RNA–Protein interactions for RNA: ENST00000542139.1

RAD9A-207, Transcript of RAD9 checkpoint clamp component A, humanhuman

TSL 4

Gene RAD9A, Length 578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-207ENST00000542139 ESCO1Q5FWF5 840 aa23.24■■□□□ 1.31
RAD9A-207ENST00000542139 ROBO2Q9HCK4 1378 aa23.24■■□□□ 1.31
RAD9A-207ENST00000542139 MYOM2P54296 1465 aa23.24■■□□□ 1.31
RAD9A-207ENST00000542139 NEXMIFQ5QGS0 1516 aa23.23■■□□□ 1.31
RAD9A-207ENST00000542139 VGFO15240 615 aaPredicted RBP23.21■■□□□ 1.31
RAD9A-207ENST00000542139 HFM1A2PYH4 1435 aa23.19■■□□□ 1.3
RAD9A-207ENST00000542139 XPCQ01831 940 aaPredicted RBP23.19■■□□□ 1.3
RAD9A-207ENST00000542139 DEFB132Q7Z7B7 95 aa23.19■■□□□ 1.3
RAD9A-207ENST00000542139 MARF1Q9Y4F3 1742 aaKnown RBP23.19■■□□□ 1.3
RAD9A-207ENST00000542139 LRPPRCP42704 1394 aaKnown RBP23.18■■□□□ 1.3
RAD9A-207ENST00000542139 UNC5CLQ8IV45 518 aa23.18■■□□□ 1.3
RAD9A-207ENST00000542139 FOXO3O43524 673 aa23.17■■□□□ 1.3
RAD9A-207ENST00000542139 CLTCL1P53675 1640 aa23.17■■□□□ 1.3
RAD9A-207ENST00000542139 KIF1BO60333 1816 aa23.16■■□□□ 1.3
RAD9A-207ENST00000542139 RALGAPBQ86X10 1494 aa23.16■■□□□ 1.3
RAD9A-207ENST00000542139 PXDNQ92626 1479 aa23.15■■□□□ 1.3
RAD9A-207ENST00000542139 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.13■■□□□ 1.29
RAD9A-207ENST00000542139 HAP1P54257 671 aaPredicted RBP23.13■■□□□ 1.29
RAD9A-207ENST00000542139 GLI3P10071 1580 aa23.11■■□□□ 1.29
RAD9A-207ENST00000542139 PRAG1Q86YV5 1406 aa23.11■■□□□ 1.29
RAD9A-207ENST00000542139 SEPT12Q8IYM1 358 aa23.11■■□□□ 1.29
RAD9A-207ENST00000542139 LRP5O75197 1615 aa23.11■■□□□ 1.29
RAD9A-207ENST00000542139 NUTM2FA1L443 756 aa23.1■■□□□ 1.29
RAD9A-207ENST00000542139 CCDC9Q9Y3X0 531 aaKnown RBP23.1■■□□□ 1.29
RAD9A-207ENST00000542139 CDC42BPGQ6DT37 1551 aa23.1■■□□□ 1.29
RAD9A-207ENST00000542139 RPGRIP1LQ68CZ1 1315 aa23.08■■□□□ 1.29
RAD9A-207ENST00000542139 SLIT2O94813 1529 aa23.08■■□□□ 1.29
RAD9A-207ENST00000542139 PSDA5PKW4 1024 aaPredicted RBP23.07■■□□□ 1.28
RAD9A-207ENST00000542139 BAG6P46379 1132 aa23.07■■□□□ 1.28
RAD9A-207ENST00000542139 BRWD3Q6RI45 1802 aa23.06■■□□□ 1.28
RAD9A-207ENST00000542139 A0A0G2JS52 829 aa23.06■■□□□ 1.28
RAD9A-207ENST00000542139 MYT1Q01538 1121 aa23.06■■□□□ 1.28
RAD9A-207ENST00000542139 KRT27Q7Z3Y8 459 aa23.06■■□□□ 1.28
RAD9A-207ENST00000542139 NAIPQ13075 1403 aa23.05■■□□□ 1.28
RAD9A-207ENST00000542139 SPATA31A3Q5VYP0 1347 aa23.05■■□□□ 1.28
RAD9A-207ENST00000542139 VPS72Q15906 364 aa23.04■■□□□ 1.28
RAD9A-207ENST00000542139 STK26Q9P289 416 aa23.03■■□□□ 1.28
RAD9A-207ENST00000542139 CCDC144AA2RUR9 1427 aa23.02■■□□□ 1.28
RAD9A-207ENST00000542139 PLEKHG5O94827 1062 aa23.02■■□□□ 1.28
RAD9A-207ENST00000542139 USP32Q8NFA0 1604 aa23.01■■□□□ 1.27
RAD9A-207ENST00000542139 HRCP23327 699 aa23.01■■□□□ 1.27
RAD9A-207ENST00000542139 KRT28Q7Z3Y7 464 aa23.01■■□□□ 1.27
RAD9A-207ENST00000542139 WAPLQ7Z5K2 1190 aa22.99■■□□□ 1.27
RAD9A-207ENST00000542139 PSME1Q06323 249 aa22.98■■□□□ 1.27
RAD9A-207ENST00000542139 LMOD2Q6P5Q4 547 aa22.97■■□□□ 1.27
RAD9A-207ENST00000542139 KIF1AQ12756 1690 aa22.97■■□□□ 1.27
RAD9A-207ENST00000542139 ONECUT3O60422 494 aaPredicted RBP22.96■■□□□ 1.27
RAD9A-207ENST00000542139 CABLES1Q8TDN4 633 aa22.96■■□□□ 1.27
RAD9A-207ENST00000542139 PPLO60437 1756 aa22.96■■□□□ 1.27
RAD9A-207ENST00000542139 TNS3Q68CZ2 1445 aa22.94■■□□□ 1.26
RAD9A-207ENST00000542139 NWD2Q9ULI1 1742 aa22.93■■□□□ 1.26
RAD9A-207ENST00000542139 PLCH1Q4KWH8 1693 aa22.93■■□□□ 1.26
RAD9A-207ENST00000542139 EN1Q05925 392 aaPredicted RBP22.92■■□□□ 1.26
RAD9A-207ENST00000542139 R3HDM1Q15032 1099 aaKnown RBP22.91■■□□□ 1.26
RAD9A-207ENST00000542139 FAM98CQ17RN3 349 aaKnown RBP22.91■■□□□ 1.26
RAD9A-207ENST00000542139 PHF8Q9UPP1 1060 aa22.91■■□□□ 1.26
RAD9A-207ENST00000542139 FMN2Q9NZ56 1722 aa22.91■■□□□ 1.26
RAD9A-207ENST00000542139 TECPR2O15040 1411 aa22.91■■□□□ 1.26
RAD9A-207ENST00000542139 SLC4A1APQ9BWU0 796 aaKnown RBP22.9■■□□□ 1.26
RAD9A-207ENST00000542139 PLEKHH1Q9ULM0 1364 aa22.89■■□□□ 1.26
RAD9A-207ENST00000542139 ADGRF5Q8IZF2 1346 aa22.89■■□□□ 1.26
RAD9A-207ENST00000542139 ARHGEF10O15013 1369 aa22.89■■□□□ 1.25
RAD9A-207ENST00000542139 ABCC11Q96J66 1382 aa22.89■■□□□ 1.25
RAD9A-207ENST00000542139 TMEM132EQ6IEE7 984 aa22.88■■□□□ 1.25
RAD9A-207ENST00000542139 RRBP1Q9P2E9 1410 aaKnown RBP22.88■■□□□ 1.25
RAD9A-207ENST00000542139 RGL3Q3MIN7 710 aa22.86■■□□□ 1.25
RAD9A-207ENST00000542139 PPARGC1BQ86YN6 1023 aaKnown RBP22.86■■□□□ 1.25
RAD9A-207ENST00000542139 SBNO1A3KN83 1393 aa22.86■■□□□ 1.25
RAD9A-207ENST00000542139 FAM83GA6ND36 823 aa22.85■■□□□ 1.25
RAD9A-207ENST00000542139 BTG4Q9NY30 223 aa22.85■■□□□ 1.25
RAD9A-207ENST00000542139 RGPD1P0DJD0 1748 aa22.85■■□□□ 1.25
RAD9A-207ENST00000542139 KNDC1Q76NI1 1749 aa22.84■■□□□ 1.25
RAD9A-207ENST00000542139 ANKRD30BQ9BXX2 1392 aa22.82■■□□□ 1.24
RAD9A-207ENST00000542139 FAM182BQ5T319 152 aa22.82■■□□□ 1.24
RAD9A-207ENST00000542139 YY1P25490 414 aa22.81■■□□□ 1.24
RAD9A-207ENST00000542139 YTHDC2Q9H6S0 1430 aaKnown RBP22.81■■□□□ 1.24
RAD9A-207ENST00000542139 ABCA3Q99758 1704 aa22.8■■□□□ 1.24
RAD9A-207ENST00000542139 IFT172Q9UG01 1749 aa22.79■■□□□ 1.24
RAD9A-207ENST00000542139 NRXN1Q9ULB1 1477 aa22.79■■□□□ 1.24
RAD9A-207ENST00000542139 RGPD8O14715 1765 aaPredicted RBP22.79■■□□□ 1.24
RAD9A-207ENST00000542139 EZH2Q15910 746 aaKnown RBP22.79■■□□□ 1.24
RAD9A-207ENST00000542139 PMFBP1Q8TBY8 1022 aa22.77■■□□□ 1.24
RAD9A-207ENST00000542139 SIRT1Q96EB6 747 aa22.77■■□□□ 1.24
RAD9A-207ENST00000542139 NRAPQ86VF7 1730 aa22.77■■□□□ 1.23
RAD9A-207ENST00000542139 DISP2A7MBM2 1401 aa22.76■■□□□ 1.23
RAD9A-207ENST00000542139 DCAF8L1A6NGE4 600 aa22.75■■□□□ 1.23
RAD9A-207ENST00000542139 SAFB2Q14151 953 aaKnown RBP eCLIP22.75■■□□□ 1.23
RAD9A-207ENST00000542139 PIK3C2GO75747 1445 aa22.74■■□□□ 1.23
RAD9A-207ENST00000542139 COL14A1Q05707 1796 aaKnown RBP22.74■■□□□ 1.23
RAD9A-207ENST00000542139 ADGRB2O60241 1585 aa22.74■■□□□ 1.23
RAD9A-207ENST00000542139 SPATA31A5Q5VU36 1347 aa22.74■■□□□ 1.23
RAD9A-207ENST00000542139 SPATA31A7Q8IWB4 1347 aa22.74■■□□□ 1.23
RAD9A-207ENST00000542139 DHX57Q6P158 1386 aaKnown RBP22.73■■□□□ 1.23
RAD9A-207ENST00000542139 TRIM37O94972 964 aa22.72■■□□□ 1.23
RAD9A-207ENST00000542139 GPRASP1Q5JY77 1395 aa22.72■■□□□ 1.23
RAD9A-207ENST00000542139 APBA3O96018 575 aa22.71■■□□□ 1.23
RAD9A-207ENST00000542139 FAM196AQ6ZSG2 479 aa22.71■■□□□ 1.23
RAD9A-207ENST00000542139 PRAM1Q96QH2 718 aa22.71■■□□□ 1.23
RAD9A-207ENST00000542139 POGKQ9P215 609 aa22.71■■□□□ 1.23
RAD9A-207ENST00000542139 SPATA31E1Q6ZUB1 1445 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms