RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 SPIRE2Q8WWL2 714 aa9.85□□□□□ -0.83
SCAF11-214ENST00000550893 FAM160A2Q8N612 972 aaPredicted RBP9.84□□□□□ -0.83
SCAF11-214ENST00000550893 Q3C1V9 767 aa9.83□□□□□ -0.84
SCAF11-214ENST00000550893 PRKD2Q9BZL6 878 aa9.83□□□□□ -0.84
SCAF11-214ENST00000550893 Q6ZNB5 142 aa9.82□□□□□ -0.84
SCAF11-214ENST00000550893 ANKLE1Q8NAG6 615 aa9.81□□□□□ -0.84
SCAF11-214ENST00000550893 MOXD2PA6NHM9 499 aa9.8□□□□□ -0.84
SCAF11-214ENST00000550893 NDUFV2P19404 249 aa9.8□□□□□ -0.84
SCAF11-214ENST00000550893 TBC1D2Q9BYX2 928 aa9.8□□□□□ -0.84
SCAF11-214ENST00000550893 PRDM9Q9NQV7 894 aa9.8□□□□□ -0.84
SCAF11-214ENST00000550893 PCDHGC3Q9UN70 934 aa9.8□□□□□ -0.84
SCAF11-214ENST00000550893 FDX1P10109 184 aa9.79□□□□□ -0.84
SCAF11-214ENST00000550893 SYMPKQ92797 1274 aaKnown RBP9.79□□□□□ -0.84
SCAF11-214ENST00000550893 MSS51Q4VC12 460 aa9.78□□□□□ -0.84
SCAF11-214ENST00000550893 EMID1Q96A84 441 aaPredicted RBP9.78□□□□□ -0.84
SCAF11-214ENST00000550893 USB1Q9BQ65 265 aaKnown RBP9.78□□□□□ -0.84
SCAF11-214ENST00000550893 V9GY48 417 aaPredicted RBP9.78□□□□□ -0.84
SCAF11-214ENST00000550893 GPBP1L1Q9HC44 474 aaPredicted RBP9.77□□□□□ -0.85
SCAF11-214ENST00000550893 LAPTM4AQ15012 233 aa9.76□□□□□ -0.85
SCAF11-214ENST00000550893 DIXDC1Q155Q3 683 aa9.76□□□□□ -0.85
SCAF11-214ENST00000550893 TPRNQ4KMQ1 711 aa9.76□□□□□ -0.85
SCAF11-214ENST00000550893 PLA2G2CQ5R387 149 aa9.76□□□□□ -0.85
SCAF11-214ENST00000550893 SLC19A1P41440 591 aa9.75□□□□□ -0.85
SCAF11-214ENST00000550893 LIAT1Q6ZQX7 453 aa9.75□□□□□ -0.85
SCAF11-214ENST00000550893 FCF1Q9Y324 198 aaKnown RBP9.75□□□□□ -0.85
SCAF11-214ENST00000550893 MMP16P51512 607 aa9.74□□□□□ -0.85
SCAF11-214ENST00000550893 KDM4CQ9H3R0 1056 aa9.74□□□□□ -0.85
SCAF11-214ENST00000550893 C6orf229H3BNL8 230 aa9.73□□□□□ -0.85
SCAF11-214ENST00000550893 RSBN1LQ6PCB5 846 aaPredicted RBP9.73□□□□□ -0.85
SCAF11-214ENST00000550893 CECR2Q9BXF3 1484 aa9.72□□□□□ -0.85
SCAF11-214ENST00000550893 DXOO77932 396 aaKnown RBP9.72□□□□□ -0.85
SCAF11-214ENST00000550893 GJA5P36382 358 aa9.72□□□□□ -0.85
SCAF11-214ENST00000550893 RETREG3Q86VR2 466 aa9.72□□□□□ -0.85
SCAF11-214ENST00000550893 SPTLC1O15269 473 aa9.71□□□□□ -0.86
SCAF11-214ENST00000550893 MYSM1Q5VVJ2 828 aa9.71□□□□□ -0.86
SCAF11-214ENST00000550893 SPRYD7Q5W111 196 aa9.71□□□□□ -0.86
SCAF11-214ENST00000550893 RIC3Q7Z5B4 369 aa9.71□□□□□ -0.86
SCAF11-214ENST00000550893 PCDHB15Q9Y5E8 787 aa9.71□□□□□ -0.86
SCAF11-214ENST00000550893 MTMR2Q13614 643 aa9.69□□□□□ -0.86
SCAF11-214ENST00000550893 FAM117AQ9C073 453 aa9.69□□□□□ -0.86
SCAF11-214ENST00000550893 SMARCA4P51532 1647 aa9.68□□□□□ -0.86
SCAF11-214ENST00000550893 JUNDP17535 347 aa9.68□□□□□ -0.86
SCAF11-214ENST00000550893 LIMD1Q9UGP4 676 aa9.68□□□□□ -0.86
SCAF11-214ENST00000550893 CSPP1Q1MSJ5 1256 aa9.67□□□□□ -0.86
SCAF11-214ENST00000550893 ZNF598Q86UK7 904 aaKnown RBP9.67□□□□□ -0.86
SCAF11-214ENST00000550893 HRCP23327 699 aa9.66□□□□□ -0.86
SCAF11-214ENST00000550893 RPIAP49247 311 aa9.66□□□□□ -0.86
SCAF11-214ENST00000550893 PRR7Q8TB68 274 aa9.66□□□□□ -0.86
SCAF11-214ENST00000550893 SPDYE5A6NIY4 337 aa9.65□□□□□ -0.86
SCAF11-214ENST00000550893 GFRA3O60609 400 aa9.65□□□□□ -0.86
SCAF11-214ENST00000550893 NEUROD2Q15784 382 aa9.65□□□□□ -0.86
SCAF11-214ENST00000550893 ZNF697Q5TEC3 545 aa9.65□□□□□ -0.86
SCAF11-214ENST00000550893 CCDC24Q8N4L8 307 aa9.65□□□□□ -0.86
SCAF11-214ENST00000550893 CABLES1Q8TDN4 633 aa9.65□□□□□ -0.86
SCAF11-214ENST00000550893 DDRGK1Q96HY6 314 aa9.65□□□□□ -0.86
SCAF11-214ENST00000550893 RSPH6AQ9H0K4 717 aa9.65□□□□□ -0.86
SCAF11-214ENST00000550893 POLR3EQ9NVU0 708 aa9.65□□□□□ -0.86
SCAF11-214ENST00000550893 PLEKHG3A1L390 1219 aa9.64□□□□□ -0.87
SCAF11-214ENST00000550893 CLK2P49760 499 aaKnown RBP9.64□□□□□ -0.87
SCAF11-214ENST00000550893 PRPF38BQ5VTL8 546 aaKnown RBP9.64□□□□□ -0.87
SCAF11-214ENST00000550893 ZBTB3Q9H5J0 574 aa9.64□□□□□ -0.87
SCAF11-214ENST00000550893 ZBTB24O43167 697 aaPredicted RBP9.63□□□□□ -0.87
SCAF11-214ENST00000550893 QPCTQ16769 361 aa9.63□□□□□ -0.87
SCAF11-214ENST00000550893 TUSC1Q2TAM9 212 aa9.63□□□□□ -0.87
SCAF11-214ENST00000550893 TRIM67Q6ZTA4 783 aa9.63□□□□□ -0.87
SCAF11-214ENST00000550893 PDZRN3Q9UPQ7 1066 aa9.63□□□□□ -0.87
SCAF11-214ENST00000550893 CFAP99D6REC4 459 aa9.62□□□□□ -0.87
SCAF11-214ENST00000550893 CD2BP2O95400 341 aaKnown RBP9.62□□□□□ -0.87
SCAF11-214ENST00000550893 NUDT12Q9BQG2 462 aa9.62□□□□□ -0.87
SCAF11-214ENST00000550893 PEG3Q9GZU2 1588 aa9.62□□□□□ -0.87
SCAF11-214ENST00000550893 LILRB3O75022 631 aa9.61□□□□□ -0.87
SCAF11-214ENST00000550893 BRPF1P55201 1214 aaPredicted RBP9.61□□□□□ -0.87
SCAF11-214ENST00000550893 DESI1Q6ICB0 168 aa9.61□□□□□ -0.87
SCAF11-214ENST00000550893 TRAF7Q6Q0C0 670 aa9.61□□□□□ -0.87
SCAF11-214ENST00000550893 NUTM2BA6NNL0 878 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-214ENST00000550893 NUTM2EB1AL46 878 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-214ENST00000550893 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-214ENST00000550893 SKIV2LQ15477 1246 aaKnown RBP9.6□□□□□ -0.87
SCAF11-214ENST00000550893 NUTM2DQ5VT03 806 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-214ENST00000550893 NUTM2AQ8IVF1 878 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-214ENST00000550893 NRG2O14511 850 aaPredicted RBP9.59□□□□□ -0.87
SCAF11-214ENST00000550893 GDF9O60383 454 aa9.59□□□□□ -0.87
SCAF11-214ENST00000550893 CCNYL3P0C7X3 344 aa9.59□□□□□ -0.87
SCAF11-214ENST00000550893 TRIM32Q13049 653 aa9.59□□□□□ -0.87
SCAF11-214ENST00000550893 PTPRNQ16849 979 aa9.59□□□□□ -0.87
SCAF11-214ENST00000550893 SH3D19Q5HYK7 790 aa9.59□□□□□ -0.87
SCAF11-214ENST00000550893 RTL5Q5HYW3 569 aaPredicted RBP9.59□□□□□ -0.87
SCAF11-214ENST00000550893 PTCRAQ6ISU1 281 aaPredicted RBP9.59□□□□□ -0.87
SCAF11-214ENST00000550893 MROH2BQ7Z745 1585 aa9.58□□□□□ -0.88
SCAF11-214ENST00000550893 HMGXB3Q12766 1538 aa9.58□□□□□ -0.88
SCAF11-214ENST00000550893 TNFRSF10AO00220 468 aa9.58□□□□□ -0.88
SCAF11-214ENST00000550893 FOXC1Q12948 553 aa9.58□□□□□ -0.88
SCAF11-214ENST00000550893 PROCA1Q8NCQ7 364 aaPredicted RBP9.58□□□□□ -0.88
SCAF11-214ENST00000550893 PKD2L1Q9P0L9 805 aa9.58□□□□□ -0.88
SCAF11-214ENST00000550893 ATAD2BQ9ULI0 1458 aa9.58□□□□□ -0.88
SCAF11-214ENST00000550893 PRR20EP86478 221 aa9.57□□□□□ -0.88
SCAF11-214ENST00000550893 PRR20CP86479 221 aa9.57□□□□□ -0.88
SCAF11-214ENST00000550893 PRR20DP86480 221 aa9.57□□□□□ -0.88
SCAF11-214ENST00000550893 PRR20BP86481 221 aa9.57□□□□□ -0.88
SCAF11-214ENST00000550893 PRR20AP86496 221 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms