RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 PRAG1Q86YV5 1406 aa10.08□□□□□ -0.8
LRP6-206ENST00000543091 SMG6Q86US8 1419 aaKnown RBP10.07□□□□□ -0.8
LRP6-206ENST00000543091 NINLQ9Y2I6 1382 aa10.07□□□□□ -0.8
LRP6-206ENST00000543091 CHMP4BQ9H444 224 aaKnown RBP10.07□□□□□ -0.8
LRP6-206ENST00000543091 EIF2AK4Q9P2K8 1649 aaKnown RBP10.07□□□□□ -0.8
LRP6-206ENST00000543091 SENP3-EIF4A1A0A087X0R7 540 aa10.07□□□□□ -0.8
LRP6-206ENST00000543091 XPCQ01831 940 aaPredicted RBP10.07□□□□□ -0.8
LRP6-206ENST00000543091 EFCAB6Q5THR3 1501 aa10.07□□□□□ -0.8
LRP6-206ENST00000543091 LMTK3Q96Q04 1460 aa10.07□□□□□ -0.8
LRP6-206ENST00000543091 NPHP3Q7Z494 1330 aa10.07□□□□□ -0.8
LRP6-206ENST00000543091 ABCC3O15438 1527 aa10.07□□□□□ -0.8
LRP6-206ENST00000543091 FTSJ3Q8IY81 847 aaKnown RBP10.06□□□□□ -0.8
LRP6-206ENST00000543091 UGGT1Q9NYU2 1555 aa10.06□□□□□ -0.8
LRP6-206ENST00000543091 TEFQ10587 303 aa10.06□□□□□ -0.8
LRP6-206ENST00000543091 KRT28Q7Z3Y7 464 aa10.06□□□□□ -0.8
LRP6-206ENST00000543091 RALGAPBQ86X10 1494 aa10.05□□□□□ -0.8
LRP6-206ENST00000543091 NGEFQ8N5V2 710 aa10.05□□□□□ -0.8
LRP6-206ENST00000543091 YTHDC2Q9H6S0 1430 aaKnown RBP10.05□□□□□ -0.8
LRP6-206ENST00000543091 STRN4Q9NRL3 753 aa10.05□□□□□ -0.8
LRP6-206ENST00000543091 LTKP29376 864 aa10.04□□□□□ -0.8
LRP6-206ENST00000543091 AGLP35573 1532 aa10.04□□□□□ -0.8
LRP6-206ENST00000543091 MTHFSP49914 203 aa10.04□□□□□ -0.8
LRP6-206ENST00000543091 ARHGEF40Q8TER5 1519 aa10.04□□□□□ -0.8
LRP6-206ENST00000543091 NPHP4O75161 1426 aaPredicted RBP10.04□□□□□ -0.8
LRP6-206ENST00000543091 PUS7Q96PZ0 661 aaKnown RBP10.03□□□□□ -0.8
LRP6-206ENST00000543091 TOM1L2Q6ZVM7 507 aa10.03□□□□□ -0.8
LRP6-206ENST00000543091 STK31Q9BXU1 1019 aa10.03□□□□□ -0.8
LRP6-206ENST00000543091 PLEKHG1Q9ULL1 1385 aa10.03□□□□□ -0.8
LRP6-206ENST00000543091 DIP2CQ9Y2E4 1556 aa10.03□□□□□ -0.8
LRP6-206ENST00000543091 CCDC146Q8IYE0 955 aa10.02□□□□□ -0.8
LRP6-206ENST00000543091 TET3O43151 1660 aa10.02□□□□□ -0.81
LRP6-206ENST00000543091 NSD3Q9BZ95 1437 aa10.02□□□□□ -0.81
LRP6-206ENST00000543091 TATP17735 454 aaPredicted RBP10.02□□□□□ -0.81
LRP6-206ENST00000543091 ZC3H6P61129 1189 aaKnown RBP10.02□□□□□ -0.81
LRP6-206ENST00000543091 TTC5Q8N0Z6 440 aa10.02□□□□□ -0.81
LRP6-206ENST00000543091 GOLGA2Q08379 1002 aa10.02□□□□□ -0.81
LRP6-206ENST00000543091 USP35Q9P2H5 1018 aa10.02□□□□□ -0.81
LRP6-206ENST00000543091 TRPM2O94759 1503 aa10.01□□□□□ -0.81
LRP6-206ENST00000543091 ACEP12821 1306 aa10.01□□□□□ -0.81
LRP6-206ENST00000543091 IPO8O15397 1037 aaKnown RBP10.01□□□□□ -0.81
LRP6-206ENST00000543091 PLEKHO1Q53GL0 409 aaPredicted RBP10.01□□□□□ -0.81
LRP6-206ENST00000543091 SIRT1Q96EB6 747 aa10.01□□□□□ -0.81
LRP6-206ENST00000543091 ZNF330Q9Y3S2 320 aaPredicted RBP10.01□□□□□ -0.81
LRP6-206ENST00000543091 PTPRTO14522 1441 aa10.01□□□□□ -0.81
LRP6-206ENST00000543091 FRAT1Q92837 279 aaPredicted RBP10.01□□□□□ -0.81
LRP6-206ENST00000543091 A2ML1A8K2U0 1454 aa10.01□□□□□ -0.81
LRP6-206ENST00000543091 TTC21AQ8NDW8 1320 aa10.01□□□□□ -0.81
LRP6-206ENST00000543091 KDM5CP41229 1560 aa10□□□□□ -0.81
LRP6-206ENST00000543091 PDE3BQ13370 1112 aa10□□□□□ -0.81
LRP6-206ENST00000543091 INO80Q9ULG1 1556 aaPredicted RBP10□□□□□ -0.81
LRP6-206ENST00000543091 ABCC11Q96J66 1382 aa10□□□□□ -0.81
LRP6-206ENST00000543091 LRRIQ1Q96JM4 1722 aa10□□□□□ -0.81
LRP6-206ENST00000543091 FKBP8Q14318 412 aa10□□□□□ -0.81
LRP6-206ENST00000543091 GAS2L2Q8NHY3 880 aa10□□□□□ -0.81
LRP6-206ENST00000543091 SYTL4Q96C24 671 aaPredicted RBP10□□□□□ -0.81
LRP6-206ENST00000543091 NGLY1Q96IV0 654 aa10□□□□□ -0.81
LRP6-206ENST00000543091 MAP3K4Q9Y6R4 1608 aa10□□□□□ -0.81
LRP6-206ENST00000543091 PRDM15P57071 1507 aaPredicted RBP9.99□□□□□ -0.81
LRP6-206ENST00000543091 PPP2R1AP30153 589 aa9.99□□□□□ -0.81
LRP6-206ENST00000543091 RUNDC1Q96C34 613 aa9.99□□□□□ -0.81
LRP6-206ENST00000543091 CCDC136Q96JN2 1154 aa9.99□□□□□ -0.81
LRP6-206ENST00000543091 LRRC59Q96AG4 307 aaKnown RBP9.99□□□□□ -0.81
LRP6-206ENST00000543091 BRD4O60885 1362 aaPredicted RBP9.99□□□□□ -0.81
LRP6-206ENST00000543091 ZMYM4Q5VZL5 1548 aa9.99□□□□□ -0.81
LRP6-206ENST00000543091 ADAMTS2O95450 1211 aa9.99□□□□□ -0.81
LRP6-206ENST00000543091 HMOX1P09601 288 aa9.98□□□□□ -0.81
LRP6-206ENST00000543091 NSD2O96028 1365 aa9.98□□□□□ -0.81
LRP6-206ENST00000543091 PIK3R4Q99570 1358 aa9.98□□□□□ -0.81
LRP6-206ENST00000543091 IQGAP3Q86VI3 1631 aa9.98□□□□□ -0.81
LRP6-206ENST00000543091 CROCC2H7BZ55 1655 aa9.98□□□□□ -0.81
LRP6-206ENST00000543091 NME9Q86XW9 330 aa9.98□□□□□ -0.81
LRP6-206ENST00000543091 HDAC5Q9UQL6 1122 aa9.98□□□□□ -0.81
LRP6-206ENST00000543091 COL17A1Q9UMD9 1497 aaPredicted RBP9.97□□□□□ -0.81
LRP6-206ENST00000543091 SPG7Q9UQ90 795 aa9.97□□□□□ -0.81
LRP6-206ENST00000543091 RRP7AQ9Y3A4 280 aaKnown RBP9.97□□□□□ -0.81
LRP6-206ENST00000543091 PPIP5K1Q6PFW1 1433 aa9.97□□□□□ -0.81
LRP6-206ENST00000543091 RIPK4P57078 832 aa9.97□□□□□ -0.81
LRP6-206ENST00000543091 UNC13BO14795 1591 aa9.97□□□□□ -0.81
LRP6-206ENST00000543091 SF3B2Q13435 895 aaKnown RBP9.97□□□□□ -0.81
LRP6-206ENST00000543091 ABCA6Q8N139 1617 aa9.96□□□□□ -0.81
LRP6-206ENST00000543091 HMGB2P26583 209 aaKnown RBP9.96□□□□□ -0.81
LRP6-206ENST00000543091 APAF1O14727 1248 aa9.96□□□□□ -0.82
LRP6-206ENST00000543091 SLAIN2Q9P270 581 aa9.96□□□□□ -0.82
LRP6-206ENST00000543091 RRS1Q15050 365 aaKnown RBP9.96□□□□□ -0.82
LRP6-206ENST00000543091 LMTK2Q8IWU2 1503 aa9.95□□□□□ -0.82
LRP6-206ENST00000543091 HSP90AB1P08238 724 aaKnown RBP9.95□□□□□ -0.82
LRP6-206ENST00000543091 TTC21BQ7Z4L5 1316 aa9.95□□□□□ -0.82
LRP6-206ENST00000543091 KIF1BO60333 1816 aa9.95□□□□□ -0.82
LRP6-206ENST00000543091 ANKRD36BQ8N2N9 1353 aa9.95□□□□□ -0.82
LRP6-206ENST00000543091 KIDINS220Q9ULH0 1771 aa9.95□□□□□ -0.82
LRP6-206ENST00000543091 SULT6B1Q6IMI4 303 aa9.95□□□□□ -0.82
LRP6-206ENST00000543091 SPATA31E1Q6ZUB1 1445 aa9.95□□□□□ -0.82
LRP6-206ENST00000543091 TMEM94Q12767 1356 aa9.95□□□□□ -0.82
LRP6-206ENST00000543091 DISP3Q9P2K9 1392 aa9.94□□□□□ -0.82
LRP6-206ENST00000543091 PTPRMP28827 1452 aa9.94□□□□□ -0.82
LRP6-206ENST00000543091 MYOM2P54296 1465 aa9.94□□□□□ -0.82
LRP6-206ENST00000543091 PRKAR2BP31323 418 aa9.94□□□□□ -0.82
LRP6-206ENST00000543091 E9PSI1 815 aa9.94□□□□□ -0.82
LRP6-206ENST00000543091 GNAI1P63096 354 aa9.94□□□□□ -0.82
LRP6-206ENST00000543091 ZNF530Q6P9A1 599 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms