RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 INSRP06213 1382 aa19.32■□□□□ 0.68
DDX55-209ENST00000542286 VGFO15240 615 aaPredicted RBP19.32■□□□□ 0.68
DDX55-209ENST00000542286 CFAP74Q9C0B2 1584 aa19.32■□□□□ 0.68
DDX55-209ENST00000542286 SRPK2P78362 688 aaKnown RBP19.31■□□□□ 0.68
DDX55-209ENST00000542286 PDE4AP27815 886 aa19.31■□□□□ 0.68
DDX55-209ENST00000542286 IL27Q8NEV9 243 aa19.3■□□□□ 0.68
DDX55-209ENST00000542286 GLI2P10070 1586 aa19.29■□□□□ 0.68
DDX55-209ENST00000542286 GGNBP2Q9H3C7 697 aa19.29■□□□□ 0.68
DDX55-209ENST00000542286 SBNO2Q9Y2G9 1366 aa19.29■□□□□ 0.68
DDX55-209ENST00000542286 NEO1Q92859 1461 aa19.29■□□□□ 0.68
DDX55-209ENST00000542286 MYO5BQ9ULV0 1848 aa19.29■□□□□ 0.68
DDX55-209ENST00000542286 MYO3AQ8NEV4 1616 aa19.29■□□□□ 0.68
DDX55-209ENST00000542286 NEXMIFQ5QGS0 1516 aa19.28■□□□□ 0.68
DDX55-209ENST00000542286 WWC1Q8IX03 1113 aa19.28■□□□□ 0.68
DDX55-209ENST00000542286 BCL2L13Q9BXK5 485 aa19.28■□□□□ 0.68
DDX55-209ENST00000542286 FBLN1P23142 703 aa19.27■□□□□ 0.68
DDX55-209ENST00000542286 PRAM1Q96QH2 718 aa19.27■□□□□ 0.68
DDX55-209ENST00000542286 SETBP1Q9Y6X0 1596 aa19.27■□□□□ 0.68
DDX55-209ENST00000542286 TSPOAP1O95153 1857 aa19.27■□□□□ 0.68
DDX55-209ENST00000542286 TULP4Q9NRJ4 1543 aa19.27■□□□□ 0.68
DDX55-209ENST00000542286 RPGRIP1LQ68CZ1 1315 aa19.27■□□□□ 0.68
DDX55-209ENST00000542286 TRMT2AQ8IZ69 625 aaKnown RBP19.27■□□□□ 0.67
DDX55-209ENST00000542286 TCP11L2Q8N4U5 519 aa19.27■□□□□ 0.67
DDX55-209ENST00000542286 EVC2Q86UK5 1308 aa19.26■□□□□ 0.67
DDX55-209ENST00000542286 RICTORQ6R327 1708 aa19.26■□□□□ 0.67
DDX55-209ENST00000542286 STAG3Q9UJ98 1225 aa19.26■□□□□ 0.67
DDX55-209ENST00000542286 TNNQ9UQP3 1299 aa19.26■□□□□ 0.67
DDX55-209ENST00000542286 ZC3H13Q5T200 1668 aaKnown RBP19.25■□□□□ 0.67
DDX55-209ENST00000542286 TCERG1O14776 1098 aaKnown RBP19.25■□□□□ 0.67
DDX55-209ENST00000542286 FRAT1Q92837 279 aaPredicted RBP19.25■□□□□ 0.67
DDX55-209ENST00000542286 PIK3C2BO00750 1634 aa19.24■□□□□ 0.67
DDX55-209ENST00000542286 SLC24A1O60721 1099 aa19.24■□□□□ 0.67
DDX55-209ENST00000542286 PANK1Q8TE04 598 aa19.24■□□□□ 0.67
DDX55-209ENST00000542286 CGNL1Q0VF96 1302 aa19.24■□□□□ 0.67
DDX55-209ENST00000542286 RTN4Q9NQC3 1192 aaKnown RBP19.24■□□□□ 0.67
DDX55-209ENST00000542286 U2AF1L5P0DN76 240 aaPredicted RBP19.23■□□□□ 0.67
DDX55-209ENST00000542286 RGS3P49796 1198 aa19.23■□□□□ 0.67
DDX55-209ENST00000542286 U2AF1Q01081 240 aaKnown RBP eCLIP19.23■□□□□ 0.67
DDX55-209ENST00000542286 POGKQ9P215 609 aa19.23■□□□□ 0.67
DDX55-209ENST00000542286 POLR3AO14802 1390 aaPredicted RBP19.23■□□□□ 0.67
DDX55-209ENST00000542286 BACH2Q9BYV9 841 aa19.23■□□□□ 0.67
DDX55-209ENST00000542286 E9PSI1 815 aa19.22■□□□□ 0.67
DDX55-209ENST00000542286 NKTRP30414 1462 aaKnown RBP19.22■□□□□ 0.67
DDX55-209ENST00000542286 ARHGEF28Q8N1W1 1705 aaKnown RBP19.22■□□□□ 0.67
DDX55-209ENST00000542286 A0A1W2PP64 1363 aa19.21■□□□□ 0.67
DDX55-209ENST00000542286 WAPLQ7Z5K2 1190 aa19.21■□□□□ 0.67
DDX55-209ENST00000542286 KDM2BQ8NHM5 1336 aa19.21■□□□□ 0.67
DDX55-209ENST00000542286 U2SURPO15042 1029 aaKnown RBP19.21■□□□□ 0.67
DDX55-209ENST00000542286 COG6Q9Y2V7 657 aa19.21■□□□□ 0.67
DDX55-209ENST00000542286 SLC52A1Q9NWF4 448 aa19.2■□□□□ 0.66
DDX55-209ENST00000542286 SHPRHQ149N8 1683 aa19.2■□□□□ 0.66
DDX55-209ENST00000542286 CANXP27824 592 aaKnown RBP19.19■□□□□ 0.66
DDX55-209ENST00000542286 RUNDC1Q96C34 613 aa19.19■□□□□ 0.66
DDX55-209ENST00000542286 CLUAP1Q96AJ1 413 aa19.18■□□□□ 0.66
DDX55-209ENST00000542286 ANKRD36BQ8N2N9 1353 aa19.17■□□□□ 0.66
DDX55-209ENST00000542286 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.17■□□□□ 0.66
DDX55-209ENST00000542286 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.17■□□□□ 0.66
DDX55-209ENST00000542286 IGHDP01880 384 aa19.16■□□□□ 0.66
DDX55-209ENST00000542286 CABP1Q9NZU7 370 aa19.16■□□□□ 0.66
DDX55-209ENST00000542286 TSR2Q969E8 191 aaKnown RBP19.16■□□□□ 0.66
DDX55-209ENST00000542286 PPM1GO15355 546 aaPredicted RBP19.15■□□□□ 0.66
DDX55-209ENST00000542286 PREX1Q8TCU6 1659 aa19.15■□□□□ 0.66
DDX55-209ENST00000542286 CDK19Q9BWU1 502 aa19.15■□□□□ 0.66
DDX55-209ENST00000542286 ARHGAP31Q2M1Z3 1444 aa19.14■□□□□ 0.66
DDX55-209ENST00000542286 FYB1O15117 783 aa19.14■□□□□ 0.65
DDX55-209ENST00000542286 SLC4A3P48751 1232 aa19.14■□□□□ 0.65
DDX55-209ENST00000542286 CFAP53Q96M91 514 aa19.14■□□□□ 0.65
DDX55-209ENST00000542286 LAS1LQ9Y4W2 734 aaKnown RBP19.14■□□□□ 0.65
DDX55-209ENST00000542286 RLBP1P12271 317 aa19.14■□□□□ 0.65
DDX55-209ENST00000542286 TMEM131LA2VDJ0 1609 aa19.14■□□□□ 0.65
DDX55-209ENST00000542286 NCKAP5LQ9HCH0 1330 aa19.14■□□□□ 0.65
DDX55-209ENST00000542286 YTHDC2Q9H6S0 1430 aaKnown RBP19.13■□□□□ 0.65
DDX55-209ENST00000542286 PTPRMP28827 1452 aa19.12■□□□□ 0.65
DDX55-209ENST00000542286 CENPQQ7L2Z9 268 aaPredicted RBP19.12■□□□□ 0.65
DDX55-209ENST00000542286 PLPPR3Q6T4P5 718 aa19.11■□□□□ 0.65
DDX55-209ENST00000542286 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.11■□□□□ 0.65
DDX55-209ENST00000542286 NEFMP07197 916 aa19.1■□□□□ 0.65
DDX55-209ENST00000542286 MS4A1P11836 297 aa19.1■□□□□ 0.65
DDX55-209ENST00000542286 RARSP54136 660 aaKnown RBP19.1■□□□□ 0.65
DDX55-209ENST00000542286 RIMBP3CA6NJZ7 1639 aa19.1■□□□□ 0.65
DDX55-209ENST00000542286 RIMBP3BA6NNM3 1639 aa19.1■□□□□ 0.65
DDX55-209ENST00000542286 RIMBP3Q9UFD9 1639 aa19.1■□□□□ 0.65
DDX55-209ENST00000542286 ZRANB1Q9UGI0 708 aa19.09■□□□□ 0.65
DDX55-209ENST00000542286 IQSEC2Q5JU85 1478 aa19.08■□□□□ 0.65
DDX55-209ENST00000542286 CD163L1Q9NR16 1453 aa19.07■□□□□ 0.64
DDX55-209ENST00000542286 ABCC11Q96J66 1382 aa19.07■□□□□ 0.64
DDX55-209ENST00000542286 USP35Q9P2H5 1018 aa19.07■□□□□ 0.64
DDX55-209ENST00000542286 TXNDC2Q86VQ3 553 aa19.06■□□□□ 0.64
DDX55-209ENST00000542286 PHF23Q9BUL5 403 aaPredicted RBP19.06■□□□□ 0.64
DDX55-209ENST00000542286 DIP2BQ9P265 1576 aa19.06■□□□□ 0.64
DDX55-209ENST00000542286 ALKQ9UM73 1620 aa19.06■□□□□ 0.64
DDX55-209ENST00000542286 C8orf34Q49A92 452 aa19.05■□□□□ 0.64
DDX55-209ENST00000542286 TERF2IPQ9NYB0 399 aa19.05■□□□□ 0.64
DDX55-209ENST00000542286 CLTCQ00610 1675 aaKnown RBP19.05■□□□□ 0.64
DDX55-209ENST00000542286 NUTM2FA1L443 756 aa19.04■□□□□ 0.64
DDX55-209ENST00000542286 ZFYVE9O95405 1425 aa19.04■□□□□ 0.64
DDX55-209ENST00000542286 PCDHB15Q9Y5E8 787 aa19.04■□□□□ 0.64
DDX55-209ENST00000542286 EXOSC9Q06265 439 aaKnown RBP19.03■□□□□ 0.64
DDX55-209ENST00000542286 PLEKHF1Q96S99 279 aa19.03■□□□□ 0.64
DDX55-209ENST00000542286 TRIM35Q9UPQ4 493 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms