RNA–Protein interactions for RNA: ENST00000551301.1

SLC48A1-208, Transcript of solute carrier family 48 member 1, humanhuman

TSL 2

Gene SLC48A1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-208ENST00000551301 YTHDC2Q9H6S0 1430 aaKnown RBP29.74■■■□□ 2.35
SLC48A1-208ENST00000551301 ZNF772Q68DY9 489 aaPredicted RBP29.74■■■□□ 2.35
SLC48A1-208ENST00000551301 CDC42BPGQ6DT37 1551 aa29.73■■■□□ 2.35
SLC48A1-208ENST00000551301 WAPLQ7Z5K2 1190 aa29.73■■■□□ 2.35
SLC48A1-208ENST00000551301 DDX17Q92841 729 aaKnown RBP29.73■■■□□ 2.35
SLC48A1-208ENST00000551301 ORAI2Q96SN7 254 aa29.73■■■□□ 2.35
SLC48A1-208ENST00000551301 LRP6O75581 1613 aa29.73■■■□□ 2.35
SLC48A1-208ENST00000551301 LAMC1P11047 1609 aa29.73■■■□□ 2.35
SLC48A1-208ENST00000551301 KNDC1Q76NI1 1749 aa29.71■■■□□ 2.35
SLC48A1-208ENST00000551301 ESCO1Q5FWF5 840 aa29.71■■■□□ 2.35
SLC48A1-208ENST00000551301 SIRT1Q96EB6 747 aa29.71■■■□□ 2.35
SLC48A1-208ENST00000551301 NRXN1Q9ULB1 1477 aa29.71■■■□□ 2.35
SLC48A1-208ENST00000551301 CFAP70Q5T0N1 1121 aa29.7■■■□□ 2.35
SLC48A1-208ENST00000551301 STAC3Q96MF2 364 aa29.69■■■□□ 2.34
SLC48A1-208ENST00000551301 NPHP3Q7Z494 1330 aa29.67■■■□□ 2.34
SLC48A1-208ENST00000551301 PNPLA6Q8IY17 1366 aa29.66■■■□□ 2.34
SLC48A1-208ENST00000551301 SOS2Q07890 1332 aaPredicted RBP29.66■■■□□ 2.34
SLC48A1-208ENST00000551301 DCAF11Q8TEB1 546 aa29.65■■■□□ 2.34
SLC48A1-208ENST00000551301 KDM2AQ9Y2K7 1162 aa29.64■■■□□ 2.34
SLC48A1-208ENST00000551301 PLEKHH1Q9ULM0 1364 aa29.63■■■□□ 2.33
SLC48A1-208ENST00000551301 NUTM2FA1L443 756 aa29.61■■■□□ 2.33
SLC48A1-208ENST00000551301 POGKQ9P215 609 aa29.61■■■□□ 2.33
SLC48A1-208ENST00000551301 FOXO3O43524 673 aa29.58■■■□□ 2.33
SLC48A1-208ENST00000551301 AFF2P51816 1311 aa29.58■■■□□ 2.33
SLC48A1-208ENST00000551301 C8orf37Q96NL8 207 aa29.58■■■□□ 2.33
SLC48A1-208ENST00000551301 PRAM1Q96QH2 718 aa29.58■■■□□ 2.33
SLC48A1-208ENST00000551301 ADAMTS2O95450 1211 aa29.55■■■□□ 2.32
SLC48A1-208ENST00000551301 RXRBP28702 533 aa29.55■■■□□ 2.32
SLC48A1-208ENST00000551301 SAFB2Q14151 953 aaKnown RBP eCLIP29.55■■■□□ 2.32
SLC48A1-208ENST00000551301 FMN2Q9NZ56 1722 aa29.54■■■□□ 2.32
SLC48A1-208ENST00000551301 NGLY1Q96IV0 654 aa29.54■■■□□ 2.32
SLC48A1-208ENST00000551301 DLC1Q96QB1 1528 aa29.54■■■□□ 2.32
SLC48A1-208ENST00000551301 XPCQ01831 940 aaPredicted RBP29.51■■■□□ 2.31
SLC48A1-208ENST00000551301 TRAK1Q9UPV9 953 aa29.51■■■□□ 2.31
SLC48A1-208ENST00000551301 KIF1AQ12756 1690 aa29.5■■■□□ 2.31
SLC48A1-208ENST00000551301 PXDNQ92626 1479 aa29.49■■■□□ 2.31
SLC48A1-208ENST00000551301 ADGRB1O14514 1584 aa29.48■■■□□ 2.31
SLC48A1-208ENST00000551301 PHF8Q9UPP1 1060 aa29.47■■■□□ 2.31
SLC48A1-208ENST00000551301 PSME1Q06323 249 aa29.46■■■□□ 2.31
SLC48A1-208ENST00000551301 QTRT2Q9H974 415 aaKnown RBP29.46■■■□□ 2.31
SLC48A1-208ENST00000551301 COL22A1Q8NFW1 1626 aaPredicted RBP29.45■■■□□ 2.31
SLC48A1-208ENST00000551301 EIF3AQ14152 1382 aaKnown RBP29.45■■■□□ 2.31
SLC48A1-208ENST00000551301 KRT28Q7Z3Y7 464 aa29.44■■■□□ 2.3
SLC48A1-208ENST00000551301 CDK12Q9NYV4 1490 aaPredicted RBP29.42■■■□□ 2.3
SLC48A1-208ENST00000551301 RBM6P78332 1123 aaKnown RBP29.41■■■□□ 2.3
SLC48A1-208ENST00000551301 ANKARQ7Z5J8 1434 aa29.41■■■□□ 2.3
SLC48A1-208ENST00000551301 USP21Q9UK80 565 aa29.41■■■□□ 2.3
SLC48A1-208ENST00000551301 MINK1Q8N4C8 1332 aaPredicted RBP29.41■■■□□ 2.3
SLC48A1-208ENST00000551301 SPATA31A3Q5VYP0 1347 aa29.4■■■□□ 2.3
SLC48A1-208ENST00000551301 HIRIP3Q9BW71 556 aaPredicted RBP29.39■■■□□ 2.3
SLC48A1-208ENST00000551301 ADGRB2O60241 1585 aa29.39■■■□□ 2.29
SLC48A1-208ENST00000551301 RGPD8O14715 1765 aaPredicted RBP29.38■■■□□ 2.29
SLC48A1-208ENST00000551301 HAP1P54257 671 aaPredicted RBP29.36■■■□□ 2.29
SLC48A1-208ENST00000551301 FNBP4Q8N3X1 1017 aaPredicted RBP29.36■■■□□ 2.29
SLC48A1-208ENST00000551301 TRPC5Q9UL62 973 aaPredicted RBP29.36■■■□□ 2.29
SLC48A1-208ENST00000551301 WASLO00401 505 aaPredicted RBP29.34■■■□□ 2.29
SLC48A1-208ENST00000551301 LMOD2Q6P5Q4 547 aa29.33■■■□□ 2.29
SLC48A1-208ENST00000551301 PMFBP1Q8TBY8 1022 aa29.33■■■□□ 2.29
SLC48A1-208ENST00000551301 TNS3Q68CZ2 1445 aa29.32■■■□□ 2.28
SLC48A1-208ENST00000551301 SBNO1A3KN83 1393 aa29.32■■■□□ 2.28
SLC48A1-208ENST00000551301 ARHGEF10O15013 1369 aa29.31■■■□□ 2.28
SLC48A1-208ENST00000551301 GPRASP1Q5JY77 1395 aa29.31■■■□□ 2.28
SLC48A1-208ENST00000551301 KIAA1210Q9ULL0 1709 aa29.3■■■□□ 2.28
SLC48A1-208ENST00000551301 TULP4Q9NRJ4 1543 aa29.29■■■□□ 2.28
SLC48A1-208ENST00000551301 MARF1Q9Y4F3 1742 aaKnown RBP29.28■■■□□ 2.28
SLC48A1-208ENST00000551301 USP32Q8NFA0 1604 aa29.27■■■□□ 2.28
SLC48A1-208ENST00000551301 ARHGEF28Q8N1W1 1705 aaKnown RBP29.27■■■□□ 2.28
SLC48A1-208ENST00000551301 NGDNQ8NEJ9 315 aaKnown RBP29.26■■■□□ 2.27
SLC48A1-208ENST00000551301 RGS12O14924 1447 aa29.24■■■□□ 2.27
SLC48A1-208ENST00000551301 UPF1Q92900 1129 aaKnown RBP eCLIP29.24■■■□□ 2.27
SLC48A1-208ENST00000551301 ATRNO75882 1429 aa29.23■■■□□ 2.27
SLC48A1-208ENST00000551301 PLEKHG5O94827 1062 aa29.23■■■□□ 2.27
SLC48A1-208ENST00000551301 PRR36Q9H6K5 1346 aa29.22■■■□□ 2.27
SLC48A1-208ENST00000551301 NBPF1Q3BBV0 1214 aa29.2■■■□□ 2.26
SLC48A1-208ENST00000551301 CABLES1Q8TDN4 633 aa29.2■■■□□ 2.26
SLC48A1-208ENST00000551301 NUDT16Q96DE0 195 aaKnown RBP29.2■■■□□ 2.26
SLC48A1-208ENST00000551301 BCL9LQ86UU0 1499 aa29.2■■■□□ 2.26
SLC48A1-208ENST00000551301 UNC5CLQ8IV45 518 aa29.19■■■□□ 2.26
SLC48A1-208ENST00000551301 L3MBTL2Q969R5 705 aa29.19■■■□□ 2.26
SLC48A1-208ENST00000551301 CDK19Q9BWU1 502 aa29.19■■■□□ 2.26
SLC48A1-208ENST00000551301 ITSN1Q15811 1721 aa29.18■■■□□ 2.26
SLC48A1-208ENST00000551301 NEUROD1Q13562 356 aa29.18■■■□□ 2.26
SLC48A1-208ENST00000551301 PAK3O75914 559 aaPredicted RBP29.17■■■□□ 2.26
SLC48A1-208ENST00000551301 GJD4Q96KN9 370 aaPredicted RBP29.16■■■□□ 2.26
SLC48A1-208ENST00000551301 SIN3AQ96ST3 1273 aa29.15■■■□□ 2.26
SLC48A1-208ENST00000551301 CENPJQ9HC77 1338 aaPredicted RBP29.15■■■□□ 2.26
SLC48A1-208ENST00000551301 ATAD2Q6PL18 1390 aa29.14■■■□□ 2.26
SLC48A1-208ENST00000551301 SLIT2O94813 1529 aa29.14■■■□□ 2.25
SLC48A1-208ENST00000551301 ATP7BP35670 1465 aa29.13■■■□□ 2.25
SLC48A1-208ENST00000551301 CCDC61Q9Y6R9 512 aa29.13■■■□□ 2.25
SLC48A1-208ENST00000551301 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.13■■■□□ 2.25
SLC48A1-208ENST00000551301 TRPM3Q9HCF6 1732 aaPredicted RBP29.11■■■□□ 2.25
SLC48A1-208ENST00000551301 SRPK2P78362 688 aaKnown RBP29.1■■■□□ 2.25
SLC48A1-208ENST00000551301 CCDC9Q9Y3X0 531 aaKnown RBP29.09■■■□□ 2.25
SLC48A1-208ENST00000551301 ABCA3Q99758 1704 aa29.08■■■□□ 2.25
SLC48A1-208ENST00000551301 ALS2Q96Q42 1657 aa29.07■■■□□ 2.24
SLC48A1-208ENST00000551301 NWD2Q9ULI1 1742 aa29.06■■■□□ 2.24
SLC48A1-208ENST00000551301 PLEKHG3A1L390 1219 aa29.05■■■□□ 2.24
SLC48A1-208ENST00000551301 VPS72Q15906 364 aa29.05■■■□□ 2.24
SLC48A1-208ENST00000551301 RALGAPBQ86X10 1494 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms