RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 PRAG1Q86YV5 1406 aa13.66□□□□□ -0.22
AC055716.3-201ENST00000547533 COL22A1Q8NFW1 1626 aaPredicted RBP13.66□□□□□ -0.22
AC055716.3-201ENST00000547533 MARF1Q9Y4F3 1742 aaKnown RBP13.66□□□□□ -0.22
AC055716.3-201ENST00000547533 ROBO2Q9HCK4 1378 aa13.66□□□□□ -0.22
AC055716.3-201ENST00000547533 ESCO1Q5FWF5 840 aa13.65□□□□□ -0.22
AC055716.3-201ENST00000547533 ORAI2Q96SN7 254 aa13.65□□□□□ -0.22
AC055716.3-201ENST00000547533 CDC42BPGQ6DT37 1551 aa13.65□□□□□ -0.22
AC055716.3-201ENST00000547533 CCDC144AA2RUR9 1427 aa13.64□□□□□ -0.23
AC055716.3-201ENST00000547533 ANKRD30BQ9BXX2 1392 aa13.61□□□□□ -0.23
AC055716.3-201ENST00000547533 KIF1AQ12756 1690 aa13.61□□□□□ -0.23
AC055716.3-201ENST00000547533 CCDC125Q86Z20 511 aa13.61□□□□□ -0.23
AC055716.3-201ENST00000547533 FNBP4Q8N3X1 1017 aaPredicted RBP13.61□□□□□ -0.23
AC055716.3-201ENST00000547533 ACIN1Q9UKV3 1341 aaKnown RBP13.61□□□□□ -0.23
AC055716.3-201ENST00000547533 KNDC1Q76NI1 1749 aa13.6□□□□□ -0.23
AC055716.3-201ENST00000547533 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
AC055716.3-201ENST00000547533 ATRNO75882 1429 aa13.59□□□□□ -0.23
AC055716.3-201ENST00000547533 IFT172Q9UG01 1749 aa13.59□□□□□ -0.23
AC055716.3-201ENST00000547533 FOXO3O43524 673 aa13.58□□□□□ -0.24
AC055716.3-201ENST00000547533 HAP1P54257 671 aaPredicted RBP13.58□□□□□ -0.24
AC055716.3-201ENST00000547533 RGL3Q3MIN7 710 aa13.58□□□□□ -0.24
AC055716.3-201ENST00000547533 STK26Q9P289 416 aa13.58□□□□□ -0.24
AC055716.3-201ENST00000547533 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.58□□□□□ -0.24
AC055716.3-201ENST00000547533 MYOM2P54296 1465 aa13.57□□□□□ -0.24
AC055716.3-201ENST00000547533 PXDNQ92626 1479 aa13.57□□□□□ -0.24
AC055716.3-201ENST00000547533 TECPR2O15040 1411 aa13.56□□□□□ -0.24
AC055716.3-201ENST00000547533 FMN2Q9NZ56 1722 aa13.56□□□□□ -0.24
AC055716.3-201ENST00000547533 PSME1Q06323 249 aa13.56□□□□□ -0.24
AC055716.3-201ENST00000547533 XPCQ01831 940 aaPredicted RBP13.55□□□□□ -0.24
AC055716.3-201ENST00000547533 GJD4Q96KN9 370 aaPredicted RBP13.55□□□□□ -0.24
AC055716.3-201ENST00000547533 ABCC11Q96J66 1382 aa13.55□□□□□ -0.24
AC055716.3-201ENST00000547533 NUTM2FA1L443 756 aa13.54□□□□□ -0.24
AC055716.3-201ENST00000547533 SF3B2Q13435 895 aaKnown RBP13.54□□□□□ -0.24
AC055716.3-201ENST00000547533 ADGRF5Q8IZF2 1346 aa13.54□□□□□ -0.24
AC055716.3-201ENST00000547533 WAPLQ7Z5K2 1190 aa13.53□□□□□ -0.24
AC055716.3-201ENST00000547533 UNC5CLQ8IV45 518 aa13.53□□□□□ -0.24
AC055716.3-201ENST00000547533 BCL9LQ86UU0 1499 aa13.53□□□□□ -0.24
AC055716.3-201ENST00000547533 MPHOSPH9Q99550 1183 aa13.52□□□□□ -0.25
AC055716.3-201ENST00000547533 DHX57Q6P158 1386 aaKnown RBP13.52□□□□□ -0.25
AC055716.3-201ENST00000547533 PIK3C2GO75747 1445 aa13.52□□□□□ -0.25
AC055716.3-201ENST00000547533 SPATA31E1Q6ZUB1 1445 aa13.52□□□□□ -0.25
AC055716.3-201ENST00000547533 YTHDC2Q9H6S0 1430 aaKnown RBP13.52□□□□□ -0.25
AC055716.3-201ENST00000547533 RGPD8O14715 1765 aaPredicted RBP13.51□□□□□ -0.25
AC055716.3-201ENST00000547533 USP32Q8NFA0 1604 aa13.51□□□□□ -0.25
AC055716.3-201ENST00000547533 SPATA31A3Q5VYP0 1347 aa13.51□□□□□ -0.25
AC055716.3-201ENST00000547533 TMEM132EQ6IEE7 984 aa13.51□□□□□ -0.25
AC055716.3-201ENST00000547533 KRT28Q7Z3Y7 464 aa13.51□□□□□ -0.25
AC055716.3-201ENST00000547533 SIRT1Q96EB6 747 aa13.51□□□□□ -0.25
AC055716.3-201ENST00000547533 NWD2Q9ULI1 1742 aa13.5□□□□□ -0.25
AC055716.3-201ENST00000547533 CCDC9Q9Y3X0 531 aaKnown RBP13.5□□□□□ -0.25
AC055716.3-201ENST00000547533 BLMP54132 1417 aaPredicted RBP13.49□□□□□ -0.25
AC055716.3-201ENST00000547533 ARHGEF10O15013 1369 aa13.49□□□□□ -0.25
AC055716.3-201ENST00000547533 LMOD2Q6P5Q4 547 aa13.49□□□□□ -0.25
AC055716.3-201ENST00000547533 PHF8Q9UPP1 1060 aa13.49□□□□□ -0.25
AC055716.3-201ENST00000547533 RALGAPBQ86X10 1494 aa13.48□□□□□ -0.25
AC055716.3-201ENST00000547533 TNS3Q68CZ2 1445 aa13.48□□□□□ -0.25
AC055716.3-201ENST00000547533 PLCH1Q4KWH8 1693 aa13.48□□□□□ -0.25
AC055716.3-201ENST00000547533 POGKQ9P215 609 aa13.48□□□□□ -0.25
AC055716.3-201ENST00000547533 SLIT2O94813 1529 aa13.48□□□□□ -0.25
AC055716.3-201ENST00000547533 PLEKHH1Q9ULM0 1364 aa13.47□□□□□ -0.25
AC055716.3-201ENST00000547533 BRWD3Q6RI45 1802 aa13.47□□□□□ -0.25
AC055716.3-201ENST00000547533 SBNO1A3KN83 1393 aa13.46□□□□□ -0.25
AC055716.3-201ENST00000547533 EIF3AQ14152 1382 aaKnown RBP13.46□□□□□ -0.25
AC055716.3-201ENST00000547533 GLI3P10071 1580 aa13.46□□□□□ -0.25
AC055716.3-201ENST00000547533 EP400Q96L91 3159 aa13.46□□□□□ -0.25
AC055716.3-201ENST00000547533 A0A0G2JS52 829 aa13.46□□□□□ -0.25
AC055716.3-201ENST00000547533 MYT1Q01538 1121 aa13.46□□□□□ -0.25
AC055716.3-201ENST00000547533 C14orf93Q9H972 538 aaKnown RBP13.46□□□□□ -0.25
AC055716.3-201ENST00000547533 NRXN1Q9ULB1 1477 aa13.45□□□□□ -0.26
AC055716.3-201ENST00000547533 VPS72Q15906 364 aa13.45□□□□□ -0.26
AC055716.3-201ENST00000547533 ABCA3Q99758 1704 aa13.44□□□□□ -0.26
AC055716.3-201ENST00000547533 PLEKHG5O94827 1062 aa13.44□□□□□ -0.26
AC055716.3-201ENST00000547533 SEPT12Q8IYM1 358 aa13.44□□□□□ -0.26
AC055716.3-201ENST00000547533 PRAM1Q96QH2 718 aa13.44□□□□□ -0.26
AC055716.3-201ENST00000547533 ANKARQ7Z5J8 1434 aa13.44□□□□□ -0.26
AC055716.3-201ENST00000547533 GPRASP1Q5JY77 1395 aa13.44□□□□□ -0.26
AC055716.3-201ENST00000547533 SAFB2Q14151 953 aaKnown RBP eCLIP13.43□□□□□ -0.26
AC055716.3-201ENST00000547533 DLC1Q96QB1 1528 aa13.43□□□□□ -0.26
AC055716.3-201ENST00000547533 CFAP70Q5T0N1 1121 aa13.42□□□□□ -0.26
AC055716.3-201ENST00000547533 KRT27Q7Z3Y8 459 aa13.42□□□□□ -0.26
AC055716.3-201ENST00000547533 BAG6P46379 1132 aa13.41□□□□□ -0.26
AC055716.3-201ENST00000547533 CABLES1Q8TDN4 633 aa13.41□□□□□ -0.26
AC055716.3-201ENST00000547533 ADGRB2O60241 1585 aa13.41□□□□□ -0.26
AC055716.3-201ENST00000547533 COL14A1Q05707 1796 aaKnown RBP13.4□□□□□ -0.26
AC055716.3-201ENST00000547533 ITSN1Q15811 1721 aa13.4□□□□□ -0.26
AC055716.3-201ENST00000547533 PMFBP1Q8TBY8 1022 aa13.39□□□□□ -0.27
AC055716.3-201ENST00000547533 STAC3Q96MF2 364 aa13.39□□□□□ -0.27
AC055716.3-201ENST00000547533 ONECUT3O60422 494 aaPredicted RBP13.38□□□□□ -0.27
AC055716.3-201ENST00000547533 RGPD1P0DJD0 1748 aa13.38□□□□□ -0.27
AC055716.3-201ENST00000547533 NRAPQ86VF7 1730 aa13.37□□□□□ -0.27
AC055716.3-201ENST00000547533 TRPM3Q9HCF6 1732 aaPredicted RBP13.37□□□□□ -0.27
AC055716.3-201ENST00000547533 DEFB132Q7Z7B7 95 aa13.37□□□□□ -0.27
AC055716.3-201ENST00000547533 NGDNQ8NEJ9 315 aaKnown RBP13.37□□□□□ -0.27
AC055716.3-201ENST00000547533 BTG4Q9NY30 223 aa13.37□□□□□ -0.27
AC055716.3-201ENST00000547533 TRAK1Q9UPV9 953 aa13.37□□□□□ -0.27
AC055716.3-201ENST00000547533 SRCAPQ6ZRS2 3230 aa13.36□□□□□ -0.27
AC055716.3-201ENST00000547533 LRP5O75197 1615 aa13.36□□□□□ -0.27
AC055716.3-201ENST00000547533 TULP4Q9NRJ4 1543 aa13.36□□□□□ -0.27
AC055716.3-201ENST00000547533 FAM83GA6ND36 823 aa13.36□□□□□ -0.27
AC055716.3-201ENST00000547533 PAK3O75914 559 aaPredicted RBP13.36□□□□□ -0.27
AC055716.3-201ENST00000547533 ALS2Q96Q42 1657 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms