RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 LRRC7Q96NW7 1537 aa8.26□□□□□ -1.09
ABCF1-207ENST00000542772 C19orf44Q9H6X5 657 aa8.26□□□□□ -1.09
ABCF1-207ENST00000542772 TMEM94Q12767 1356 aa8.25□□□□□ -1.09
ABCF1-207ENST00000542772 XIRP1Q702N8 1843 aaKnown RBP8.25□□□□□ -1.09
ABCF1-207ENST00000542772 WASLO00401 505 aaPredicted RBP8.25□□□□□ -1.09
ABCF1-207ENST00000542772 C11orf95C9JLR9 678 aaPredicted RBP8.23□□□□□ -1.09
ABCF1-207ENST00000542772 RBM33Q96EV2 1170 aaKnown RBP8.23□□□□□ -1.09
ABCF1-207ENST00000542772 HIRIP3Q9BW71 556 aaPredicted RBP8.23□□□□□ -1.09
ABCF1-207ENST00000542772 CDK19Q9BWU1 502 aa8.23□□□□□ -1.09
ABCF1-207ENST00000542772 ADGRL3Q9HAR2 1447 aa8.22□□□□□ -1.09
ABCF1-207ENST00000542772 IQSEC2Q5JU85 1478 aa8.22□□□□□ -1.09
ABCF1-207ENST00000542772 TMF1P82094 1093 aa8.22□□□□□ -1.09
ABCF1-207ENST00000542772 SAFB2Q14151 953 aaKnown RBP eCLIP8.22□□□□□ -1.09
ABCF1-207ENST00000542772 EVC2Q86UK5 1308 aa8.22□□□□□ -1.09
ABCF1-207ENST00000542772 MINK1Q8N4C8 1332 aaPredicted RBP8.22□□□□□ -1.09
ABCF1-207ENST00000542772 ADGRB2O60241 1585 aa8.22□□□□□ -1.09
ABCF1-207ENST00000542772 DCCP43146 1447 aa8.21□□□□□ -1.09
ABCF1-207ENST00000542772 QRICH2Q9H0J4 1663 aa8.21□□□□□ -1.09
ABCF1-207ENST00000542772 CDCA8Q53HL2 280 aa8.21□□□□□ -1.1
ABCF1-207ENST00000542772 CADPS2Q86UW7 1296 aa8.21□□□□□ -1.1
ABCF1-207ENST00000542772 CERKQ8TCT0 537 aa8.21□□□□□ -1.1
ABCF1-207ENST00000542772 CCDC61Q9Y6R9 512 aa8.21□□□□□ -1.1
ABCF1-207ENST00000542772 ZNF316A6NFI3 1004 aaPredicted RBP8.2□□□□□ -1.1
ABCF1-207ENST00000542772 NUDT16Q96DE0 195 aaKnown RBP8.2□□□□□ -1.1
ABCF1-207ENST00000542772 MSH6P52701 1360 aa8.2□□□□□ -1.1
ABCF1-207ENST00000542772 NALCNQ8IZF0 1738 aa8.2□□□□□ -1.1
ABCF1-207ENST00000542772 TULP4Q9NRJ4 1543 aa8.19□□□□□ -1.1
ABCF1-207ENST00000542772 PLEKHG3A1L390 1219 aa8.19□□□□□ -1.1
ABCF1-207ENST00000542772 ATF3P18847 181 aa8.19□□□□□ -1.1
ABCF1-207ENST00000542772 CABP2Q9NPB3 220 aa8.19□□□□□ -1.1
ABCF1-207ENST00000542772 SLAIN2Q9P270 581 aa8.19□□□□□ -1.1
ABCF1-207ENST00000542772 PRR36Q9H6K5 1346 aa8.19□□□□□ -1.1
ABCF1-207ENST00000542772 DISP3Q9P2K9 1392 aa8.19□□□□□ -1.1
ABCF1-207ENST00000542772 CDC42BPGQ6DT37 1551 aa8.18□□□□□ -1.1
ABCF1-207ENST00000542772 FMN2Q9NZ56 1722 aa8.18□□□□□ -1.1
ABCF1-207ENST00000542772 C14orf37Q86TY3 774 aa8.18□□□□□ -1.1
ABCF1-207ENST00000542772 WASHC2AQ641Q2 1341 aa8.18□□□□□ -1.1
ABCF1-207ENST00000542772 ANKARQ7Z5J8 1434 aa8.18□□□□□ -1.1
ABCF1-207ENST00000542772 TOM1O60784 492 aa8.17□□□□□ -1.1
ABCF1-207ENST00000542772 SRPK2P78362 688 aaKnown RBP8.17□□□□□ -1.1
ABCF1-207ENST00000542772 ZNF692Q9BU19 519 aaPredicted RBP8.17□□□□□ -1.1
ABCF1-207ENST00000542772 CABP1Q9NZU7 370 aa8.17□□□□□ -1.1
ABCF1-207ENST00000542772 KIF7Q2M1P5 1343 aa8.17□□□□□ -1.1
ABCF1-207ENST00000542772 CCDC7Q96M83 1385 aa8.17□□□□□ -1.1
ABCF1-207ENST00000542772 MST1RQ04912 1400 aa8.17□□□□□ -1.1
ABCF1-207ENST00000542772 USP32Q8NFA0 1604 aa8.17□□□□□ -1.1
ABCF1-207ENST00000542772 RGPD8O14715 1765 aaPredicted RBP8.17□□□□□ -1.1
ABCF1-207ENST00000542772 C1orf167Q5SNV9 1468 aa8.16□□□□□ -1.1
ABCF1-207ENST00000542772 ATAD2Q6PL18 1390 aa8.16□□□□□ -1.1
ABCF1-207ENST00000542772 ORAI2Q96SN7 254 aa8.16□□□□□ -1.1
ABCF1-207ENST00000542772 SLC12A5Q9H2X9 1139 aa8.16□□□□□ -1.1
ABCF1-207ENST00000542772 ATP7BP35670 1465 aa8.15□□□□□ -1.1
ABCF1-207ENST00000542772 NINLQ9Y2I6 1382 aa8.15□□□□□ -1.1
ABCF1-207ENST00000542772 PER1O15534 1290 aaPredicted RBP8.15□□□□□ -1.1
ABCF1-207ENST00000542772 PHF8Q9UPP1 1060 aa8.15□□□□□ -1.1
ABCF1-207ENST00000542772 CPSF1Q10570 1443 aaKnown RBP8.14□□□□□ -1.11
ABCF1-207ENST00000542772 POLR3AO14802 1390 aaPredicted RBP8.14□□□□□ -1.11
ABCF1-207ENST00000542772 NUTM2FA1L443 756 aa8.14□□□□□ -1.11
ABCF1-207ENST00000542772 ESCO1Q5FWF5 840 aa8.14□□□□□ -1.11
ABCF1-207ENST00000542772 BRINP3Q76B58 766 aa8.14□□□□□ -1.11
ABCF1-207ENST00000542772 PPIP5K1Q6PFW1 1433 aa8.13□□□□□ -1.11
ABCF1-207ENST00000542772 ACEP12821 1306 aa8.13□□□□□ -1.11
ABCF1-207ENST00000542772 PMFBP1Q8TBY8 1022 aa8.13□□□□□ -1.11
ABCF1-207ENST00000542772 CARD14Q9BXL6 1004 aa8.13□□□□□ -1.11
ABCF1-207ENST00000542772 TOPAZ1Q8N9V7 1692 aa8.13□□□□□ -1.11
ABCF1-207ENST00000542772 CD163L1Q9NR16 1453 aa8.13□□□□□ -1.11
ABCF1-207ENST00000542772 SSH2Q76I76 1423 aa8.12□□□□□ -1.11
ABCF1-207ENST00000542772 BRD4O60885 1362 aaPredicted RBP8.12□□□□□ -1.11
ABCF1-207ENST00000542772 UBAP1LF5GYI3 381 aa8.12□□□□□ -1.11
ABCF1-207ENST00000542772 FOXO3O43524 673 aa8.12□□□□□ -1.11
ABCF1-207ENST00000542772 TMC1Q8TDI8 760 aa8.12□□□□□ -1.11
ABCF1-207ENST00000542772 PANK3Q9H999 370 aa8.12□□□□□ -1.11
ABCF1-207ENST00000542772 TERF2IPQ9NYB0 399 aa8.12□□□□□ -1.11
ABCF1-207ENST00000542772 ITSN1Q15811 1721 aa8.12□□□□□ -1.11
ABCF1-207ENST00000542772 ANKRD36BQ8N2N9 1353 aa8.11□□□□□ -1.11
ABCF1-207ENST00000542772 SOS2Q07890 1332 aaPredicted RBP8.11□□□□□ -1.11
ABCF1-207ENST00000542772 KRT28Q7Z3Y7 464 aa8.11□□□□□ -1.11
ABCF1-207ENST00000542772 HDGFL2Q7Z4V5 671 aaPredicted RBP8.11□□□□□ -1.11
ABCF1-207ENST00000542772 NGDNQ8NEJ9 315 aaKnown RBP8.11□□□□□ -1.11
ABCF1-207ENST00000542772 MYOM1P52179 1685 aa8.11□□□□□ -1.11
ABCF1-207ENST00000542772 NPHP3Q7Z494 1330 aa8.1□□□□□ -1.11
ABCF1-207ENST00000542772 PSME1Q06323 249 aa8.1□□□□□ -1.11
ABCF1-207ENST00000542772 DDX10Q13206 875 aaKnown RBP8.1□□□□□ -1.11
ABCF1-207ENST00000542772 KIF1AQ12756 1690 aa8.1□□□□□ -1.11
ABCF1-207ENST00000542772 AKAP12Q02952 1782 aa8.1□□□□□ -1.11
ABCF1-207ENST00000542772 POLR3GLQ9BT43 218 aa8.09□□□□□ -1.11
ABCF1-207ENST00000542772 USP6P35125 1406 aa8.09□□□□□ -1.11
ABCF1-207ENST00000542772 A0A1W2PP64 1363 aa8.09□□□□□ -1.12
ABCF1-207ENST00000542772 SBNO1A3KN83 1393 aa8.09□□□□□ -1.12
ABCF1-207ENST00000542772 KTN1Q86UP2 1357 aaKnown RBP8.09□□□□□ -1.12
ABCF1-207ENST00000542772 ROBO1Q9Y6N7 1651 aa8.08□□□□□ -1.12
ABCF1-207ENST00000542772 TTC21BQ7Z4L5 1316 aa8.08□□□□□ -1.12
ABCF1-207ENST00000542772 FYB1O15117 783 aa8.08□□□□□ -1.12
ABCF1-207ENST00000542772 DDX17Q92841 729 aaKnown RBP8.08□□□□□ -1.12
ABCF1-207ENST00000542772 LRRC59Q96AG4 307 aaKnown RBP8.08□□□□□ -1.12
ABCF1-207ENST00000542772 NPC1L1Q9UHC9 1359 aa8.08□□□□□ -1.12
ABCF1-207ENST00000542772 NHSL1Q5SYE7 1610 aa8.07□□□□□ -1.12
ABCF1-207ENST00000542772 AHDC1Q5TGY3 1603 aaPredicted RBP8.07□□□□□ -1.12
ABCF1-207ENST00000542772 SPATA31A3Q5VYP0 1347 aa8.07□□□□□ -1.12
ABCF1-207ENST00000542772 TTC21AQ8NDW8 1320 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms