RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 CRBNQ96SW2 442 aa18.72■□□□□ 0.59
CALCOCO1-218ENST00000550804 ESF1Q9H501 851 aaKnown RBP18.72■□□□□ 0.59
CALCOCO1-218ENST00000550804 SLC24A1O60721 1099 aa18.72■□□□□ 0.59
CALCOCO1-218ENST00000550804 ZNF521Q96K83 1311 aa18.71■□□□□ 0.59
CALCOCO1-218ENST00000550804 SAFB2Q14151 953 aaKnown RBP eCLIP18.71■□□□□ 0.59
CALCOCO1-218ENST00000550804 STAG3Q9UJ98 1225 aa18.71■□□□□ 0.59
CALCOCO1-218ENST00000550804 NPC1L1Q9UHC9 1359 aa18.7■□□□□ 0.58
CALCOCO1-218ENST00000550804 MYO3AQ8NEV4 1616 aa18.7■□□□□ 0.58
CALCOCO1-218ENST00000550804 GOLGA2Q08379 1002 aa18.7■□□□□ 0.58
CALCOCO1-218ENST00000550804 SBNO2Q9Y2G9 1366 aa18.69■□□□□ 0.58
CALCOCO1-218ENST00000550804 DMRT2Q9Y5R5 561 aa18.69■□□□□ 0.58
CALCOCO1-218ENST00000550804 MYOM1P52179 1685 aa18.68■□□□□ 0.58
CALCOCO1-218ENST00000550804 A2ML1A8K2U0 1454 aa18.67■□□□□ 0.58
CALCOCO1-218ENST00000550804 SLFN5Q08AF3 891 aa18.66■□□□□ 0.58
CALCOCO1-218ENST00000550804 STK26Q9P289 416 aa18.66■□□□□ 0.58
CALCOCO1-218ENST00000550804 MORC1Q86VD1 984 aa18.65■□□□□ 0.58
CALCOCO1-218ENST00000550804 KDM5AP29375 1690 aaKnown RBP18.64■□□□□ 0.57
CALCOCO1-218ENST00000550804 CABP2Q9NPB3 220 aa18.63■□□□□ 0.57
CALCOCO1-218ENST00000550804 NSD3Q9BZ95 1437 aa18.63■□□□□ 0.57
CALCOCO1-218ENST00000550804 NEUROD2Q15784 382 aa18.62■□□□□ 0.57
CALCOCO1-218ENST00000550804 PAK3O75914 559 aaPredicted RBP18.61■□□□□ 0.57
CALCOCO1-218ENST00000550804 ERICH6Q7L0X2 663 aa18.61■□□□□ 0.57
CALCOCO1-218ENST00000550804 TRMT2AQ8IZ69 625 aaKnown RBP18.61■□□□□ 0.57
CALCOCO1-218ENST00000550804 QRICH2Q9H0J4 1663 aa18.61■□□□□ 0.57
CALCOCO1-218ENST00000550804 RIMS2Q9UQ26 1411 aa18.6■□□□□ 0.57
CALCOCO1-218ENST00000550804 BCAR3O75815 825 aa18.6■□□□□ 0.57
CALCOCO1-218ENST00000550804 RRP7AQ9Y3A4 280 aaKnown RBP18.6■□□□□ 0.57
CALCOCO1-218ENST00000550804 TNRQ92752 1358 aa18.59■□□□□ 0.57
CALCOCO1-218ENST00000550804 ARHGEF28Q8N1W1 1705 aaKnown RBP18.59■□□□□ 0.57
CALCOCO1-218ENST00000550804 ALKQ9UM73 1620 aa18.59■□□□□ 0.57
CALCOCO1-218ENST00000550804 MTHFSP49914 203 aa18.58■□□□□ 0.57
CALCOCO1-218ENST00000550804 CEBPAP49715 358 aaPredicted RBP18.57■□□□□ 0.56
CALCOCO1-218ENST00000550804 YTHDC2Q9H6S0 1430 aaKnown RBP18.56■□□□□ 0.56
CALCOCO1-218ENST00000550804 DNAJC5Q9H3Z4 198 aa18.56■□□□□ 0.56
CALCOCO1-218ENST00000550804 PDE4AP27815 886 aa18.56■□□□□ 0.56
CALCOCO1-218ENST00000550804 WWC1Q8IX03 1113 aa18.56■□□□□ 0.56
CALCOCO1-218ENST00000550804 EVC2Q86UK5 1308 aa18.55■□□□□ 0.56
CALCOCO1-218ENST00000550804 TCERG1O14776 1098 aaKnown RBP18.55■□□□□ 0.56
CALCOCO1-218ENST00000550804 NPM2Q86SE8 214 aaKnown RBP18.55■□□□□ 0.56
CALCOCO1-218ENST00000550804 POLR3AO14802 1390 aaPredicted RBP18.54■□□□□ 0.56
CALCOCO1-218ENST00000550804 PTPRMP28827 1452 aa18.54■□□□□ 0.56
CALCOCO1-218ENST00000550804 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.53■□□□□ 0.56
CALCOCO1-218ENST00000550804 PUS7Q96PZ0 661 aaKnown RBP18.53■□□□□ 0.56
CALCOCO1-218ENST00000550804 CGNL1Q0VF96 1302 aa18.53■□□□□ 0.56
CALCOCO1-218ENST00000550804 E9PSI1 815 aa18.53■□□□□ 0.56
CALCOCO1-218ENST00000550804 SRPK2P78362 688 aaKnown RBP18.53■□□□□ 0.56
CALCOCO1-218ENST00000550804 PRAM1Q96QH2 718 aa18.53■□□□□ 0.56
CALCOCO1-218ENST00000550804 TULP4Q9NRJ4 1543 aa18.53■□□□□ 0.56
CALCOCO1-218ENST00000550804 NOP58Q9Y2X3 529 aaKnown RBP18.52■□□□□ 0.56
CALCOCO1-218ENST00000550804 MINK1Q8N4C8 1332 aaPredicted RBP18.52■□□□□ 0.56
CALCOCO1-218ENST00000550804 TCP11L2Q8N4U5 519 aa18.52■□□□□ 0.55
CALCOCO1-218ENST00000550804 ANP32AP39687 249 aaKnown RBP18.51■□□□□ 0.55
CALCOCO1-218ENST00000550804 IPO9Q96P70 1041 aaKnown RBP18.51■□□□□ 0.55
CALCOCO1-218ENST00000550804 BACH2Q9BYV9 841 aa18.51■□□□□ 0.55
CALCOCO1-218ENST00000550804 POGKQ9P215 609 aa18.5■□□□□ 0.55
CALCOCO1-218ENST00000550804 TMEM2Q9UHN6 1383 aa18.5■□□□□ 0.55
CALCOCO1-218ENST00000550804 PRKCSHP14314 528 aaPredicted RBP18.49■□□□□ 0.55
CALCOCO1-218ENST00000550804 HDGFP51858 240 aaKnown RBP18.49■□□□□ 0.55
CALCOCO1-218ENST00000550804 GGNBP2Q9H3C7 697 aa18.49■□□□□ 0.55
CALCOCO1-218ENST00000550804 UBR1Q8IWV7 1749 aa18.49■□□□□ 0.55
CALCOCO1-218ENST00000550804 KDM2BQ8NHM5 1336 aa18.49■□□□□ 0.55
CALCOCO1-218ENST00000550804 SETD1AO15047 1707 aaKnown RBP18.48■□□□□ 0.55
CALCOCO1-218ENST00000550804 RUNDC1Q96C34 613 aa18.48■□□□□ 0.55
CALCOCO1-218ENST00000550804 NRXN3Q9Y4C0 1643 aa18.48■□□□□ 0.55
CALCOCO1-218ENST00000550804 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.48■□□□□ 0.55
CALCOCO1-218ENST00000550804 NKTRP30414 1462 aaKnown RBP18.48■□□□□ 0.55
CALCOCO1-218ENST00000550804 C3P01024 1663 aa18.47■□□□□ 0.55
CALCOCO1-218ENST00000550804 NLRP1Q9C000 1473 aa18.47■□□□□ 0.55
CALCOCO1-218ENST00000550804 PLPPR3Q6T4P5 718 aa18.47■□□□□ 0.55
CALCOCO1-218ENST00000550804 U2AF1L5P0DN76 240 aaPredicted RBP18.46■□□□□ 0.55
CALCOCO1-218ENST00000550804 U2AF1Q01081 240 aaKnown RBP eCLIP18.46■□□□□ 0.553e-6■■□□□ 12.1
CALCOCO1-218ENST00000550804 METP08581 1390 aa18.46■□□□□ 0.55
CALCOCO1-218ENST00000550804 ANKRD36BQ8N2N9 1353 aa18.46■□□□□ 0.55
CALCOCO1-218ENST00000550804 ABCC11Q96J66 1382 aa18.45■□□□□ 0.54
CALCOCO1-218ENST00000550804 FER1L4A9Z1Z3 1794 aa18.45■□□□□ 0.54
CALCOCO1-218ENST00000550804 MS4A1P11836 297 aa18.45■□□□□ 0.54
CALCOCO1-218ENST00000550804 WAPLQ7Z5K2 1190 aa18.45■□□□□ 0.54
CALCOCO1-218ENST00000550804 LTKP29376 864 aa18.44■□□□□ 0.54
CALCOCO1-218ENST00000550804 PANK1Q8TE04 598 aa18.44■□□□□ 0.54
CALCOCO1-218ENST00000550804 ZBTB47Q9UFB7 747 aaPredicted RBP18.44■□□□□ 0.54
CALCOCO1-218ENST00000550804 A0A1W2PP64 1363 aa18.44■□□□□ 0.54
CALCOCO1-218ENST00000550804 DLC1Q96QB1 1528 aa18.43■□□□□ 0.54
CALCOCO1-218ENST00000550804 NBR1Q14596 966 aa18.43■□□□□ 0.54
CALCOCO1-218ENST00000550804 FRAT1Q92837 279 aaPredicted RBP18.43■□□□□ 0.54
CALCOCO1-218ENST00000550804 FYB1O15117 783 aa18.43■□□□□ 0.54
CALCOCO1-218ENST00000550804 FBLN1P23142 703 aa18.43■□□□□ 0.54
CALCOCO1-218ENST00000550804 CFAP53Q96M91 514 aa18.43■□□□□ 0.54
CALCOCO1-218ENST00000550804 BCL2L13Q9BXK5 485 aa18.43■□□□□ 0.54
CALCOCO1-218ENST00000550804 CENPQQ7L2Z9 268 aaPredicted RBP18.42■□□□□ 0.54
CALCOCO1-218ENST00000550804 CDK19Q9BWU1 502 aa18.42■□□□□ 0.54
CALCOCO1-218ENST00000550804 CABP1Q9NZU7 370 aa18.42■□□□□ 0.54
CALCOCO1-218ENST00000550804 NGEFQ8N5V2 710 aa18.41■□□□□ 0.54
CALCOCO1-218ENST00000550804 PHF23Q9BUL5 403 aaPredicted RBP18.41■□□□□ 0.54
CALCOCO1-218ENST00000550804 TNNQ9UQP3 1299 aa18.41■□□□□ 0.54
CALCOCO1-218ENST00000550804 COG6Q9Y2V7 657 aa18.41■□□□□ 0.54
CALCOCO1-218ENST00000550804 U2SURPO15042 1029 aaKnown RBP18.4■□□□□ 0.54
CALCOCO1-218ENST00000550804 IGHDP01880 384 aa18.4■□□□□ 0.54
CALCOCO1-218ENST00000550804 TXNDC2Q86VQ3 553 aa18.4■□□□□ 0.54
CALCOCO1-218ENST00000550804 RGS3P49796 1198 aa18.39■□□□□ 0.54
CALCOCO1-218ENST00000550804 RARSP54136 660 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms