RNA–Protein interactions for RNA: ENST00000542879.5

ZEB1-209, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 3,645 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-209ENST00000542879 SLFN5Q08AF3 891 aa7.35□□□□□ -1.23
ZEB1-209ENST00000542879 PRDM4Q9UKN5 801 aa7.35□□□□□ -1.23
ZEB1-209ENST00000542879 STRCQ7RTU9 1775 aa7.35□□□□□ -1.23
ZEB1-209ENST00000542879 PTPRTO14522 1441 aa7.35□□□□□ -1.23
ZEB1-209ENST00000542879 SLIT1O75093 1534 aa7.34□□□□□ -1.23
ZEB1-209ENST00000542879 NKTRP30414 1462 aaKnown RBP7.34□□□□□ -1.23
ZEB1-209ENST00000542879 GSE1Q14687 1217 aa7.34□□□□□ -1.23
ZEB1-209ENST00000542879 CLTCQ00610 1675 aaKnown RBP7.34□□□□□ -1.24
ZEB1-209ENST00000542879 PPLO60437 1756 aa7.33□□□□□ -1.24
ZEB1-209ENST00000542879 ABCC3O15438 1527 aa7.33□□□□□ -1.24
ZEB1-209ENST00000542879 NLRP1Q9C000 1473 aa7.33□□□□□ -1.24
ZEB1-209ENST00000542879 GOLGA2Q08379 1002 aa7.33□□□□□ -1.24
ZEB1-209ENST00000542879 FBLN2P98095 1184 aa7.33□□□□□ -1.24
ZEB1-209ENST00000542879 ALKQ9UM73 1620 aa7.32□□□□□ -1.24
ZEB1-209ENST00000542879 ADGRL1O94910 1474 aa7.32□□□□□ -1.24
ZEB1-209ENST00000542879 USP19O94966 1318 aa7.32□□□□□ -1.24
ZEB1-209ENST00000542879 KIF1BO60333 1816 aa7.32□□□□□ -1.24
ZEB1-209ENST00000542879 PPP6R1Q9UPN7 881 aa7.32□□□□□ -1.24
ZEB1-209ENST00000542879 MED14O60244 1454 aa7.32□□□□□ -1.24
ZEB1-209ENST00000542879 SLC4A3P48751 1232 aa7.32□□□□□ -1.24
ZEB1-209ENST00000542879 SPINK5Q9NQ38 1064 aaPredicted RBP7.32□□□□□ -1.24
ZEB1-209ENST00000542879 KNSTRNQ9Y448 316 aa7.31□□□□□ -1.24
ZEB1-209ENST00000542879 ERVK-7P63135 1459 aa7.31□□□□□ -1.24
ZEB1-209ENST00000542879 WDR43Q15061 677 aaKnown RBP eCLIP7.31□□□□□ -1.24
ZEB1-209ENST00000542879 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.31□□□□□ -1.24
ZEB1-209ENST00000542879 FRAT1Q92837 279 aaPredicted RBP7.31□□□□□ -1.24
ZEB1-209ENST00000542879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.31□□□□□ -1.24
ZEB1-209ENST00000542879 ARHGAP23Q9P227 1491 aa7.31□□□□□ -1.24
ZEB1-209ENST00000542879 USP32Q8NFA0 1604 aa7.3□□□□□ -1.24
ZEB1-209ENST00000542879 MYOM2P54296 1465 aa7.3□□□□□ -1.24
ZEB1-209ENST00000542879 STAC3Q96MF2 364 aa7.3□□□□□ -1.24
ZEB1-209ENST00000542879 BRPF3Q9ULD4 1205 aa7.3□□□□□ -1.24
ZEB1-209ENST00000542879 PODXL2Q9NZ53 605 aa7.3□□□□□ -1.24
ZEB1-209ENST00000542879 NINLQ9Y2I6 1382 aa7.3□□□□□ -1.24
ZEB1-209ENST00000542879 TRAPPC8Q9Y2L5 1435 aa7.29□□□□□ -1.24
ZEB1-209ENST00000542879 CDCA8Q53HL2 280 aa7.29□□□□□ -1.24
ZEB1-209ENST00000542879 XRN1Q8IZH2 1706 aaKnown RBP7.29□□□□□ -1.24
ZEB1-209ENST00000542879 NRXN1Q9ULB1 1477 aa7.29□□□□□ -1.24
ZEB1-209ENST00000542879 NRXN3Q9Y4C0 1643 aa7.29□□□□□ -1.24
ZEB1-209ENST00000542879 IGHDP01880 384 aa7.28□□□□□ -1.24
ZEB1-209ENST00000542879 SETBP1Q9Y6X0 1596 aa7.28□□□□□ -1.24
ZEB1-209ENST00000542879 XIRP1Q702N8 1843 aaKnown RBP7.28□□□□□ -1.24
ZEB1-209ENST00000542879 ADGRB3O60242 1522 aa7.28□□□□□ -1.24
ZEB1-209ENST00000542879 BCAR3O75815 825 aa7.28□□□□□ -1.24
ZEB1-209ENST00000542879 DMRT2Q9Y5R5 561 aa7.28□□□□□ -1.24
ZEB1-209ENST00000542879 ZMYM3Q14202 1370 aa7.28□□□□□ -1.24
ZEB1-209ENST00000542879 E9PSI1 815 aa7.28□□□□□ -1.24
ZEB1-209ENST00000542879 FRAT2O75474 233 aaPredicted RBP7.28□□□□□ -1.24
ZEB1-209ENST00000542879 NGEFQ8N5V2 710 aa7.28□□□□□ -1.24
ZEB1-209ENST00000542879 POLR3AO14802 1390 aaPredicted RBP7.27□□□□□ -1.25
ZEB1-209ENST00000542879 QRICH2Q9H0J4 1663 aa7.27□□□□□ -1.25
ZEB1-209ENST00000542879 APAF1O14727 1248 aa7.27□□□□□ -1.25
ZEB1-209ENST00000542879 PDE3AQ14432 1141 aa7.27□□□□□ -1.25
ZEB1-209ENST00000542879 CCDC146Q8IYE0 955 aa7.27□□□□□ -1.25
ZEB1-209ENST00000542879 SBNO2Q9Y2G9 1366 aa7.26□□□□□ -1.25
ZEB1-209ENST00000542879 CGNL1Q0VF96 1302 aa7.26□□□□□ -1.25
ZEB1-209ENST00000542879 RGS3P49796 1198 aa7.26□□□□□ -1.25
ZEB1-209ENST00000542879 CARD14Q9BXL6 1004 aa7.26□□□□□ -1.25
ZEB1-209ENST00000542879 ADGRB2O60241 1585 aa7.25□□□□□ -1.25
ZEB1-209ENST00000542879 NOS1P29475 1434 aa7.25□□□□□ -1.25
ZEB1-209ENST00000542879 MAPK8IP3Q9UPT6 1336 aa7.25□□□□□ -1.25
ZEB1-209ENST00000542879 SEC24BO95487 1268 aa7.25□□□□□ -1.25
ZEB1-209ENST00000542879 PHF23Q9BUL5 403 aaPredicted RBP7.25□□□□□ -1.25
ZEB1-209ENST00000542879 CHD2O14647 1828 aaKnown RBP7.24□□□□□ -1.25
ZEB1-209ENST00000542879 SETD1BQ9UPS6 1966 aaKnown RBP7.24□□□□□ -1.25
ZEB1-209ENST00000542879 CLUAP1Q96AJ1 413 aa7.24□□□□□ -1.25
ZEB1-209ENST00000542879 ANTXR1Q9H6X2 564 aa7.24□□□□□ -1.25
ZEB1-209ENST00000542879 CEP170BQ9Y4F5 1589 aaPredicted RBP7.24□□□□□ -1.25
ZEB1-209ENST00000542879 WWC1Q8IX03 1113 aa7.24□□□□□ -1.25
ZEB1-209ENST00000542879 KANK1Q14678 1352 aa7.24□□□□□ -1.25
ZEB1-209ENST00000542879 CENPJQ9HC77 1338 aaPredicted RBP7.23□□□□□ -1.25
ZEB1-209ENST00000542879 AAMPQ13685 434 aa7.23□□□□□ -1.25
ZEB1-209ENST00000542879 EFCAB2Q5VUJ9 269 aa7.23□□□□□ -1.25
ZEB1-209ENST00000542879 ADGRB1O14514 1584 aa7.23□□□□□ -1.25
ZEB1-209ENST00000542879 FAM43AQ8N2R8 423 aa7.22□□□□□ -1.25
ZEB1-209ENST00000542879 ARHGEF28Q8N1W1 1705 aaKnown RBP7.22□□□□□ -1.25
ZEB1-209ENST00000542879 PANK1Q8TE04 598 aa7.22□□□□□ -1.25
ZEB1-209ENST00000542879 ZMYND15Q9H091 742 aa7.22□□□□□ -1.25
ZEB1-209ENST00000542879 MYO5BQ9ULV0 1848 aa7.22□□□□□ -1.25
ZEB1-209ENST00000542879 ANKRD26Q9UPS8 1709 aa7.22□□□□□ -1.25
ZEB1-209ENST00000542879 ZFYVE9O95405 1425 aa7.22□□□□□ -1.25
ZEB1-209ENST00000542879 RARSP54136 660 aaKnown RBP7.21□□□□□ -1.25
ZEB1-209ENST00000542879 TBC1D32Q96NH3 1257 aa7.21□□□□□ -1.25
ZEB1-209ENST00000542879 COG6Q9Y2V7 657 aa7.21□□□□□ -1.25
ZEB1-209ENST00000542879 SPAG9O60271 1321 aaKnown RBP7.21□□□□□ -1.25
ZEB1-209ENST00000542879 ADGRF5Q8IZF2 1346 aa7.21□□□□□ -1.25
ZEB1-209ENST00000542879 LRRC7Q96NW7 1537 aa7.21□□□□□ -1.26
ZEB1-209ENST00000542879 TOPAZ1Q8N9V7 1692 aa7.21□□□□□ -1.26
ZEB1-209ENST00000542879 NCBP3Q53F19 620 aaKnown RBP7.21□□□□□ -1.26
ZEB1-209ENST00000542879 CFAP70Q5T0N1 1121 aa7.21□□□□□ -1.26
ZEB1-209ENST00000542879 POGKQ9P215 609 aa7.21□□□□□ -1.26
ZEB1-209ENST00000542879 NSD3Q9BZ95 1437 aa7.2□□□□□ -1.26
ZEB1-209ENST00000542879 RLBP1P12271 317 aa7.2□□□□□ -1.26
ZEB1-209ENST00000542879 PCDHB15Q9Y5E8 787 aa7.2□□□□□ -1.26
ZEB1-209ENST00000542879 FGD1P98174 961 aa7.2□□□□□ -1.26
ZEB1-209ENST00000542879 CCDC27Q2M243 656 aa7.2□□□□□ -1.26
ZEB1-209ENST00000542879 PMFBP1Q8TBY8 1022 aa7.2□□□□□ -1.26
ZEB1-209ENST00000542879 WDR63Q8IWG1 891 aa7.2□□□□□ -1.26
ZEB1-209ENST00000542879 CRYBG1Q9Y4K1 1723 aa7.2□□□□□ -1.26
ZEB1-209ENST00000542879 BECN1Q14457 450 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms