RNA–Protein interactions for RNA: ENST00000551316.1

SNRPF-203, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-203ENST00000551316 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.62■■□□□ 1.05
SNRPF-203ENST00000551316 KANK4Q5T7N3 995 aaPredicted RBP21.61■■□□□ 1.05
SNRPF-203ENST00000551316 USP32Q8NFA0 1604 aa21.61■■□□□ 1.05
SNRPF-203ENST00000551316 IFFO2Q5TF58 517 aa21.6■■□□□ 1.05
SNRPF-203ENST00000551316 HDGFP51858 240 aaKnown RBP21.58■■□□□ 1.05
SNRPF-203ENST00000551316 R3HDM1Q15032 1099 aaKnown RBP21.58■■□□□ 1.05
SNRPF-203ENST00000551316 CHIC2Q9UKJ5 165 aa21.58■■□□□ 1.05
SNRPF-203ENST00000551316 ABCA3Q99758 1704 aa21.58■■□□□ 1.04
SNRPF-203ENST00000551316 SF3B2Q13435 895 aaKnown RBP21.57■■□□□ 1.04
SNRPF-203ENST00000551316 SEPT12Q8IYM1 358 aa21.56■■□□□ 1.04
SNRPF-203ENST00000551316 UTRNP46939 3433 aa21.54■■□□□ 1.04
SNRPF-203ENST00000551316 ANKRD30AQ9BXX3 1397 aa21.53■■□□□ 1.04
SNRPF-203ENST00000551316 NWD2Q9ULI1 1742 aa21.53■■□□□ 1.04
SNRPF-203ENST00000551316 ADGRL2O95490 1459 aa21.52■■□□□ 1.04
SNRPF-203ENST00000551316 XPCQ01831 940 aaPredicted RBP21.52■■□□□ 1.04
SNRPF-203ENST00000551316 UNC5CLQ8IV45 518 aa21.52■■□□□ 1.04
SNRPF-203ENST00000551316 NRAPQ86VF7 1730 aa21.52■■□□□ 1.03
SNRPF-203ENST00000551316 EN1Q05925 392 aaPredicted RBP21.51■■□□□ 1.03
SNRPF-203ENST00000551316 RREB1Q92766 1687 aa21.5■■□□□ 1.03
SNRPF-203ENST00000551316 NUP188Q5SRE5 1749 aa21.49■■□□□ 1.03
SNRPF-203ENST00000551316 NEXMIFQ5QGS0 1516 aa21.49■■□□□ 1.03
SNRPF-203ENST00000551316 ROBO2Q9HCK4 1378 aa21.48■■□□□ 1.03
SNRPF-203ENST00000551316 BAG6P46379 1132 aa21.48■■□□□ 1.03
SNRPF-203ENST00000551316 CDC42BPGQ6DT37 1551 aa21.46■■□□□ 1.03
SNRPF-203ENST00000551316 KRT27Q7Z3Y8 459 aa21.46■■□□□ 1.03
SNRPF-203ENST00000551316 CEP350Q5VT06 3117 aa21.46■■□□□ 1.03
SNRPF-203ENST00000551316 ANKRD50Q9ULJ7 1429 aa21.45■■□□□ 1.02
SNRPF-203ENST00000551316 DISP2A7MBM2 1401 aa21.44■■□□□ 1.02
SNRPF-203ENST00000551316 FAM182BQ5T319 152 aa21.43■■□□□ 1.02
SNRPF-203ENST00000551316 VPS8Q8N3P4 1428 aa21.43■■□□□ 1.02
SNRPF-203ENST00000551316 SENP3-EIF4A1A0A087X0R7 540 aa21.42■■□□□ 1.02
SNRPF-203ENST00000551316 ONECUT3O60422 494 aaPredicted RBP21.4■■□□□ 1.02
SNRPF-203ENST00000551316 THSD7AQ9UPZ6 1657 aa21.4■■□□□ 1.02
SNRPF-203ENST00000551316 NPHP3Q7Z494 1330 aa21.39■■□□□ 1.01
SNRPF-203ENST00000551316 VPS72Q15906 364 aa21.39■■□□□ 1.01
SNRPF-203ENST00000551316 EZH2Q15910 746 aaKnown RBP21.39■■□□□ 1.01
SNRPF-203ENST00000551316 CLTCL1P53675 1640 aa21.38■■□□□ 1.01
SNRPF-203ENST00000551316 PRAG1Q86YV5 1406 aa21.38■■□□□ 1.01
SNRPF-203ENST00000551316 ADGRB2O60241 1585 aa21.36■■□□□ 1.01
SNRPF-203ENST00000551316 FOXO3O43524 673 aa21.36■■□□□ 1.01
SNRPF-203ENST00000551316 ZNF784Q8NCA9 323 aaPredicted RBP21.35■■□□□ 1.01
SNRPF-203ENST00000551316 RGPD8O14715 1765 aaPredicted RBP21.35■■□□□ 1.01
SNRPF-203ENST00000551316 ESCO1Q5FWF5 840 aa21.34■■□□□ 1.01
SNRPF-203ENST00000551316 FMN2Q9NZ56 1722 aa21.34■■□□□ 1.01
SNRPF-203ENST00000551316 KIF1AQ12756 1690 aa21.33■■□□□ 1
SNRPF-203ENST00000551316 CCDC9Q9Y3X0 531 aaKnown RBP21.32■■□□□ 1
SNRPF-203ENST00000551316 SPATA31A3Q5VYP0 1347 aa21.3■■□□□ 1
SNRPF-203ENST00000551316 A0A0G2JS52 829 aa21.3■■□□□ 1
SNRPF-203ENST00000551316 MYT1Q01538 1121 aa21.3■■□□□ 1
SNRPF-203ENST00000551316 FAM98CQ17RN3 349 aaKnown RBP21.3■■□□□ 1
SNRPF-203ENST00000551316 CABLES1Q8TDN4 633 aa21.3■■□□□ 1
SNRPF-203ENST00000551316 NRKQ7Z2Y5 1582 aa21.3■■□□□ 1
SNRPF-203ENST00000551316 MYOM1P52179 1685 aa21.29■■□□□ 1
SNRPF-203ENST00000551316 CAMKK2Q96RR4 588 aa21.29■■□□□ 1
SNRPF-203ENST00000551316 PLEKHG5O94827 1062 aa21.28■■□□□ 1
SNRPF-203ENST00000551316 CHD4Q14839 1912 aa21.27■■□□□ 1
SNRPF-203ENST00000551316 NINLQ9Y2I6 1382 aa21.27■■□□□ 1
SNRPF-203ENST00000551316 NUTM2FA1L443 756 aa21.27■■□□□ 1
SNRPF-203ENST00000551316 CASZ1Q86V15 1759 aa21.27■■□□□ 1
SNRPF-203ENST00000551316 HFM1A2PYH4 1435 aa21.27■■□□□ 1
SNRPF-203ENST00000551316 KIF1BO60333 1816 aa21.27■□□□□ 0.99
SNRPF-203ENST00000551316 ZNF326Q5BKZ1 582 aaKnown RBP21.26■□□□□ 0.99
SNRPF-203ENST00000551316 NAIPQ13075 1403 aa21.26■□□□□ 0.99
SNRPF-203ENST00000551316 TNS3Q68CZ2 1445 aa21.25■□□□□ 0.99
SNRPF-203ENST00000551316 IFT172Q9UG01 1749 aa21.25■□□□□ 0.99
SNRPF-203ENST00000551316 C1QTNF8P60827 252 aa21.24■□□□□ 0.99
SNRPF-203ENST00000551316 CRYBG1Q9Y4K1 1723 aa21.24■□□□□ 0.99
SNRPF-203ENST00000551316 PPLO60437 1756 aa21.22■□□□□ 0.99
SNRPF-203ENST00000551316 CCDC144AA2RUR9 1427 aa21.21■□□□□ 0.99
SNRPF-203ENST00000551316 COL14A1Q05707 1796 aaKnown RBP21.21■□□□□ 0.99
SNRPF-203ENST00000551316 FAM83GA6ND36 823 aa21.18■□□□□ 0.98
SNRPF-203ENST00000551316 TRIM37O94972 964 aa21.18■□□□□ 0.98
SNRPF-203ENST00000551316 PPP1R1BQ9UD71 204 aaPredicted RBP21.18■□□□□ 0.98
SNRPF-203ENST00000551316 TRPM3Q9HCF6 1732 aaPredicted RBP21.18■□□□□ 0.98
SNRPF-203ENST00000551316 LRPPRCP42704 1394 aaKnown RBP21.17■□□□□ 0.98
SNRPF-203ENST00000551316 KNDC1Q76NI1 1749 aa21.17■□□□□ 0.98
SNRPF-203ENST00000551316 PLEKHH1Q9ULM0 1364 aa21.15■□□□□ 0.98
SNRPF-203ENST00000551316 ALS2Q96Q42 1657 aa21.15■□□□□ 0.98
SNRPF-203ENST00000551316 NUP155O75694 1391 aa21.14■□□□□ 0.98
SNRPF-203ENST00000551316 PARD3Q8TEW0 1356 aa21.14■□□□□ 0.98
SNRPF-203ENST00000551316 SPON1Q9HCB6 807 aa21.14■□□□□ 0.97
SNRPF-203ENST00000551316 KCNQ2O43526 872 aa21.13■□□□□ 0.97
SNRPF-203ENST00000551316 HAP1P54257 671 aaPredicted RBP21.13■□□□□ 0.97
SNRPF-203ENST00000551316 KRT28Q7Z3Y7 464 aa21.13■□□□□ 0.97
SNRPF-203ENST00000551316 SPATA31A5Q5VU36 1347 aa21.11■□□□□ 0.97
SNRPF-203ENST00000551316 SPATA31A7Q8IWB4 1347 aa21.11■□□□□ 0.97
SNRPF-203ENST00000551316 APBA3O96018 575 aa21.11■□□□□ 0.97
SNRPF-203ENST00000551316 BTG4Q9NY30 223 aa21.11■□□□□ 0.97
SNRPF-203ENST00000551316 WAPLQ7Z5K2 1190 aa21.08■□□□□ 0.97
SNRPF-203ENST00000551316 PDGFDQ9GZP0 370 aaPredicted RBP21.08■□□□□ 0.97
SNRPF-203ENST00000551316 GOLGB1Q14789 3259 aaKnown RBP21.08■□□□□ 0.96
SNRPF-203ENST00000551316 NRXN1Q9ULB1 1477 aa21.07■□□□□ 0.96
SNRPF-203ENST00000551316 TECPR2O15040 1411 aa21.07■□□□□ 0.96
SNRPF-203ENST00000551316 DCAF8L1A6NGE4 600 aa21.07■□□□□ 0.96
SNRPF-203ENST00000551316 FAM50AQ14320 339 aaKnown RBP21.07■□□□□ 0.96
SNRPF-203ENST00000551316 RGPD3A6NKT7 1758 aaPredicted RBP21.07■□□□□ 0.96
SNRPF-203ENST00000551316 RGPD4Q7Z3J3 1758 aa21.07■□□□□ 0.96
SNRPF-203ENST00000551316 SHANK3Q9BYB0 1731 aa21.07■□□□□ 0.96
SNRPF-203ENST00000551316 RRBP1Q9P2E9 1410 aaKnown RBP21.04■□□□□ 0.96
SNRPF-203ENST00000551316 ANO8Q9HCE9 1232 aaPredicted RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms