RNA–Protein interactions for RNA: ENST00000548796.1

PACS2-208, Transcript of phosphofurin acidic cluster sorting protein 2, humanhuman

TSL 5

Gene PACS2, Length 1,621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2-208ENST00000548796 SIRT1Q96EB6 747 aa26.77■■□□□ 1.88
PACS2-208ENST00000548796 SLC12A5Q9H2X9 1139 aa26.77■■□□□ 1.88
PACS2-208ENST00000548796 KNDC1Q76NI1 1749 aa26.77■■□□□ 1.88
PACS2-208ENST00000548796 ANKRD36BQ8N2N9 1353 aa26.77■■□□□ 1.88
PACS2-208ENST00000548796 SLIT1O75093 1534 aa26.76■■□□□ 1.88
PACS2-208ENST00000548796 NSD3Q9BZ95 1437 aa26.75■■□□□ 1.87
PACS2-208ENST00000548796 SRPK2P78362 688 aaKnown RBP26.75■■□□□ 1.87
PACS2-208ENST00000548796 CABP2Q9NPB3 220 aa26.75■■□□□ 1.87
PACS2-208ENST00000548796 ARHGAP23Q9P227 1491 aa26.74■■□□□ 1.87
PACS2-208ENST00000548796 MINK1Q8N4C8 1332 aaPredicted RBP26.74■■□□□ 1.87
PACS2-208ENST00000548796 TECPR2O15040 1411 aa26.74■■□□□ 1.87
PACS2-208ENST00000548796 EID1Q9Y6B2 187 aa26.74■■□□□ 1.87
PACS2-208ENST00000548796 METP08581 1390 aa26.74■■□□□ 1.87
PACS2-208ENST00000548796 FAM135BQ49AJ0 1406 aa26.73■■□□□ 1.87
PACS2-208ENST00000548796 BCANQ96GW7 911 aa26.72■■□□□ 1.87
PACS2-208ENST00000548796 THEMISQ8N1K5 641 aaPredicted RBP26.72■■□□□ 1.87
PACS2-208ENST00000548796 TXNDC2Q86VQ3 553 aa26.71■■□□□ 1.87
PACS2-208ENST00000548796 CPS1P31327 1500 aa26.7■■□□□ 1.86
PACS2-208ENST00000548796 ADAMTS13Q76LX8 1427 aa26.7■■□□□ 1.86
PACS2-208ENST00000548796 NSD2O96028 1365 aa26.69■■□□□ 1.86
PACS2-208ENST00000548796 CGNL1Q0VF96 1302 aa26.69■■□□□ 1.86
PACS2-208ENST00000548796 RIMS1Q86UR5 1692 aaKnown RBP26.68■■□□□ 1.86
PACS2-208ENST00000548796 LTKP29376 864 aa26.68■■□□□ 1.86
PACS2-208ENST00000548796 CDK19Q9BWU1 502 aa26.67■■□□□ 1.86
PACS2-208ENST00000548796 ADAMTSL3P82987 1691 aa26.66■■□□□ 1.86
PACS2-208ENST00000548796 NEFLP07196 543 aa26.65■■□□□ 1.86
PACS2-208ENST00000548796 PLPPR3Q6T4P5 718 aa26.65■■□□□ 1.86
PACS2-208ENST00000548796 WAPLQ7Z5K2 1190 aa26.65■■□□□ 1.86
PACS2-208ENST00000548796 TERF2IPQ9NYB0 399 aa26.65■■□□□ 1.86
PACS2-208ENST00000548796 BLMP54132 1417 aaPredicted RBP26.65■■□□□ 1.86
PACS2-208ENST00000548796 MED14O60244 1454 aa26.65■■□□□ 1.86
PACS2-208ENST00000548796 PLEKHH1Q9ULM0 1364 aa26.64■■□□□ 1.86
PACS2-208ENST00000548796 MORC1Q86VD1 984 aa26.63■■□□□ 1.85
PACS2-208ENST00000548796 DIP2AQ14689 1571 aa26.62■■□□□ 1.85
PACS2-208ENST00000548796 CEP170BQ9Y4F5 1589 aaPredicted RBP26.62■■□□□ 1.85
PACS2-208ENST00000548796 SUPT16HQ9Y5B9 1047 aaKnown RBP26.61■■□□□ 1.85
PACS2-208ENST00000548796 A0A1W2PP64 1363 aa26.61■■□□□ 1.85
PACS2-208ENST00000548796 WDR43Q15061 677 aaKnown RBP eCLIP26.61■■□□□ 1.85
PACS2-208ENST00000548796 SMG6Q86US8 1419 aaKnown RBP26.6■■□□□ 1.85
PACS2-208ENST00000548796 HDGFL2Q7Z4V5 671 aaPredicted RBP26.6■■□□□ 1.85
PACS2-208ENST00000548796 TBX22Q9Y458 520 aa26.59■■□□□ 1.85
PACS2-208ENST00000548796 WASLO00401 505 aaPredicted RBP26.58■■□□□ 1.85
PACS2-208ENST00000548796 POLR3AO14802 1390 aaPredicted RBP26.57■■□□□ 1.84
PACS2-208ENST00000548796 ATP7BP35670 1465 aa26.57■■□□□ 1.84
PACS2-208ENST00000548796 CD163L1Q9NR16 1453 aa26.57■■□□□ 1.84
PACS2-208ENST00000548796 ZNF142P52746 1687 aaPredicted RBP26.55■■□□□ 1.84
PACS2-208ENST00000548796 PDE3BQ13370 1112 aa26.54■■□□□ 1.84
PACS2-208ENST00000548796 NUDCQ9Y266 331 aa26.54■■□□□ 1.84
PACS2-208ENST00000548796 ADAMTS8Q9UP79 889 aa26.54■■□□□ 1.84
PACS2-208ENST00000548796 ADGRB2O60241 1585 aa26.53■■□□□ 1.84
PACS2-208ENST00000548796 FKBP8Q14318 412 aa26.53■■□□□ 1.84
PACS2-208ENST00000548796 ROBO2Q9HCK4 1378 aa26.53■■□□□ 1.84
PACS2-208ENST00000548796 CABP1Q9NZU7 370 aa26.52■■□□□ 1.84
PACS2-208ENST00000548796 SLC26A8Q96RN1 970 aa26.5■■□□□ 1.83
PACS2-208ENST00000548796 ANKRD26Q9UPS8 1709 aa26.5■■□□□ 1.83
PACS2-208ENST00000548796 PTPRUQ92729 1446 aa26.49■■□□□ 1.83
PACS2-208ENST00000548796 PTCH1Q13635 1447 aa26.49■■□□□ 1.83
PACS2-208ENST00000548796 PIK3R4Q99570 1358 aa26.48■■□□□ 1.83
PACS2-208ENST00000548796 PPIP5K1Q6PFW1 1433 aa26.47■■□□□ 1.83
PACS2-208ENST00000548796 SETD1BQ9UPS6 1966 aaKnown RBP26.47■■□□□ 1.83
PACS2-208ENST00000548796 CFAP53Q96M91 514 aa26.47■■□□□ 1.83
PACS2-208ENST00000548796 NUDT16Q96DE0 195 aaKnown RBP26.46■■□□□ 1.83
PACS2-208ENST00000548796 AMOTL2Q9Y2J4 779 aa26.46■■□□□ 1.83
PACS2-208ENST00000548796 CCDC61Q9Y6R9 512 aa26.45■■□□□ 1.82
PACS2-208ENST00000548796 CPSF1Q10570 1443 aaKnown RBP26.44■■□□□ 1.82
PACS2-208ENST00000548796 FYB1O15117 783 aa26.43■■□□□ 1.82
PACS2-208ENST00000548796 ANKLE2Q86XL3 938 aa26.43■■□□□ 1.82
PACS2-208ENST00000548796 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.43■■□□□ 1.82
PACS2-208ENST00000548796 KIF20BQ96Q89 1820 aa26.43■■□□□ 1.82
PACS2-208ENST00000548796 CDC42BPGQ6DT37 1551 aa26.42■■□□□ 1.82
PACS2-208ENST00000548796 TNNT2P45379 298 aaPredicted RBP26.42■■□□□ 1.82
PACS2-208ENST00000548796 MTHFSP49914 203 aa26.41■■□□□ 1.82
PACS2-208ENST00000548796 ERICH6BQ5W0A0 696 aa26.41■■□□□ 1.82
PACS2-208ENST00000548796 EDC4Q6P2E9 1401 aaKnown RBP26.41■■□□□ 1.82
PACS2-208ENST00000548796 XRN1Q8IZH2 1706 aaKnown RBP26.41■■□□□ 1.82
PACS2-208ENST00000548796 GGNBP2Q9H3C7 697 aa26.4■■□□□ 1.82
PACS2-208ENST00000548796 NGEFQ8N5V2 710 aa26.39■■□□□ 1.82
PACS2-208ENST00000548796 SENP3-EIF4A1A0A087X0R7 540 aa26.39■■□□□ 1.81
PACS2-208ENST00000548796 ZNF692Q9BU19 519 aaPredicted RBP26.39■■□□□ 1.81
PACS2-208ENST00000548796 SHPRHQ149N8 1683 aa26.38■■□□□ 1.81
PACS2-208ENST00000548796 SALL2Q9Y467 1007 aaPredicted RBP26.38■■□□□ 1.81
PACS2-208ENST00000548796 MON2Q7Z3U7 1717 aa26.36■■□□□ 1.81
PACS2-208ENST00000548796 AKAP12Q02952 1782 aa26.35■■□□□ 1.81
PACS2-208ENST00000548796 ITSN1Q15811 1721 aa26.35■■□□□ 1.81
PACS2-208ENST00000548796 TOPAZ1Q8N9V7 1692 aa26.35■■□□□ 1.81
PACS2-208ENST00000548796 PRR36Q9H6K5 1346 aa26.34■■□□□ 1.81
PACS2-208ENST00000548796 PLEKHG3A1L390 1219 aa26.32■■□□□ 1.8
PACS2-208ENST00000548796 RNF123Q5XPI4 1314 aa26.31■■□□□ 1.8
PACS2-208ENST00000548796 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.3■■□□□ 1.8
PACS2-208ENST00000548796 PELP1Q8IZL8 1130 aaKnown RBP26.3■■□□□ 1.8
PACS2-208ENST00000548796 ZNF521Q96K83 1311 aa26.29■■□□□ 1.8
PACS2-208ENST00000548796 CCDC146Q8IYE0 955 aa26.28■■□□□ 1.8
PACS2-208ENST00000548796 CHD2O14647 1828 aaKnown RBP26.27■■□□□ 1.8
PACS2-208ENST00000548796 KCNA6P17658 529 aa26.27■■□□□ 1.8
PACS2-208ENST00000548796 RUNDC1Q96C34 613 aa26.27■■□□□ 1.8
PACS2-208ENST00000548796 APAF1O14727 1248 aa26.26■■□□□ 1.79
PACS2-208ENST00000548796 NCKAP5LQ9HCH0 1330 aa26.26■■□□□ 1.79
PACS2-208ENST00000548796 NPHP4O75161 1426 aaPredicted RBP26.26■■□□□ 1.79
PACS2-208ENST00000548796 COL3A1P02461 1466 aaPredicted RBP26.25■■□□□ 1.79
PACS2-208ENST00000548796 GOLGA2Q08379 1002 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms