RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 DNAJB2P25686 324 aa12.23□□□□□ -0.45
CCDC59-203ENST00000548126 PCDHB3Q9Y5E6 796 aa12.23□□□□□ -0.45
CCDC59-203ENST00000548126 ABCC2Q92887 1545 aa12.22□□□□□ -0.45
CCDC59-203ENST00000548126 TEX14Q8IWB6 1497 aa12.22□□□□□ -0.45
CCDC59-203ENST00000548126 PTPRGP23470 1445 aa12.22□□□□□ -0.45
CCDC59-203ENST00000548126 ZPR1O75312 459 aa12.21□□□□□ -0.45
CCDC59-203ENST00000548126 P3H3Q8IVL6 736 aa12.2□□□□□ -0.46
CCDC59-203ENST00000548126 NKX2-3Q8TAU0 364 aa12.2□□□□□ -0.46
CCDC59-203ENST00000548126 MLLT3P42568 568 aaPredicted RBP12.19□□□□□ -0.46
CCDC59-203ENST00000548126 PTGDRQ13258 359 aa12.19□□□□□ -0.46
CCDC59-203ENST00000548126 KMT5BQ4FZB7 885 aa12.19□□□□□ -0.46
CCDC59-203ENST00000548126 MAP3K4Q9Y6R4 1608 aa12.19□□□□□ -0.46
CCDC59-203ENST00000548126 TTBK1Q5TCY1 1321 aaPredicted RBP12.18□□□□□ -0.46
CCDC59-203ENST00000548126 KIAA0586Q9BVV6 1533 aa12.18□□□□□ -0.46
CCDC59-203ENST00000548126 KCNV2Q8TDN2 545 aa12.18□□□□□ -0.46
CCDC59-203ENST00000548126 PDZRN3Q9UPQ7 1066 aa12.18□□□□□ -0.46
CCDC59-203ENST00000548126 EPRSP07814 1512 aaKnown RBP12.17□□□□□ -0.46
CCDC59-203ENST00000548126 NUTM2FA1L443 756 aa12.17□□□□□ -0.46
CCDC59-203ENST00000548126 TMEM134Q9H6X4 195 aa12.16□□□□□ -0.46
CCDC59-203ENST00000548126 TSHZ2Q9NRE2 1034 aa12.16□□□□□ -0.46
CCDC59-203ENST00000548126 CUL7Q14999 1698 aa12.15□□□□□ -0.46
CCDC59-203ENST00000548126 TNIKQ9UKE5 1360 aa12.14□□□□□ -0.47
CCDC59-203ENST00000548126 ADGRG1Q9Y653 693 aa12.13□□□□□ -0.47
CCDC59-203ENST00000548126 PTPRMP28827 1452 aa12.13□□□□□ -0.47
CCDC59-203ENST00000548126 BIVM-ERCC5R4GMW8 1640 aa12.12□□□□□ -0.47
CCDC59-203ENST00000548126 FCHSD2O94868 740 aa12.12□□□□□ -0.47
CCDC59-203ENST00000548126 BLOC1S3Q6QNY0 202 aa12.12□□□□□ -0.47
CCDC59-203ENST00000548126 UHRF1BP1LA0JNW5 1464 aa12.12□□□□□ -0.47
CCDC59-203ENST00000548126 ACTN4O43707 911 aaKnown RBP12.11□□□□□ -0.47
CCDC59-203ENST00000548126 RSPH4AQ5TD94 716 aa12.11□□□□□ -0.47
CCDC59-203ENST00000548126 PCF11O94913 1555 aaKnown RBP12.1□□□□□ -0.47
CCDC59-203ENST00000548126 RCCD1A6NED2 376 aa12.1□□□□□ -0.47
CCDC59-203ENST00000548126 KIF21BO75037 1637 aa12.1□□□□□ -0.47
CCDC59-203ENST00000548126 CARMIL2Q6F5E8 1435 aa12.1□□□□□ -0.47
CCDC59-203ENST00000548126 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.09□□□□□ -0.47
CCDC59-203ENST00000548126 SLC19A1P41440 591 aa12.09□□□□□ -0.47
CCDC59-203ENST00000548126 UACAQ9BZF9 1416 aa12.09□□□□□ -0.47
CCDC59-203ENST00000548126 OATP04181 439 aa12.08□□□□□ -0.48
CCDC59-203ENST00000548126 CFHP08603 1231 aa12.08□□□□□ -0.48
CCDC59-203ENST00000548126 KDM5BQ9UGL1 1544 aa12.07□□□□□ -0.48
CCDC59-203ENST00000548126 ADAMTSL3P82987 1691 aa12.07□□□□□ -0.48
CCDC59-203ENST00000548126 RNF223E7ERA6 249 aa12.07□□□□□ -0.48
CCDC59-203ENST00000548126 NR1I2O75469 434 aa12.07□□□□□ -0.48
CCDC59-203ENST00000548126 LCE2BO14633 110 aa12.06□□□□□ -0.48
CCDC59-203ENST00000548126 ANKLE1Q8NAG6 615 aa12.06□□□□□ -0.48
CCDC59-203ENST00000548126 MAGI3Q5TCQ9 1506 aa12.05□□□□□ -0.48
CCDC59-203ENST00000548126 CD109Q6YHK3 1445 aa12.04□□□□□ -0.48
CCDC59-203ENST00000548126 HSPA2P54652 639 aa12.04□□□□□ -0.48
CCDC59-203ENST00000548126 SPATA31D1Q6ZQQ2 1576 aa12.04□□□□□ -0.48
CCDC59-203ENST00000548126 SMYD5Q6GMV2 418 aa12.03□□□□□ -0.48
CCDC59-203ENST00000548126 ZCCHC11Q5TAX3 1644 aaKnown RBP12.02□□□□□ -0.49
CCDC59-203ENST00000548126 TLL1O43897 1013 aa12.02□□□□□ -0.49
CCDC59-203ENST00000548126 ADH1BP00325 375 aa12.02□□□□□ -0.49
CCDC59-203ENST00000548126 ZNF787Q6DD87 383 aa12.02□□□□□ -0.49
CCDC59-203ENST00000548126 IGF1RP08069 1367 aa12.02□□□□□ -0.49
CCDC59-203ENST00000548126 HIC1Q14526 733 aa12.01□□□□□ -0.49
CCDC59-203ENST00000548126 ZNF598Q86UK7 904 aaKnown RBP12.01□□□□□ -0.49
CCDC59-203ENST00000548126 WDR7Q9Y4E6 1490 aa12.01□□□□□ -0.49
CCDC59-203ENST00000548126 FAM161AQ3B820 660 aa12□□□□□ -0.49
CCDC59-203ENST00000548126 PKDCCQ504Y2 493 aa12□□□□□ -0.49
CCDC59-203ENST00000548126 SPRYD7Q5W111 196 aa12□□□□□ -0.49
CCDC59-203ENST00000548126 S1PR4O95977 384 aa11.99□□□□□ -0.49
CCDC59-203ENST00000548126 CFAP43Q8NDM7 1665 aa11.99□□□□□ -0.49
CCDC59-203ENST00000548126 ARAP3Q8WWN8 1544 aa11.98□□□□□ -0.49
CCDC59-203ENST00000548126 SEMA3EO15041 775 aa11.98□□□□□ -0.49
CCDC59-203ENST00000548126 PXYLP1Q8TE99 480 aa11.98□□□□□ -0.49
CCDC59-203ENST00000548126 SLC6A16Q9GZN6 736 aa11.98□□□□□ -0.49
CCDC59-203ENST00000548126 DGAT1O75907 488 aa11.97□□□□□ -0.49
CCDC59-203ENST00000548126 SLC10A3P09131 477 aa11.97□□□□□ -0.49
CCDC59-203ENST00000548126 PRR20EP86478 221 aa11.97□□□□□ -0.49
CCDC59-203ENST00000548126 PRR20CP86479 221 aa11.97□□□□□ -0.49
CCDC59-203ENST00000548126 PRR20DP86480 221 aa11.97□□□□□ -0.49
CCDC59-203ENST00000548126 PRR20BP86481 221 aa11.97□□□□□ -0.49
CCDC59-203ENST00000548126 PRR20AP86496 221 aa11.97□□□□□ -0.49
CCDC59-203ENST00000548126 BCORL1Q5H9F3 1711 aa11.97□□□□□ -0.49
CCDC59-203ENST00000548126 MADDQ8WXG6 1647 aa11.97□□□□□ -0.49
CCDC59-203ENST00000548126 ARID4BQ4LE39 1312 aaPredicted RBP11.96□□□□□ -0.49
CCDC59-203ENST00000548126 ZNF697Q5TEC3 545 aa11.95□□□□□ -0.5
CCDC59-203ENST00000548126 DISP1Q96F81 1524 aa11.95□□□□□ -0.5
CCDC59-203ENST00000548126 METTL3Q86U44 580 aaKnown RBP11.94□□□□□ -0.5
CCDC59-203ENST00000548126 IQGAP2Q13576 1575 aa11.93□□□□□ -0.5
CCDC59-203ENST00000548126 PPEF1O14829 653 aaPredicted RBP11.93□□□□□ -0.5
CCDC59-203ENST00000548126 TRIM67Q6ZTA4 783 aa11.93□□□□□ -0.5
CCDC59-203ENST00000548126 SCUBE3Q8IX30 993 aa11.93□□□□□ -0.5
CCDC59-203ENST00000548126 CARMIL1Q5VZK9 1371 aa11.92□□□□□ -0.5
CCDC59-203ENST00000548126 GNPATO15228 680 aa11.91□□□□□ -0.5
CCDC59-203ENST00000548126 RAPGEF3O95398 923 aa11.91□□□□□ -0.5
CCDC59-203ENST00000548126 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
CCDC59-203ENST00000548126 SPSB2Q99619 263 aa11.91□□□□□ -0.5
CCDC59-203ENST00000548126 PHLDB1Q86UU1 1377 aa11.91□□□□□ -0.5
CCDC59-203ENST00000548126 RIMS1Q86UR5 1692 aaKnown RBP11.91□□□□□ -0.5
CCDC59-203ENST00000548126 KIF27Q86VH2 1401 aa11.9□□□□□ -0.5
CCDC59-203ENST00000548126 RDH13Q8NBN7 331 aa11.9□□□□□ -0.5
CCDC59-203ENST00000548126 EMID1Q96A84 441 aaPredicted RBP11.9□□□□□ -0.5
CCDC59-203ENST00000548126 TESPA1A2RU30 521 aaPredicted RBP11.89□□□□□ -0.51
CCDC59-203ENST00000548126 LMOD2Q6P5Q4 547 aa11.89□□□□□ -0.51
CCDC59-203ENST00000548126 DAXXQ9UER7 740 aaPredicted RBP11.89□□□□□ -0.51
CCDC59-203ENST00000548126 SULF1Q8IWU6 871 aa11.88□□□□□ -0.51
CCDC59-203ENST00000548126 FAM187AA6NFU0 413 aa11.87□□□□□ -0.51
CCDC59-203ENST00000548126 MYT1Q01538 1121 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 467.5 ms