PRPF40B-214ENST00000551320 FOXO3O43524 673 aa10.3□□□□□ -0.76
PRPF40B-214ENST00000551320 DCCP43146 1447 aa10.3□□□□□ -0.76
PRPF40B-214ENST00000551320 EP400Q96L91 3159 aa10.29□□□□□ -0.76
PRPF40B-214ENST00000551320 VGFO15240 615 aaPredicted RBP10.29□□□□□ -0.76
PRPF40B-214ENST00000551320 SAFB2Q14151 953 aaKnown RBP eCLIP10.29□□□□□ -0.76
PRPF40B-214ENST00000551320 USP21Q9UK80 565 aa10.29□□□□□ -0.76
PRPF40B-214ENST00000551320 RBM6P78332 1123 aaKnown RBP10.28□□□□□ -0.76
PRPF40B-214ENST00000551320 CREBZFQ9NS37 354 aa10.28□□□□□ -0.76
PRPF40B-214ENST00000551320 SOS2Q07890 1332 aaPredicted RBP10.28□□□□□ -0.76
PRPF40B-214ENST00000551320 CABLES1Q8TDN4 633 aa10.27□□□□□ -0.77
PRPF40B-214ENST00000551320 PPLO60437 1756 aa10.26□□□□□ -0.77
PRPF40B-214ENST00000551320 HFM1A2PYH4 1435 aa10.25□□□□□ -0.77
PRPF40B-214ENST00000551320 MPHOSPH9Q99550 1183 aa10.25□□□□□ -0.77
PRPF40B-214ENST00000551320 PTCH1Q13635 1447 aa10.24□□□□□ -0.77
PRPF40B-214ENST00000551320 CFAP70Q5T0N1 1121 aa10.23□□□□□ -0.77
PRPF40B-214ENST00000551320 LMOD2Q6P5Q4 547 aa10.23□□□□□ -0.77
PRPF40B-214ENST00000551320 PXDNQ92626 1479 aa10.23□□□□□ -0.77
PRPF40B-214ENST00000551320 TRPC5Q9UL62 973 aaPredicted RBP10.22□□□□□ -0.77
PRPF40B-214ENST00000551320 RPGRIP1LQ68CZ1 1315 aa10.22□□□□□ -0.77
PRPF40B-214ENST00000551320 SPATA31E1Q6ZUB1 1445 aa10.22□□□□□ -0.77
PRPF40B-214ENST00000551320 BCL9LQ86UU0 1499 aa10.22□□□□□ -0.77
PRPF40B-214ENST00000551320 CDK12Q9NYV4 1490 aaPredicted RBP10.22□□□□□ -0.77
PRPF40B-214ENST00000551320 MNX1P50219 401 aaPredicted RBP10.21□□□□□ -0.77
PRPF40B-214ENST00000551320 KRT28Q7Z3Y7 464 aa10.21□□□□□ -0.77
PRPF40B-214ENST00000551320 FNBP4Q8N3X1 1017 aaPredicted RBP10.21□□□□□ -0.77
PRPF40B-214ENST00000551320 PMFBP1Q8TBY8 1022 aa10.21□□□□□ -0.77
PRPF40B-214ENST00000551320 HIRIP3Q9BW71 556 aaPredicted RBP10.21□□□□□ -0.77
PRPF40B-214ENST00000551320 CCDC144AA2RUR9 1427 aa10.21□□□□□ -0.78
PRPF40B-214ENST00000551320 ATRNO75882 1429 aa10.21□□□□□ -0.78
PRPF40B-214ENST00000551320 MYOM2P54296 1465 aa10.21□□□□□ -0.78
PRPF40B-214ENST00000551320 LRPPRCP42704 1394 aaKnown RBP10.2□□□□□ -0.78
PRPF40B-214ENST00000551320 NPHP3Q7Z494 1330 aa10.2□□□□□ -0.78
PRPF40B-214ENST00000551320 RGPD8O14715 1765 aaPredicted RBP10.19□□□□□ -0.78
PRPF40B-214ENST00000551320 LAMC1P11047 1609 aa10.19□□□□□ -0.78
PRPF40B-214ENST00000551320 FAM182BQ5T319 152 aa10.19□□□□□ -0.78
PRPF40B-214ENST00000551320 DEFB132Q7Z7B7 95 aa10.19□□□□□ -0.78
PRPF40B-214ENST00000551320 PRAM1Q96QH2 718 aa10.19□□□□□ -0.78
PRPF40B-214ENST00000551320 KDM2AQ9Y2K7 1162 aa10.19□□□□□ -0.78
PRPF40B-214ENST00000551320 YTHDC2Q9H6S0 1430 aaKnown RBP10.18□□□□□ -0.78
PRPF40B-214ENST00000551320 CHADLQ6NUI6 762 aa10.18□□□□□ -0.78
PRPF40B-214ENST00000551320 GJD4Q96KN9 370 aaPredicted RBP10.18□□□□□ -0.78
PRPF40B-214ENST00000551320 CDC42BPGQ6DT37 1551 aa10.18□□□□□ -0.78
PRPF40B-214ENST00000551320 ATAD2Q6PL18 1390 aa10.17□□□□□ -0.78
PRPF40B-214ENST00000551320 SPATA31A3Q5VYP0 1347 aa10.17□□□□□ -0.78
PRPF40B-214ENST00000551320 NUBP1P53384 320 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms