RNA–Protein interactions for RNA: ENST00000542600.1

DEFB109F-202, Transcript of defensin beta 109F (pseudogene), humanhuman

TSL 2 BASIC

Gene DEFB109F, Length 509 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB109F-202ENST00000542600 GDPD2Q9HCC8 539 aa10.94□□□□□ -0.66
DEFB109F-202ENST00000542600 LSM11P83369 360 aaKnown RBP eCLIP10.93□□□□□ -0.66
DEFB109F-202ENST00000542600 CCDC82Q8N4S0 544 aa10.93□□□□□ -0.66
DEFB109F-202ENST00000542600 WWC1Q8IX03 1113 aa10.92□□□□□ -0.66
DEFB109F-202ENST00000542600 LRCH3Q96II8 777 aa10.92□□□□□ -0.66
DEFB109F-202ENST00000542600 HELBQ8NG08 1087 aaPredicted RBP10.91□□□□□ -0.66
DEFB109F-202ENST00000542600 ZNF330Q9Y3S2 320 aaPredicted RBP10.91□□□□□ -0.66
DEFB109F-202ENST00000542600 C6orf229H3BNL8 230 aa10.9□□□□□ -0.66
DEFB109F-202ENST00000542600 HRO43593 1189 aa10.9□□□□□ -0.66
DEFB109F-202ENST00000542600 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.9□□□□□ -0.66
DEFB109F-202ENST00000542600 TBC1D2BQ9UPU7 963 aa10.9□□□□□ -0.66
DEFB109F-202ENST00000542600 ACTN4O43707 911 aaKnown RBP10.89□□□□□ -0.67
DEFB109F-202ENST00000542600 ABL2P42684 1182 aa10.89□□□□□ -0.67
DEFB109F-202ENST00000542600 CTDSPL2Q05D32 466 aa10.89□□□□□ -0.67
DEFB109F-202ENST00000542600 GJD4Q96KN9 370 aaPredicted RBP10.89□□□□□ -0.67
DEFB109F-202ENST00000542600 CFAP99D6REC4 459 aa10.88□□□□□ -0.67
DEFB109F-202ENST00000542600 MORN1Q5T089 497 aa10.87□□□□□ -0.67
DEFB109F-202ENST00000542600 LCE2DQ5TA82 110 aaPredicted RBP10.87□□□□□ -0.67
DEFB109F-202ENST00000542600 PRR14Q9BWN1 585 aa10.87□□□□□ -0.67
DEFB109F-202ENST00000542600 PLSCR2Q9NRY7 297 aa10.87□□□□□ -0.67
DEFB109F-202ENST00000542600 NDUFB9Q9Y6M9 179 aa10.87□□□□□ -0.67
DEFB109F-202ENST00000542600 ANKK1Q8NFD2 765 aa10.86□□□□□ -0.67
DEFB109F-202ENST00000542600 TSC1Q92574 1164 aa10.86□□□□□ -0.67
DEFB109F-202ENST00000542600 SERPINA10Q9UK55 444 aa10.86□□□□□ -0.67
DEFB109F-202ENST00000542600 SYMPKQ92797 1274 aaKnown RBP10.85□□□□□ -0.67
DEFB109F-202ENST00000542600 CCDC97Q96F63 343 aaPredicted RBP10.85□□□□□ -0.67
DEFB109F-202ENST00000542600 HMX1Q9NP08 348 aaPredicted RBP10.85□□□□□ -0.67
DEFB109F-202ENST00000542600 GOLGA8CPA6NN73 597 aa10.84□□□□□ -0.67
DEFB109F-202ENST00000542600 Q3C1V9 767 aa10.84□□□□□ -0.67
DEFB109F-202ENST00000542600 RETREG3Q86VR2 466 aa10.84□□□□□ -0.67
DEFB109F-202ENST00000542600 PRR7Q8TB68 274 aa10.84□□□□□ -0.67
DEFB109F-202ENST00000542600 STAC3Q96MF2 364 aa10.84□□□□□ -0.67
DEFB109F-202ENST00000542600 TRIM34Q9BYJ4 488 aa10.84□□□□□ -0.67
DEFB109F-202ENST00000542600 SLC27A5Q9Y2P5 690 aa10.84□□□□□ -0.67
DEFB109F-202ENST00000542600 PUS10Q3MIT2 529 aaKnown RBP10.83□□□□□ -0.68
DEFB109F-202ENST00000542600 LRRN4Q8WUT4 740 aa10.83□□□□□ -0.68
DEFB109F-202ENST00000542600 SOWAHBA6NEL2 793 aa10.82□□□□□ -0.68
DEFB109F-202ENST00000542600 ANKRD13DQ6ZTN6 518 aa10.82□□□□□ -0.68
DEFB109F-202ENST00000542600 PPP4CP60510 307 aa10.81□□□□□ -0.68
DEFB109F-202ENST00000542600 HPS5Q9UPZ3 1129 aa10.81□□□□□ -0.68
DEFB109F-202ENST00000542600 IRF5Q13568 498 aa10.8□□□□□ -0.68
DEFB109F-202ENST00000542600 DESI1Q6ICB0 168 aa10.8□□□□□ -0.68
DEFB109F-202ENST00000542600 TSR3Q9UJK0 312 aaKnown RBP10.8□□□□□ -0.68
DEFB109F-202ENST00000542600 GPR37L1O60883 481 aa10.79□□□□□ -0.68
DEFB109F-202ENST00000542600 POM121CA8CG34 1229 aa10.78□□□□□ -0.68
DEFB109F-202ENST00000542600 BCAMP50895 628 aa10.78□□□□□ -0.68
DEFB109F-202ENST00000542600 APLP1P51693 650 aa10.78□□□□□ -0.68
DEFB109F-202ENST00000542600 WASHC4Q2M389 1173 aa10.78□□□□□ -0.68
DEFB109F-202ENST00000542600 SALL2Q9Y467 1007 aaPredicted RBP10.78□□□□□ -0.68
DEFB109F-202ENST00000542600 GLMNQ92990 594 aa10.77□□□□□ -0.69
DEFB109F-202ENST00000542600 WNT2BQ93097 391 aa10.77□□□□□ -0.69
DEFB109F-202ENST00000542600 CALR3Q96L12 384 aaKnown RBP10.77□□□□□ -0.69
DEFB109F-202ENST00000542600 PER1O15534 1290 aaPredicted RBP10.76□□□□□ -0.69
DEFB109F-202ENST00000542600 BLOC1S3Q6QNY0 202 aa10.76□□□□□ -0.69
DEFB109F-202ENST00000542600 RNF19BQ6ZMZ0 732 aa10.76□□□□□ -0.69
DEFB109F-202ENST00000542600 EPS8L1Q8TE68 723 aa10.76□□□□□ -0.69
DEFB109F-202ENST00000542600 BRICD5Q6PL45 260 aa10.75□□□□□ -0.69
DEFB109F-202ENST00000542600 USB1Q9BQ65 265 aaKnown RBP10.75□□□□□ -0.69
DEFB109F-202ENST00000542600 PCDHB3Q9Y5E6 796 aa10.75□□□□□ -0.69
DEFB109F-202ENST00000542600 NR1I2O75469 434 aa10.74□□□□□ -0.69
DEFB109F-202ENST00000542600 NR6A1Q15406 480 aa10.74□□□□□ -0.69
DEFB109F-202ENST00000542600 LYPD8Q6UX82 237 aa10.74□□□□□ -0.69
DEFB109F-202ENST00000542600 SCUBE3Q8IX30 993 aa10.73□□□□□ -0.69
DEFB109F-202ENST00000542600 FMNL1O95466 1100 aaPredicted RBP10.72□□□□□ -0.69
DEFB109F-202ENST00000542600 THAP11Q96EK4 314 aa10.72□□□□□ -0.69
DEFB109F-202ENST00000542600 VAC14Q08AM6 782 aa10.71□□□□□ -0.69
DEFB109F-202ENST00000542600 HDGFL1Q5TGJ6 251 aa10.7□□□□□ -0.7
DEFB109F-202ENST00000542600 PNMA1Q8ND90 353 aa10.7□□□□□ -0.7
DEFB109F-202ENST00000542600 ADAMTS19Q8TE59 1207 aa10.7□□□□□ -0.7
DEFB109F-202ENST00000542600 WBP1LQ9NX94 342 aa10.7□□□□□ -0.7
DEFB109F-202ENST00000542600 JUNDP17535 347 aa10.68□□□□□ -0.7
DEFB109F-202ENST00000542600 KRTAP3-3Q9BYR6 98 aa10.68□□□□□ -0.7
DEFB109F-202ENST00000542600 KRTAP3-2Q9BYR7 98 aa10.68□□□□□ -0.7
DEFB109F-202ENST00000542600 THSD4Q6ZMP0 1018 aa10.67□□□□□ -0.7
DEFB109F-202ENST00000542600 PDIA4P13667 645 aaKnown RBP10.66□□□□□ -0.7
DEFB109F-202ENST00000542600 SOX11P35716 441 aa10.66□□□□□ -0.7
DEFB109F-202ENST00000542600 PTPRNQ16849 979 aa10.66□□□□□ -0.7
DEFB109F-202ENST00000542600 ALG2Q9H553 416 aa10.66□□□□□ -0.7
DEFB109F-202ENST00000542600 PPP1R15AO75807 674 aaPredicted RBP10.65□□□□□ -0.7
DEFB109F-202ENST00000542600 F12P00748 615 aaPredicted RBP10.65□□□□□ -0.7
DEFB109F-202ENST00000542600 MSS51Q4VC12 460 aa10.65□□□□□ -0.7
DEFB109F-202ENST00000542600 NYAP1Q6ZVC0 841 aa10.64□□□□□ -0.71
DEFB109F-202ENST00000542600 FKBPLQ9UIM3 349 aa10.63□□□□□ -0.71
DEFB109F-202ENST00000542600 COPS2P61201 443 aa10.62□□□□□ -0.71
DEFB109F-202ENST00000542600 KCTD12Q96CX2 325 aaKnown RBP10.62□□□□□ -0.71
DEFB109F-202ENST00000542600 SPSB2Q99619 263 aa10.62□□□□□ -0.71
DEFB109F-202ENST00000542600 ZC3H4Q9UPT8 1303 aaKnown RBP10.61□□□□□ -0.71
DEFB109F-202ENST00000542600 DXOO77932 396 aaKnown RBP10.61□□□□□ -0.71
DEFB109F-202ENST00000542600 NR1H3Q13133 447 aa10.61□□□□□ -0.71
DEFB109F-202ENST00000542600 FAM160A2Q8N612 972 aaPredicted RBP10.61□□□□□ -0.71
DEFB109F-202ENST00000542600 MAP10Q9P2G4 905 aa10.61□□□□□ -0.71
DEFB109F-202ENST00000542600 MMP16P51512 607 aa10.6□□□□□ -0.71
DEFB109F-202ENST00000542600 EIF4G2P78344 907 aaKnown RBP eCLIP10.6□□□□□ -0.71
DEFB109F-202ENST00000542600 SEMA3FQ13275 785 aa10.6□□□□□ -0.71
DEFB109F-202ENST00000542600 PPP1R12CQ9BZL4 782 aa10.6□□□□□ -0.71
DEFB109F-202ENST00000542600 CCNYL3P0C7X3 344 aa10.59□□□□□ -0.71
DEFB109F-202ENST00000542600 CTHP32929 405 aa10.59□□□□□ -0.71
DEFB109F-202ENST00000542600 CFAP70Q5T0N1 1121 aa10.59□□□□□ -0.71
DEFB109F-202ENST00000542600 ZBBXA8MT70 800 aa10.58□□□□□ -0.72
DEFB109F-202ENST00000542600 FBXO45P0C2W1 286 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms