RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 MAP3K4Q9Y6R4 1608 aa8.72□□□□□ -1.01
CDKN3-206ENST00000541304 NEO1Q92859 1461 aa8.72□□□□□ -1.01
CDKN3-206ENST00000541304 RBM33Q96EV2 1170 aaKnown RBP8.72□□□□□ -1.01
CDKN3-206ENST00000541304 CD109Q6YHK3 1445 aa8.71□□□□□ -1.01
CDKN3-206ENST00000541304 KIAA1107Q9UPP5 1409 aa8.71□□□□□ -1.01
CDKN3-206ENST00000541304 ARHGAP5Q13017 1502 aa8.71□□□□□ -1.01
CDKN3-206ENST00000541304 RSPH4AQ5TD94 716 aa8.71□□□□□ -1.02
CDKN3-206ENST00000541304 CDC42BPAQ5VT25 1732 aa8.71□□□□□ -1.02
CDKN3-206ENST00000541304 PTPN23Q9H3S7 1636 aa8.7□□□□□ -1.02
CDKN3-206ENST00000541304 MAP3K7O43318 606 aa8.7□□□□□ -1.02
CDKN3-206ENST00000541304 PTPN5P54829 565 aa8.7□□□□□ -1.02
CDKN3-206ENST00000541304 EFCAB2Q5VUJ9 269 aa8.7□□□□□ -1.02
CDKN3-206ENST00000541304 CFDP1Q9UEE9 299 aaPredicted RBP8.7□□□□□ -1.02
CDKN3-206ENST00000541304 FANCAO15360 1455 aa8.7□□□□□ -1.02
CDKN3-206ENST00000541304 ONECUT3O60422 494 aaPredicted RBP8.69□□□□□ -1.02
CDKN3-206ENST00000541304 TRIM26Q12899 539 aaPredicted RBP8.69□□□□□ -1.02
CDKN3-206ENST00000541304 LAPTM4BQ86VI4 370 aa8.69□□□□□ -1.02
CDKN3-206ENST00000541304 CAMSAP2Q08AD1 1489 aa8.69□□□□□ -1.02
CDKN3-206ENST00000541304 ARHGEF5Q12774 1597 aa8.69□□□□□ -1.02
CDKN3-206ENST00000541304 TRIM6-TRIM34B2RNG4 842 aa8.68□□□□□ -1.02
CDKN3-206ENST00000541304 ANKK1Q8NFD2 765 aa8.68□□□□□ -1.02
CDKN3-206ENST00000541304 SHANK2Q9UPX8 1470 aa8.68□□□□□ -1.02
CDKN3-206ENST00000541304 ABCC1P33527 1531 aa8.68□□□□□ -1.02
CDKN3-206ENST00000541304 TSR1Q2NL82 804 aaKnown RBP8.67□□□□□ -1.02
CDKN3-206ENST00000541304 AKNAQ7Z591 1439 aa8.67□□□□□ -1.02
CDKN3-206ENST00000541304 ACIN1Q9UKV3 1341 aaKnown RBP8.67□□□□□ -1.02
CDKN3-206ENST00000541304 CDC42BPBQ9Y5S2 1711 aa8.67□□□□□ -1.02
CDKN3-206ENST00000541304 CCDC141Q6ZP82 1450 aa8.66□□□□□ -1.02
CDKN3-206ENST00000541304 FAM69CQ0P6D2 419 aa8.66□□□□□ -1.02
CDKN3-206ENST00000541304 KIAA1468Q9P260 1216 aa8.66□□□□□ -1.02
CDKN3-206ENST00000541304 KIF13AQ9H1H9 1805 aa8.66□□□□□ -1.02
CDKN3-206ENST00000541304 DNMT1P26358 1616 aaKnown RBP8.65□□□□□ -1.02
CDKN3-206ENST00000541304 SAMD9LQ8IVG5 1584 aa8.65□□□□□ -1.02
CDKN3-206ENST00000541304 ADGRL1O94910 1474 aa8.65□□□□□ -1.02
CDKN3-206ENST00000541304 ZNF518AQ6AHZ1 1483 aa8.65□□□□□ -1.02
CDKN3-206ENST00000541304 GRXCR2A6NFK2 248 aa8.65□□□□□ -1.02
CDKN3-206ENST00000541304 TSHZ2Q9NRE2 1034 aa8.64□□□□□ -1.03
CDKN3-206ENST00000541304 SEPT9Q9UHD8 586 aaPredicted RBP8.64□□□□□ -1.03
CDKN3-206ENST00000541304 MAST1Q9Y2H9 1570 aa8.64□□□□□ -1.03
CDKN3-206ENST00000541304 SYCP2Q9BX26 1530 aa8.64□□□□□ -1.03
CDKN3-206ENST00000541304 DAPK1P53355 1430 aa8.63□□□□□ -1.03
CDKN3-206ENST00000541304 ROCK1Q13464 1354 aa8.63□□□□□ -1.03
CDKN3-206ENST00000541304 CROCC2H7BZ55 1655 aa8.63□□□□□ -1.03
CDKN3-206ENST00000541304 FAM98CQ17RN3 349 aaKnown RBP8.63□□□□□ -1.03
CDKN3-206ENST00000541304 CERKQ8TCT0 537 aa8.63□□□□□ -1.03
CDKN3-206ENST00000541304 ZFRQ96KR1 1074 aaKnown RBP8.63□□□□□ -1.03
CDKN3-206ENST00000541304 ADGRL2O95490 1459 aa8.63□□□□□ -1.03
CDKN3-206ENST00000541304 MBD5Q9P267 1494 aa8.63□□□□□ -1.03
CDKN3-206ENST00000541304 RTEL1-TNFRSF6BF6WH68 1400 aa8.63□□□□□ -1.03
CDKN3-206ENST00000541304 POGZQ7Z3K3 1410 aa8.63□□□□□ -1.03
CDKN3-206ENST00000541304 KDM5CP41229 1560 aa8.62□□□□□ -1.03
CDKN3-206ENST00000541304 PPARGC1BQ86YN6 1023 aaKnown RBP8.62□□□□□ -1.03
CDKN3-206ENST00000541304 DENND4BO75064 1496 aaPredicted RBP8.62□□□□□ -1.03
CDKN3-206ENST00000541304 MAGI2Q86UL8 1455 aa8.62□□□□□ -1.03
CDKN3-206ENST00000541304 PPRC1Q5VV67 1664 aaKnown RBP8.62□□□□□ -1.03
CDKN3-206ENST00000541304 PLXNC1O60486 1568 aa8.61□□□□□ -1.03
CDKN3-206ENST00000541304 ZMYM4Q5VZL5 1548 aa8.61□□□□□ -1.03
CDKN3-206ENST00000541304 SOWAHBA6NEL2 793 aa8.61□□□□□ -1.03
CDKN3-206ENST00000541304 TSPY4P0CV99 314 aa8.61□□□□□ -1.03
CDKN3-206ENST00000541304 TSPY10P0CW01 314 aa8.61□□□□□ -1.03
CDKN3-206ENST00000541304 PRIM1P49642 420 aaKnown RBP8.61□□□□□ -1.03
CDKN3-206ENST00000541304 BCAMP50895 628 aa8.61□□□□□ -1.03
CDKN3-206ENST00000541304 FAM50AQ14320 339 aaKnown RBP8.61□□□□□ -1.03
CDKN3-206ENST00000541304 TSKSQ9UJT2 592 aa8.61□□□□□ -1.03
CDKN3-206ENST00000541304 SCAPERQ9BY12 1400 aa8.61□□□□□ -1.03
CDKN3-206ENST00000541304 ANKRD30AQ9BXX3 1397 aa8.61□□□□□ -1.03
CDKN3-206ENST00000541304 ADGBQ8N7X0 1667 aa8.6□□□□□ -1.03
CDKN3-206ENST00000541304 PACS2Q86VP3 889 aa8.6□□□□□ -1.03
CDKN3-206ENST00000541304 ZNF777Q9ULD5 760 aaPredicted RBP8.6□□□□□ -1.03
CDKN3-206ENST00000541304 ABCC5O15440 1437 aa8.6□□□□□ -1.03
CDKN3-206ENST00000541304 C9orf84Q5VXU9 1444 aa8.6□□□□□ -1.03
CDKN3-206ENST00000541304 MLH3Q9UHC1 1453 aa8.59□□□□□ -1.03
CDKN3-206ENST00000541304 OSBPP22059 807 aa8.59□□□□□ -1.03
CDKN3-206ENST00000541304 KCNV2Q8TDN2 545 aa8.59□□□□□ -1.03
CDKN3-206ENST00000541304 ARHGEF1Q92888 912 aaKnown RBP8.59□□□□□ -1.03
CDKN3-206ENST00000541304 CDCA7LQ96GN5 454 aa8.59□□□□□ -1.03
CDKN3-206ENST00000541304 CDHR5Q9HBB8 845 aa8.59□□□□□ -1.03
CDKN3-206ENST00000541304 HFM1A2PYH4 1435 aa8.59□□□□□ -1.03
CDKN3-206ENST00000541304 HECW2Q9P2P5 1572 aa8.59□□□□□ -1.03
CDKN3-206ENST00000541304 INO80Q9ULG1 1556 aaPredicted RBP8.59□□□□□ -1.03
CDKN3-206ENST00000541304 NBPF26B4DH59 902 aa8.58□□□□□ -1.04
CDKN3-206ENST00000541304 PRSS12P56730 875 aa8.58□□□□□ -1.04
CDKN3-206ENST00000541304 IFFO2Q5TF58 517 aa8.58□□□□□ -1.04
CDKN3-206ENST00000541304 NYAP1Q6ZVC0 841 aa8.58□□□□□ -1.04
CDKN3-206ENST00000541304 RBM27Q9P2N5 1060 aaKnown RBP8.58□□□□□ -1.04
CDKN3-206ENST00000541304 ATP7AQ04656 1500 aa8.58□□□□□ -1.04
CDKN3-206ENST00000541304 ZFYVE16Q7Z3T8 1539 aa8.58□□□□□ -1.04
CDKN3-206ENST00000541304 ARHGEF12Q9NZN5 1544 aa8.58□□□□□ -1.04
CDKN3-206ENST00000541304 LRCH3Q96II8 777 aa8.57□□□□□ -1.04
CDKN3-206ENST00000541304 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.57□□□□□ -1.04
CDKN3-206ENST00000541304 RICTORQ6R327 1708 aa8.57□□□□□ -1.04
CDKN3-206ENST00000541304 SPAG9O60271 1321 aaKnown RBP8.56□□□□□ -1.04
CDKN3-206ENST00000541304 ZNF644Q9H582 1327 aaPredicted RBP8.56□□□□□ -1.04
CDKN3-206ENST00000541304 GCC2Q8IWJ2 1684 aa8.56□□□□□ -1.04
CDKN3-206ENST00000541304 ERBINQ96RT1 1412 aa8.56□□□□□ -1.04
CDKN3-206ENST00000541304 TRAPPC8Q9Y2L5 1435 aa8.56□□□□□ -1.04
CDKN3-206ENST00000541304 HRCP23327 699 aa8.56□□□□□ -1.04
CDKN3-206ENST00000541304 REREQ9P2R6 1566 aa8.56□□□□□ -1.04
CDKN3-206ENST00000541304 NCOA1Q15788 1441 aa8.55□□□□□ -1.04
CDKN3-206ENST00000541304 DUOX2Q9NRD8 1548 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms