RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 CADPS2Q86UW7 1296 aa10.54□□□□□ -0.72
TRIM59-208ENST00000543469 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.54□□□□□ -0.72
TRIM59-208ENST00000543469 SLC26A8Q96RN1 970 aa10.54□□□□□ -0.72
TRIM59-208ENST00000543469 MADDQ8WXG6 1647 aa10.54□□□□□ -0.72
TRIM59-208ENST00000543469 MSH6P52701 1360 aa10.54□□□□□ -0.72
TRIM59-208ENST00000543469 DLC1Q96QB1 1528 aa10.54□□□□□ -0.72
TRIM59-208ENST00000543469 FAM9BQ8IZU0 186 aa10.53□□□□□ -0.72
TRIM59-208ENST00000543469 TRPM1Q7Z4N2 1603 aa10.53□□□□□ -0.72
TRIM59-208ENST00000543469 PTPRMP28827 1452 aa10.53□□□□□ -0.72
TRIM59-208ENST00000543469 HNRNPUQ00839 825 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRIM59-208ENST00000543469 LMOD3Q0VAK6 560 aa10.53□□□□□ -0.72
TRIM59-208ENST00000543469 NRXN1Q9ULB1 1477 aa10.52□□□□□ -0.72
TRIM59-208ENST00000543469 PRKRIP1Q9H875 184 aaPredicted RBP10.52□□□□□ -0.72
TRIM59-208ENST00000543469 CEP170BQ9Y4F5 1589 aaPredicted RBP10.52□□□□□ -0.73
TRIM59-208ENST00000543469 TTC21AQ8NDW8 1320 aa10.52□□□□□ -0.73
TRIM59-208ENST00000543469 PIK3C2BO00750 1634 aa10.52□□□□□ -0.73
TRIM59-208ENST00000543469 SETD1BQ9UPS6 1966 aaKnown RBP10.52□□□□□ -0.73
TRIM59-208ENST00000543469 NUDT16Q96DE0 195 aaKnown RBP10.51□□□□□ -0.73
TRIM59-208ENST00000543469 NPC1L1Q9UHC9 1359 aa10.51□□□□□ -0.73
TRIM59-208ENST00000543469 NEXMIFQ5QGS0 1516 aa10.51□□□□□ -0.73
TRIM59-208ENST00000543469 ANKRD36BQ8N2N9 1353 aa10.51□□□□□ -0.73
TRIM59-208ENST00000543469 SCAF1Q9H7N4 1312 aaKnown RBP10.51□□□□□ -0.73
TRIM59-208ENST00000543469 CABP2Q9NPB3 220 aa10.51□□□□□ -0.73
TRIM59-208ENST00000543469 PAK3O75914 559 aaPredicted RBP10.5□□□□□ -0.73
TRIM59-208ENST00000543469 LMOD2Q6P5Q4 547 aa10.5□□□□□ -0.73
TRIM59-208ENST00000543469 PDE3BQ13370 1112 aa10.49□□□□□ -0.73
TRIM59-208ENST00000543469 SLIT1O75093 1534 aa10.49□□□□□ -0.73
TRIM59-208ENST00000543469 CFAP65Q6ZU64 1925 aaKnown RBP10.49□□□□□ -0.73
TRIM59-208ENST00000543469 TMEM131LA2VDJ0 1609 aa10.49□□□□□ -0.73
TRIM59-208ENST00000543469 ALKQ9UM73 1620 aa10.48□□□□□ -0.73
TRIM59-208ENST00000543469 KCNH5Q8NCM2 988 aa10.48□□□□□ -0.73
TRIM59-208ENST00000543469 C19orf44Q9H6X5 657 aa10.48□□□□□ -0.73
TRIM59-208ENST00000543469 AMPHP49418 695 aa10.48□□□□□ -0.73
TRIM59-208ENST00000543469 NCOA3Q9Y6Q9 1424 aa10.48□□□□□ -0.73
TRIM59-208ENST00000543469 ANKARQ7Z5J8 1434 aa10.47□□□□□ -0.73
TRIM59-208ENST00000543469 PPLO60437 1756 aa10.47□□□□□ -0.73
TRIM59-208ENST00000543469 PTCH1Q13635 1447 aa10.47□□□□□ -0.73
TRIM59-208ENST00000543469 SMG6Q86US8 1419 aaKnown RBP10.47□□□□□ -0.73
TRIM59-208ENST00000543469 ASXL1Q8IXJ9 1541 aa10.47□□□□□ -0.73
TRIM59-208ENST00000543469 MS4A1P11836 297 aa10.46□□□□□ -0.73
TRIM59-208ENST00000543469 PHF8Q9UPP1 1060 aa10.46□□□□□ -0.73
TRIM59-208ENST00000543469 ESCO1Q5FWF5 840 aa10.46□□□□□ -0.74
TRIM59-208ENST00000543469 TESK2Q96S53 571 aa10.46□□□□□ -0.74
TRIM59-208ENST00000543469 NSD3Q9BZ95 1437 aa10.46□□□□□ -0.74
TRIM59-208ENST00000543469 ARHGAP23Q9P227 1491 aa10.46□□□□□ -0.74
TRIM59-208ENST00000543469 PPM1GO15355 546 aaPredicted RBP10.46□□□□□ -0.74
TRIM59-208ENST00000543469 CABP1Q9NZU7 370 aa10.46□□□□□ -0.74
TRIM59-208ENST00000543469 CANXP27824 592 aaKnown RBP10.45□□□□□ -0.74
TRIM59-208ENST00000543469 CHMP4BQ9H444 224 aaKnown RBP10.45□□□□□ -0.74
TRIM59-208ENST00000543469 NCKAP5LQ9HCH0 1330 aa10.45□□□□□ -0.74
TRIM59-208ENST00000543469 MYO3AQ8NEV4 1616 aa10.45□□□□□ -0.74
TRIM59-208ENST00000543469 ATP7BP35670 1465 aa10.45□□□□□ -0.74
TRIM59-208ENST00000543469 U2SURPO15042 1029 aaKnown RBP10.45□□□□□ -0.74
TRIM59-208ENST00000543469 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.45□□□□□ -0.74
TRIM59-208ENST00000543469 DISP3Q9P2K9 1392 aa10.44□□□□□ -0.74
TRIM59-208ENST00000543469 DIAPH1O60610 1272 aaKnown RBP10.44□□□□□ -0.74
TRIM59-208ENST00000543469 LTKP29376 864 aa10.44□□□□□ -0.74
TRIM59-208ENST00000543469 NPHP3Q7Z494 1330 aa10.44□□□□□ -0.74
TRIM59-208ENST00000543469 C3P01024 1663 aa10.44□□□□□ -0.74
TRIM59-208ENST00000543469 WAPLQ7Z5K2 1190 aa10.44□□□□□ -0.74
TRIM59-208ENST00000543469 PPIP5K1Q6PFW1 1433 aa10.44□□□□□ -0.74
TRIM59-208ENST00000543469 ZBTB7CA1YPR0 619 aa10.43□□□□□ -0.74
TRIM59-208ENST00000543469 TECPR2O15040 1411 aa10.43□□□□□ -0.74
TRIM59-208ENST00000543469 EDC4Q6P2E9 1401 aaKnown RBP10.43□□□□□ -0.74
TRIM59-208ENST00000543469 NKTRP30414 1462 aaKnown RBP10.43□□□□□ -0.74
TRIM59-208ENST00000543469 ADAMTSL3P82987 1691 aa10.43□□□□□ -0.74
TRIM59-208ENST00000543469 U2AF1L5P0DN76 240 aaPredicted RBP10.42□□□□□ -0.74
TRIM59-208ENST00000543469 U2AF1Q01081 240 aaKnown RBP eCLIP10.42□□□□□ -0.74
TRIM59-208ENST00000543469 RTF1Q92541 710 aaKnown RBP10.42□□□□□ -0.74
TRIM59-208ENST00000543469 SLC12A5Q9H2X9 1139 aa10.42□□□□□ -0.74
TRIM59-208ENST00000543469 MYH16Q9H6N6 1097 aa10.42□□□□□ -0.74
TRIM59-208ENST00000543469 TOM1O60784 492 aa10.42□□□□□ -0.74
TRIM59-208ENST00000543469 HMGB2P26583 209 aaKnown RBP10.42□□□□□ -0.74
TRIM59-208ENST00000543469 PLEKHG3A1L390 1219 aa10.41□□□□□ -0.74
TRIM59-208ENST00000543469 NLRP6P59044 892 aa10.41□□□□□ -0.74
TRIM59-208ENST00000543469 TNNT2P45379 298 aaPredicted RBP10.41□□□□□ -0.74
TRIM59-208ENST00000543469 ABTB2Q8N961 1025 aa10.41□□□□□ -0.74
TRIM59-208ENST00000543469 INSRP06213 1382 aa10.4□□□□□ -0.74
TRIM59-208ENST00000543469 CSB-PGBD3P0DP91 1061 aa10.4□□□□□ -0.74
TRIM59-208ENST00000543469 TTC21BQ7Z4L5 1316 aa10.4□□□□□ -0.74
TRIM59-208ENST00000543469 PPP2R1AP30153 589 aa10.4□□□□□ -0.74
TRIM59-208ENST00000543469 IQGAP1P46940 1657 aa10.4□□□□□ -0.74
TRIM59-208ENST00000543469 UBR1Q8IWV7 1749 aa10.39□□□□□ -0.75
TRIM59-208ENST00000543469 METP08581 1390 aa10.39□□□□□ -0.75
TRIM59-208ENST00000543469 NUTM2FA1L443 756 aa10.39□□□□□ -0.75
TRIM59-208ENST00000543469 RUNDC1Q96C34 613 aa10.38□□□□□ -0.75
TRIM59-208ENST00000543469 ADGRL3Q9HAR2 1447 aa10.38□□□□□ -0.75
TRIM59-208ENST00000543469 ZBTB47Q9UFB7 747 aaPredicted RBP10.38□□□□□ -0.75
TRIM59-208ENST00000543469 ARHGEF10O15013 1369 aa10.38□□□□□ -0.75
TRIM59-208ENST00000543469 QRICH2Q9H0J4 1663 aa10.37□□□□□ -0.75
TRIM59-208ENST00000543469 ACEP12821 1306 aa10.37□□□□□ -0.75
TRIM59-208ENST00000543469 CPS1P31327 1500 aa10.37□□□□□ -0.75
TRIM59-208ENST00000543469 IFT172Q9UG01 1749 aa10.37□□□□□ -0.75
TRIM59-208ENST00000543469 ZNF142P52746 1687 aaPredicted RBP10.37□□□□□ -0.75
TRIM59-208ENST00000543469 TULP4Q9NRJ4 1543 aa10.37□□□□□ -0.75
TRIM59-208ENST00000543469 DCCP43146 1447 aa10.37□□□□□ -0.75
TRIM59-208ENST00000543469 GGNBP2Q9H3C7 697 aa10.36□□□□□ -0.75
TRIM59-208ENST00000543469 ADAMTS13Q76LX8 1427 aa10.36□□□□□ -0.75
TRIM59-208ENST00000543469 ZBED9Q6R2W3 1325 aa10.36□□□□□ -0.75
TRIM59-208ENST00000543469 MED14O60244 1454 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 293.2 ms