RNA–Protein interactions for RNA: ENST00000542287.6

ATXN2-215, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-215ENST00000542287 POLR3GLQ9BT43 218 aa8.01□□□□□ -1.13
ATXN2-215ENST00000542287 RALGAPBQ86X10 1494 aa8.01□□□□□ -1.13
ATXN2-215ENST00000542287 ABCC11Q96J66 1382 aa8□□□□□ -1.13
ATXN2-215ENST00000542287 DCCP43146 1447 aa8□□□□□ -1.13
ATXN2-215ENST00000542287 CNGB1Q14028 1251 aaPredicted RBP8□□□□□ -1.13
ATXN2-215ENST00000542287 ARHGEF28Q8N1W1 1705 aaKnown RBP8□□□□□ -1.13
ATXN2-215ENST00000542287 RGL3Q3MIN7 710 aa8□□□□□ -1.13
ATXN2-215ENST00000542287 GPRASP1Q5JY77 1395 aa8□□□□□ -1.13
ATXN2-215ENST00000542287 HNRNPUQ00839 825 aaKnown RBP eCLIP8□□□□□ -1.13
ATXN2-215ENST00000542287 CARD11Q9BXL7 1154 aa8□□□□□ -1.13
ATXN2-215ENST00000542287 METP08581 1390 aa7.99□□□□□ -1.13
ATXN2-215ENST00000542287 BCANQ96GW7 911 aa7.99□□□□□ -1.13
ATXN2-215ENST00000542287 YTHDC2Q9H6S0 1430 aaKnown RBP7.99□□□□□ -1.13
ATXN2-215ENST00000542287 CDC42BPGQ6DT37 1551 aa7.99□□□□□ -1.13
ATXN2-215ENST00000542287 NALCNQ8IZF0 1738 aa7.99□□□□□ -1.13
ATXN2-215ENST00000542287 ZNF335Q9H4Z2 1342 aaPredicted RBP7.98□□□□□ -1.13
ATXN2-215ENST00000542287 FKBP8Q14318 412 aa7.98□□□□□ -1.13
ATXN2-215ENST00000542287 ST20-MTHFSA0A0A6YYL1 179 aa7.98□□□□□ -1.13
ATXN2-215ENST00000542287 CERKQ8TCT0 537 aa7.97□□□□□ -1.13
ATXN2-215ENST00000542287 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.97□□□□□ -1.13
ATXN2-215ENST00000542287 NBPF1Q3BBV0 1214 aa7.97□□□□□ -1.13
ATXN2-215ENST00000542287 FAM9BQ8IZU0 186 aa7.97□□□□□ -1.13
ATXN2-215ENST00000542287 RTN4Q9NQC3 1192 aaKnown RBP7.97□□□□□ -1.13
ATXN2-215ENST00000542287 ADGRL3Q9HAR2 1447 aa7.97□□□□□ -1.13
ATXN2-215ENST00000542287 SLC26A8Q96RN1 970 aa7.97□□□□□ -1.13
ATXN2-215ENST00000542287 MRS2Q9HD23 443 aa7.97□□□□□ -1.13
ATXN2-215ENST00000542287 FMN2Q9NZ56 1722 aa7.96□□□□□ -1.13
ATXN2-215ENST00000542287 ROCK2O75116 1388 aaKnown RBP7.96□□□□□ -1.14
ATXN2-215ENST00000542287 TSHZ2Q9NRE2 1034 aa7.96□□□□□ -1.14
ATXN2-215ENST00000542287 AMOTL2Q9Y2J4 779 aa7.96□□□□□ -1.14
ATXN2-215ENST00000542287 USP54Q70EL1 1684 aa7.95□□□□□ -1.14
ATXN2-215ENST00000542287 NUTM2DQ5VT03 806 aaPredicted RBP7.95□□□□□ -1.14
ATXN2-215ENST00000542287 TMEM94Q12767 1356 aa7.94□□□□□ -1.14
ATXN2-215ENST00000542287 QRICH2Q9H0J4 1663 aa7.94□□□□□ -1.14
ATXN2-215ENST00000542287 ROBO2Q9HCK4 1378 aa7.94□□□□□ -1.14
ATXN2-215ENST00000542287 KIF1AQ12756 1690 aa7.94□□□□□ -1.14
ATXN2-215ENST00000542287 CFAP70Q5T0N1 1121 aa7.94□□□□□ -1.14
ATXN2-215ENST00000542287 MSH6P52701 1360 aa7.93□□□□□ -1.14
ATXN2-215ENST00000542287 EIF3AQ14152 1382 aaKnown RBP7.93□□□□□ -1.14
ATXN2-215ENST00000542287 ITSN1Q15811 1721 aa7.93□□□□□ -1.14
ATXN2-215ENST00000542287 TOPAZ1Q8N9V7 1692 aa7.93□□□□□ -1.14
ATXN2-215ENST00000542287 SBNO2Q9Y2G9 1366 aa7.93□□□□□ -1.14
ATXN2-215ENST00000542287 SENP3-EIF4A1A0A087X0R7 540 aa7.93□□□□□ -1.14
ATXN2-215ENST00000542287 PROSER2Q86WR7 435 aaPredicted RBP7.93□□□□□ -1.14
ATXN2-215ENST00000542287 ANKARQ7Z5J8 1434 aa7.92□□□□□ -1.14
ATXN2-215ENST00000542287 NHSL1Q5SYE7 1610 aa7.92□□□□□ -1.14
ATXN2-215ENST00000542287 ANO8Q9HCE9 1232 aaPredicted RBP7.92□□□□□ -1.14
ATXN2-215ENST00000542287 AHDC1Q5TGY3 1603 aaPredicted RBP7.92□□□□□ -1.14
ATXN2-215ENST00000542287 IRX6P78412 446 aaPredicted RBP7.91□□□□□ -1.14
ATXN2-215ENST00000542287 C19orf44Q9H6X5 657 aa7.91□□□□□ -1.14
ATXN2-215ENST00000542287 TULP4Q9NRJ4 1543 aa7.91□□□□□ -1.14
ATXN2-215ENST00000542287 MST1RQ04912 1400 aa7.9□□□□□ -1.14
ATXN2-215ENST00000542287 FBXO41Q8TF61 875 aa7.9□□□□□ -1.14
ATXN2-215ENST00000542287 USP32Q8NFA0 1604 aa7.9□□□□□ -1.15
ATXN2-215ENST00000542287 DISP3Q9P2K9 1392 aa7.9□□□□□ -1.15
ATXN2-215ENST00000542287 NEFLP07196 543 aa7.9□□□□□ -1.15
ATXN2-215ENST00000542287 UBE2Q2Q8WVN8 375 aa7.9□□□□□ -1.15
ATXN2-215ENST00000542287 TESK2Q96S53 571 aa7.9□□□□□ -1.15
ATXN2-215ENST00000542287 ROBO1Q9Y6N7 1651 aa7.89□□□□□ -1.15
ATXN2-215ENST00000542287 TOM1O60784 492 aa7.89□□□□□ -1.15
ATXN2-215ENST00000542287 CADPS2Q86UW7 1296 aa7.89□□□□□ -1.15
ATXN2-215ENST00000542287 TMEM132EQ6IEE7 984 aa7.88□□□□□ -1.15
ATXN2-215ENST00000542287 PUS7Q96PZ0 661 aaKnown RBP7.88□□□□□ -1.15
ATXN2-215ENST00000542287 ZBED9Q6R2W3 1325 aa7.88□□□□□ -1.15
ATXN2-215ENST00000542287 C1orf167Q5SNV9 1468 aa7.88□□□□□ -1.15
ATXN2-215ENST00000542287 PLEKHH1Q9ULM0 1364 aa7.88□□□□□ -1.15
ATXN2-215ENST00000542287 ILDR1Q86SU0 546 aaPredicted RBP7.87□□□□□ -1.15
ATXN2-215ENST00000542287 CENPJQ9HC77 1338 aaPredicted RBP7.87□□□□□ -1.15
ATXN2-215ENST00000542287 PNISRQ8TF01 805 aaKnown RBP7.87□□□□□ -1.15
ATXN2-215ENST00000542287 PER1O15534 1290 aaPredicted RBP7.86□□□□□ -1.15
ATXN2-215ENST00000542287 PRAM1Q96QH2 718 aa7.86□□□□□ -1.15
ATXN2-215ENST00000542287 PHLPP1O60346 1717 aa7.86□□□□□ -1.15
ATXN2-215ENST00000542287 SHPRHQ149N8 1683 aa7.86□□□□□ -1.15
ATXN2-215ENST00000542287 COL16A1Q07092 1604 aaPredicted RBP7.86□□□□□ -1.15
ATXN2-215ENST00000542287 ATF3P18847 181 aa7.85□□□□□ -1.15
ATXN2-215ENST00000542287 COL22A1Q8NFW1 1626 aaPredicted RBP7.85□□□□□ -1.15
ATXN2-215ENST00000542287 BRD4O60885 1362 aaPredicted RBP7.85□□□□□ -1.15
ATXN2-215ENST00000542287 POGKQ9P215 609 aa7.85□□□□□ -1.15
ATXN2-215ENST00000542287 STK26Q9P289 416 aa7.85□□□□□ -1.15
ATXN2-215ENST00000542287 ATP7BP35670 1465 aa7.85□□□□□ -1.15
ATXN2-215ENST00000542287 AKAP12Q02952 1782 aa7.85□□□□□ -1.15
ATXN2-215ENST00000542287 TMC1Q8TDI8 760 aa7.85□□□□□ -1.15
ATXN2-215ENST00000542287 TRAK1Q9UPV9 953 aa7.85□□□□□ -1.15
ATXN2-215ENST00000542287 MAPK8IP2Q13387 824 aaPredicted RBP7.84□□□□□ -1.15
ATXN2-215ENST00000542287 RGPD8O14715 1765 aaPredicted RBP7.84□□□□□ -1.15
ATXN2-215ENST00000542287 TRPM3Q9HCF6 1732 aaPredicted RBP7.84□□□□□ -1.15
ATXN2-215ENST00000542287 UBAP1LF5GYI3 381 aa7.84□□□□□ -1.15
ATXN2-215ENST00000542287 WAPLQ7Z5K2 1190 aa7.84□□□□□ -1.15
ATXN2-215ENST00000542287 SLAIN2Q9P270 581 aa7.84□□□□□ -1.15
ATXN2-215ENST00000542287 MYBBP1AQ9BQG0 1328 aaKnown RBP7.84□□□□□ -1.15
ATXN2-215ENST00000542287 WASLO00401 505 aaPredicted RBP7.84□□□□□ -1.16
ATXN2-215ENST00000542287 CC2D1BQ5T0F9 858 aaKnown RBP7.84□□□□□ -1.16
ATXN2-215ENST00000542287 PANK3Q9H999 370 aa7.84□□□□□ -1.16
ATXN2-215ENST00000542287 NINLQ9Y2I6 1382 aa7.84□□□□□ -1.16
ATXN2-215ENST00000542287 PARD3Q8TEW0 1356 aa7.83□□□□□ -1.16
ATXN2-215ENST00000542287 PXDNQ92626 1479 aa7.83□□□□□ -1.16
ATXN2-215ENST00000542287 MON2Q7Z3U7 1717 aa7.83□□□□□ -1.16
ATXN2-215ENST00000542287 TMF1P82094 1093 aa7.82□□□□□ -1.16
ATXN2-215ENST00000542287 RALBP1Q15311 655 aa7.82□□□□□ -1.16
ATXN2-215ENST00000542287 C14orf37Q86TY3 774 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms