RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 NINLQ9Y2I6 1382 aa23.28■■□□□ 1.32
SCARB1-208ENST00000544327 RIMBP3CA6NJZ7 1639 aa23.28■■□□□ 1.32
SCARB1-208ENST00000544327 RIMBP3BA6NNM3 1639 aa23.28■■□□□ 1.32
SCARB1-208ENST00000544327 RIMBP3Q9UFD9 1639 aa23.28■■□□□ 1.32
SCARB1-208ENST00000544327 MORC1Q86VD1 984 aa23.28■■□□□ 1.32
SCARB1-208ENST00000544327 NKTRP30414 1462 aaKnown RBP23.27■■□□□ 1.32
SCARB1-208ENST00000544327 APAF1O14727 1248 aa23.27■■□□□ 1.32
SCARB1-208ENST00000544327 CCDC146Q8IYE0 955 aa23.27■■□□□ 1.32
SCARB1-208ENST00000544327 CGNL1Q0VF96 1302 aa23.27■■□□□ 1.32
SCARB1-208ENST00000544327 CLTCQ00610 1675 aaKnown RBP23.26■■□□□ 1.31
SCARB1-208ENST00000544327 E9PSI1 815 aa23.25■■□□□ 1.31
SCARB1-208ENST00000544327 MS4A1P11836 297 aa23.24■■□□□ 1.31
SCARB1-208ENST00000544327 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.24■■□□□ 1.31
SCARB1-208ENST00000544327 PPP6R1Q9UPN7 881 aa23.24■■□□□ 1.31
SCARB1-208ENST00000544327 PTPRMP28827 1452 aa23.24■■□□□ 1.31
SCARB1-208ENST00000544327 IQSEC2Q5JU85 1478 aa23.23■■□□□ 1.31
SCARB1-208ENST00000544327 CYB5RLQ6IPT4 315 aa23.22■■□□□ 1.31
SCARB1-208ENST00000544327 NUTM2DQ5VT03 806 aaPredicted RBP23.21■■□□□ 1.31
SCARB1-208ENST00000544327 C20orf194Q5TEA3 1177 aa23.2■■□□□ 1.3
SCARB1-208ENST00000544327 NCBP3Q53F19 620 aaKnown RBP23.19■■□□□ 1.3
SCARB1-208ENST00000544327 FAM69CQ0P6D2 419 aa23.19■■□□□ 1.3
SCARB1-208ENST00000544327 SPINK5Q9NQ38 1064 aaPredicted RBP23.19■■□□□ 1.3
SCARB1-208ENST00000544327 YTHDC2Q9H6S0 1430 aaKnown RBP23.18■■□□□ 1.3
SCARB1-208ENST00000544327 ALKQ9UM73 1620 aa23.18■■□□□ 1.3
SCARB1-208ENST00000544327 ERICH6Q7L0X2 663 aa23.17■■□□□ 1.3
SCARB1-208ENST00000544327 RUNDC1Q96C34 613 aa23.17■■□□□ 1.3
SCARB1-208ENST00000544327 KDM2BQ8NHM5 1336 aa23.17■■□□□ 1.3
SCARB1-208ENST00000544327 ABCC11Q96J66 1382 aa23.17■■□□□ 1.3
SCARB1-208ENST00000544327 SPATA31D1Q6ZQQ2 1576 aa23.17■■□□□ 1.3
SCARB1-208ENST00000544327 ATAD2Q6PL18 1390 aa23.17■■□□□ 1.3
SCARB1-208ENST00000544327 ANKRD26Q9UPS8 1709 aa23.16■■□□□ 1.3
SCARB1-208ENST00000544327 PHF23Q9BUL5 403 aaPredicted RBP23.16■■□□□ 1.3
SCARB1-208ENST00000544327 MED14O60244 1454 aa23.15■■□□□ 1.3
SCARB1-208ENST00000544327 CFAP53Q96M91 514 aa23.15■■□□□ 1.3
SCARB1-208ENST00000544327 WWC1Q8IX03 1113 aa23.15■■□□□ 1.3
SCARB1-208ENST00000544327 ANP32AP39687 249 aaKnown RBP23.14■■□□□ 1.29
SCARB1-208ENST00000544327 CABP2Q9NPB3 220 aa23.14■■□□□ 1.29
SCARB1-208ENST00000544327 MTHFSP49914 203 aa23.13■■□□□ 1.29
SCARB1-208ENST00000544327 DLC1Q96QB1 1528 aa23.13■■□□□ 1.29
SCARB1-208ENST00000544327 A0A1W2PP64 1363 aa23.13■■□□□ 1.29
SCARB1-208ENST00000544327 CCDC27Q2M243 656 aa23.12■■□□□ 1.29
SCARB1-208ENST00000544327 CENPQQ7L2Z9 268 aaPredicted RBP23.12■■□□□ 1.29
SCARB1-208ENST00000544327 TSPOAP1O95153 1857 aa23.12■■□□□ 1.29
SCARB1-208ENST00000544327 DMRT2Q9Y5R5 561 aa23.12■■□□□ 1.29
SCARB1-208ENST00000544327 ADGRB2O60241 1585 aa23.11■■□□□ 1.29
SCARB1-208ENST00000544327 FBXO31Q5XUX0 539 aaPredicted RBP23.11■■□□□ 1.29
SCARB1-208ENST00000544327 NOP58Q9Y2X3 529 aaKnown RBP23.11■■□□□ 1.29
SCARB1-208ENST00000544327 PDE4AP27815 886 aa23.1■■□□□ 1.29
SCARB1-208ENST00000544327 IPO9Q96P70 1041 aaKnown RBP23.1■■□□□ 1.29
SCARB1-208ENST00000544327 BACH2Q9BYV9 841 aa23.1■■□□□ 1.29
SCARB1-208ENST00000544327 CD163L1Q9NR16 1453 aa23.1■■□□□ 1.29
SCARB1-208ENST00000544327 A2ML1A8K2U0 1454 aa23.09■■□□□ 1.29
SCARB1-208ENST00000544327 SETD1AO15047 1707 aaKnown RBP23.09■■□□□ 1.29
SCARB1-208ENST00000544327 WDR63Q8IWG1 891 aa23.09■■□□□ 1.29
SCARB1-208ENST00000544327 ARHGEF40Q8TER5 1519 aa23.09■■□□□ 1.29
SCARB1-208ENST00000544327 TNNT2P45379 298 aaPredicted RBP23.08■■□□□ 1.29
SCARB1-208ENST00000544327 STK26Q9P289 416 aa23.08■■□□□ 1.28
SCARB1-208ENST00000544327 NLRP1Q9C000 1473 aa23.08■■□□□ 1.28
SCARB1-208ENST00000544327 TCP11L2Q8N4U5 519 aa23.07■■□□□ 1.28
SCARB1-208ENST00000544327 PRAM1Q96QH2 718 aa23.07■■□□□ 1.28
SCARB1-208ENST00000544327 COL3A1P02461 1466 aaPredicted RBP23.06■■□□□ 1.28
SCARB1-208ENST00000544327 SRPK2P78362 688 aaKnown RBP23.06■■□□□ 1.28
SCARB1-208ENST00000544327 PDE3AQ14432 1141 aa23.05■■□□□ 1.28
SCARB1-208ENST00000544327 TERF2IPQ9NYB0 399 aa23.05■■□□□ 1.28
SCARB1-208ENST00000544327 BCAR3O75815 825 aa23.04■■□□□ 1.28
SCARB1-208ENST00000544327 SAFB2Q14151 953 aaKnown RBP eCLIP23.04■■□□□ 1.28
SCARB1-208ENST00000544327 POGKQ9P215 609 aa23.04■■□□□ 1.28
SCARB1-208ENST00000544327 RIMS2Q9UQ26 1411 aa23.03■■□□□ 1.28
SCARB1-208ENST00000544327 KIF20BQ96Q89 1820 aa23.02■■□□□ 1.28
SCARB1-208ENST00000544327 MINK1Q8N4C8 1332 aaPredicted RBP23.02■■□□□ 1.28
SCARB1-208ENST00000544327 STAG3Q9UJ98 1225 aa23.01■■□□□ 1.27
SCARB1-208ENST00000544327 FYB1O15117 783 aa22.98■■□□□ 1.27
SCARB1-208ENST00000544327 ATP7BP35670 1465 aa22.98■■□□□ 1.27
SCARB1-208ENST00000544327 NRXN3Q9Y4C0 1643 aa22.98■■□□□ 1.27
SCARB1-208ENST00000544327 KIF13AQ9H1H9 1805 aa22.97■■□□□ 1.27
SCARB1-208ENST00000544327 PAK3O75914 559 aaPredicted RBP22.97■■□□□ 1.27
SCARB1-208ENST00000544327 HDGFL2Q7Z4V5 671 aaPredicted RBP22.97■■□□□ 1.27
SCARB1-208ENST00000544327 CDK19Q9BWU1 502 aa22.97■■□□□ 1.27
SCARB1-208ENST00000544327 RRP7AQ9Y3A4 280 aaKnown RBP22.97■■□□□ 1.27
SCARB1-208ENST00000544327 U2AF1L5P0DN76 240 aaPredicted RBP22.96■■□□□ 1.27
SCARB1-208ENST00000544327 U2AF1Q01081 240 aaKnown RBP eCLIP22.96■■□□□ 1.27
SCARB1-208ENST00000544327 PNPLA6Q8IY17 1366 aa22.96■■□□□ 1.27
SCARB1-208ENST00000544327 RARSP54136 660 aaKnown RBP22.96■■□□□ 1.27
SCARB1-208ENST00000544327 AAMPQ13685 434 aa22.96■■□□□ 1.27
SCARB1-208ENST00000544327 CDC42BPGQ6DT37 1551 aa22.96■■□□□ 1.27
SCARB1-208ENST00000544327 GGNBP2Q9H3C7 697 aa22.95■■□□□ 1.26
SCARB1-208ENST00000544327 MYH16Q9H6N6 1097 aa22.95■■□□□ 1.26
SCARB1-208ENST00000544327 ZBTB47Q9UFB7 747 aaPredicted RBP22.95■■□□□ 1.26
SCARB1-208ENST00000544327 KNDC1Q76NI1 1749 aa22.95■■□□□ 1.26
SCARB1-208ENST00000544327 NEUROD2Q15784 382 aa22.94■■□□□ 1.26
SCARB1-208ENST00000544327 PLEKHF1Q96S99 279 aa22.94■■□□□ 1.26
SCARB1-208ENST00000544327 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.92■■□□□ 1.26
SCARB1-208ENST00000544327 CT47B1P0C2W7 299 aaPredicted RBP22.92■■□□□ 1.26
SCARB1-208ENST00000544327 SKAP1Q86WV1 359 aa22.91■■□□□ 1.26
SCARB1-208ENST00000544327 CABP1Q9NZU7 370 aa22.89■■□□□ 1.26
SCARB1-208ENST00000544327 TECPR2O15040 1411 aa22.89■■□□□ 1.25
SCARB1-208ENST00000544327 CLUAP1Q96AJ1 413 aa22.89■■□□□ 1.25
SCARB1-208ENST00000544327 SENP3Q9H4L4 574 aaPredicted RBP22.89■■□□□ 1.25
SCARB1-208ENST00000544327 CANXP27824 592 aaKnown RBP22.88■■□□□ 1.25
SCARB1-208ENST00000544327 SIRT1Q96EB6 747 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms