RNA–Protein interactions for RNA: ENST00000545668.5

DDX11-229, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-229ENST00000545668 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
DDX11-229ENST00000545668 SETBP1Q9Y6X0 1596 aa12.7□□□□□ -0.38
DDX11-229ENST00000545668 SIGLEC1Q9BZZ2 1709 aa12.7□□□□□ -0.38
DDX11-229ENST00000545668 PPLO60437 1756 aa12.7□□□□□ -0.38
DDX11-229ENST00000545668 RRP1P56182 461 aaKnown RBP12.69□□□□□ -0.38
DDX11-229ENST00000545668 BRPF3Q9ULD4 1205 aa12.69□□□□□ -0.38
DDX11-229ENST00000545668 NPC1L1Q9UHC9 1359 aa12.69□□□□□ -0.38
DDX11-229ENST00000545668 PDE4AP27815 886 aa12.68□□□□□ -0.38
DDX11-229ENST00000545668 CANXP27824 592 aaKnown RBP12.68□□□□□ -0.38
DDX11-229ENST00000545668 ESF1Q9H501 851 aaKnown RBP12.68□□□□□ -0.38
DDX11-229ENST00000545668 EVC2Q86UK5 1308 aa12.68□□□□□ -0.38
DDX11-229ENST00000545668 TNNT2P45379 298 aaPredicted RBP12.68□□□□□ -0.38
DDX11-229ENST00000545668 RNF123Q5XPI4 1314 aa12.68□□□□□ -0.38
DDX11-229ENST00000545668 ZC3H13Q5T200 1668 aaKnown RBP12.67□□□□□ -0.38
DDX11-229ENST00000545668 BLMP54132 1417 aaPredicted RBP12.67□□□□□ -0.38
DDX11-229ENST00000545668 ADGRB1O14514 1584 aa12.67□□□□□ -0.38
DDX11-229ENST00000545668 INSRP06213 1382 aa12.67□□□□□ -0.38
DDX11-229ENST00000545668 MORC1Q86VD1 984 aa12.67□□□□□ -0.38
DDX11-229ENST00000545668 ZMYM4Q5VZL5 1548 aa12.66□□□□□ -0.38
DDX11-229ENST00000545668 MYOM1P52179 1685 aa12.66□□□□□ -0.38
DDX11-229ENST00000545668 PIK3C2BO00750 1634 aa12.66□□□□□ -0.38
DDX11-229ENST00000545668 UBE2Q2Q8WVN8 375 aa12.66□□□□□ -0.38
DDX11-229ENST00000545668 NEXMIFQ5QGS0 1516 aa12.66□□□□□ -0.38
DDX11-229ENST00000545668 PPP6R1Q9UPN7 881 aa12.66□□□□□ -0.38
DDX11-229ENST00000545668 CABP2Q9NPB3 220 aa12.65□□□□□ -0.38
DDX11-229ENST00000545668 PODXL2Q9NZ53 605 aa12.65□□□□□ -0.38
DDX11-229ENST00000545668 POGKQ9P215 609 aa12.65□□□□□ -0.38
DDX11-229ENST00000545668 NSD3Q9BZ95 1437 aa12.65□□□□□ -0.38
DDX11-229ENST00000545668 SRPK2P78362 688 aaKnown RBP12.65□□□□□ -0.38
DDX11-229ENST00000545668 CCDC146Q8IYE0 955 aa12.65□□□□□ -0.38
DDX11-229ENST00000545668 NEUROD2Q15784 382 aa12.64□□□□□ -0.39
DDX11-229ENST00000545668 MYO3AQ8NEV4 1616 aa12.64□□□□□ -0.39
DDX11-229ENST00000545668 NAP1L5Q96NT1 182 aaPredicted RBP12.64□□□□□ -0.39
DDX11-229ENST00000545668 CRBNQ96SW2 442 aa12.64□□□□□ -0.39
DDX11-229ENST00000545668 TCERG1O14776 1098 aaKnown RBP12.63□□□□□ -0.39
DDX11-229ENST00000545668 CGNL1Q0VF96 1302 aa12.63□□□□□ -0.39
DDX11-229ENST00000545668 ZFYVE9O95405 1425 aa12.63□□□□□ -0.39
DDX11-229ENST00000545668 QRICH2Q9H0J4 1663 aa12.62□□□□□ -0.39
DDX11-229ENST00000545668 PREX1Q8TCU6 1659 aa12.62□□□□□ -0.39
DDX11-229ENST00000545668 MINK1Q8N4C8 1332 aaPredicted RBP12.62□□□□□ -0.39
DDX11-229ENST00000545668 PRAM1Q96QH2 718 aa12.62□□□□□ -0.39
DDX11-229ENST00000545668 APAF1O14727 1248 aa12.61□□□□□ -0.39
DDX11-229ENST00000545668 GOLGA2Q08379 1002 aa12.6□□□□□ -0.39
DDX11-229ENST00000545668 PUS7Q96PZ0 661 aaKnown RBP12.6□□□□□ -0.39
DDX11-229ENST00000545668 ARID3AQ99856 593 aa12.6□□□□□ -0.39
DDX11-229ENST00000545668 PLEKHH1Q9ULM0 1364 aa12.59□□□□□ -0.39
DDX11-229ENST00000545668 TMEM131LA2VDJ0 1609 aa12.59□□□□□ -0.39
DDX11-229ENST00000545668 AGLP35573 1532 aa12.59□□□□□ -0.39
DDX11-229ENST00000545668 YTHDC2Q9H6S0 1430 aaKnown RBP12.58□□□□□ -0.4
DDX11-229ENST00000545668 CFAP53Q96M91 514 aa12.57□□□□□ -0.4
DDX11-229ENST00000545668 ANKRD36BQ8N2N9 1353 aa12.57□□□□□ -0.4
DDX11-229ENST00000545668 MYO5BQ9ULV0 1848 aa12.57□□□□□ -0.4
DDX11-229ENST00000545668 MTHFSP49914 203 aa12.57□□□□□ -0.4
DDX11-229ENST00000545668 FRAT1Q92837 279 aaPredicted RBP12.56□□□□□ -0.4
DDX11-229ENST00000545668 TULP4Q9NRJ4 1543 aa12.56□□□□□ -0.4
DDX11-229ENST00000545668 POLR3AO14802 1390 aaPredicted RBP12.56□□□□□ -0.4
DDX11-229ENST00000545668 PPM1GO15355 546 aaPredicted RBP12.56□□□□□ -0.4
DDX11-229ENST00000545668 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.56□□□□□ -0.4
DDX11-229ENST00000545668 TERF2IPQ9NYB0 399 aa12.56□□□□□ -0.4
DDX11-229ENST00000545668 REREQ9P2R6 1566 aa12.56□□□□□ -0.4
DDX11-229ENST00000545668 CLTCQ00610 1675 aaKnown RBP12.56□□□□□ -0.4
DDX11-229ENST00000545668 C20orf194Q5TEA3 1177 aa12.56□□□□□ -0.4
DDX11-229ENST00000545668 ARHGEF28Q8N1W1 1705 aaKnown RBP12.55□□□□□ -0.4
DDX11-229ENST00000545668 DUSP27Q5VZP5 1158 aa12.55□□□□□ -0.4
DDX11-229ENST00000545668 ZMYM3Q14202 1370 aa12.55□□□□□ -0.4
DDX11-229ENST00000545668 DDRGK1Q96HY6 314 aa12.55□□□□□ -0.4
DDX11-229ENST00000545668 RIMS2Q9UQ26 1411 aa12.54□□□□□ -0.4
DDX11-229ENST00000545668 CDK19Q9BWU1 502 aa12.54□□□□□ -0.4
DDX11-229ENST00000545668 ZNF521Q96K83 1311 aa12.54□□□□□ -0.4
DDX11-229ENST00000545668 ATAD2Q6PL18 1390 aa12.54□□□□□ -0.4
DDX11-229ENST00000545668 GGNBP2Q9H3C7 697 aa12.54□□□□□ -0.4
DDX11-229ENST00000545668 SLFN5Q08AF3 891 aa12.53□□□□□ -0.4
DDX11-229ENST00000545668 WAPLQ7Z5K2 1190 aa12.53□□□□□ -0.4
DDX11-229ENST00000545668 A2ML1A8K2U0 1454 aa12.53□□□□□ -0.4
DDX11-229ENST00000545668 A0A1W2PP64 1363 aa12.53□□□□□ -0.4
DDX11-229ENST00000545668 HDGFL2Q7Z4V5 671 aaPredicted RBP12.53□□□□□ -0.4
DDX11-229ENST00000545668 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.53□□□□□ -0.4
DDX11-229ENST00000545668 NINLQ9Y2I6 1382 aa12.53□□□□□ -0.4
DDX11-229ENST00000545668 HDGFP51858 240 aaKnown RBP12.53□□□□□ -0.4
DDX11-229ENST00000545668 BACH2Q9BYV9 841 aa12.53□□□□□ -0.4
DDX11-229ENST00000545668 ALKQ9UM73 1620 aa12.53□□□□□ -0.4
DDX11-229ENST00000545668 PTPRMP28827 1452 aa12.52□□□□□ -0.4
DDX11-229ENST00000545668 NSD2O96028 1365 aa12.52□□□□□ -0.41
DDX11-229ENST00000545668 NGEFQ8N5V2 710 aa12.52□□□□□ -0.41
DDX11-229ENST00000545668 CABP1Q9NZU7 370 aa12.52□□□□□ -0.41
DDX11-229ENST00000545668 ARHGEF40Q8TER5 1519 aa12.52□□□□□ -0.41
DDX11-229ENST00000545668 E9PSI1 815 aa12.51□□□□□ -0.41
DDX11-229ENST00000545668 RRP7AQ9Y3A4 280 aaKnown RBP12.51□□□□□ -0.41
DDX11-229ENST00000545668 U2AF1L5P0DN76 240 aaPredicted RBP12.51□□□□□ -0.41
DDX11-229ENST00000545668 U2AF1Q01081 240 aaKnown RBP eCLIP12.51□□□□□ -0.41
DDX11-229ENST00000545668 RUNDC1Q96C34 613 aa12.51□□□□□ -0.41
DDX11-229ENST00000545668 SPINK5Q9NQ38 1064 aaPredicted RBP12.51□□□□□ -0.41
DDX11-229ENST00000545668 SPATA31D1Q6ZQQ2 1576 aa12.51□□□□□ -0.41
DDX11-229ENST00000545668 PLPPR3Q6T4P5 718 aa12.5□□□□□ -0.41
DDX11-229ENST00000545668 KIF13AQ9H1H9 1805 aa12.5□□□□□ -0.41
DDX11-229ENST00000545668 TCP11L2Q8N4U5 519 aa12.49□□□□□ -0.41
DDX11-229ENST00000545668 SPRYD3Q8NCJ5 442 aa12.49□□□□□ -0.41
DDX11-229ENST00000545668 WWC1Q8IX03 1113 aa12.49□□□□□ -0.41
DDX11-229ENST00000545668 ABCC11Q96J66 1382 aa12.49□□□□□ -0.41
DDX11-229ENST00000545668 U2SURPO15042 1029 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms