RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 TMEM131LA2VDJ0 1609 aa14.99□□□□□ -0.01
LGR5-203ENST00000540815 USP32Q8NFA0 1604 aa14.97□□□□□ -0.01
LGR5-203ENST00000540815 AGLP35573 1532 aa14.96□□□□□ -0.01
LGR5-203ENST00000540815 PUS7Q96PZ0 661 aaKnown RBP14.96□□□□□ -0.02
LGR5-203ENST00000540815 FBXO31Q5XUX0 539 aaPredicted RBP14.95□□□□□ -0.02
LGR5-203ENST00000540815 TULP4Q9NRJ4 1543 aa14.94□□□□□ -0.02
LGR5-203ENST00000540815 ZBTB47Q9UFB7 747 aaPredicted RBP14.94□□□□□ -0.02
LGR5-203ENST00000540815 NSD3Q9BZ95 1437 aa14.94□□□□□ -0.02
LGR5-203ENST00000540815 SLC12A5Q9H2X9 1139 aa14.93□□□□□ -0.02
LGR5-203ENST00000540815 PLEKHH1Q9ULM0 1364 aa14.93□□□□□ -0.02
LGR5-203ENST00000540815 ZNF521Q96K83 1311 aa14.92□□□□□ -0.02
LGR5-203ENST00000540815 PPP6R1Q9UPN7 881 aa14.92□□□□□ -0.02
LGR5-203ENST00000540815 SENP3Q9H4L4 574 aaPredicted RBP14.92□□□□□ -0.02
LGR5-203ENST00000540815 EVC2Q86UK5 1308 aa14.91□□□□□ -0.02
LGR5-203ENST00000540815 POLR3AO14802 1390 aaPredicted RBP14.91□□□□□ -0.02
LGR5-203ENST00000540815 KIF13AQ9H1H9 1805 aa14.91□□□□□ -0.02
LGR5-203ENST00000540815 BRPF3Q9ULD4 1205 aa14.91□□□□□ -0.02
LGR5-203ENST00000540815 IPO9Q96P70 1041 aaKnown RBP14.9□□□□□ -0.02
LGR5-203ENST00000540815 CLTCQ00610 1675 aaKnown RBP14.9□□□□□ -0.02
LGR5-203ENST00000540815 ANP32AP39687 249 aaKnown RBP14.88□□□□□ -0.03
LGR5-203ENST00000540815 SHPRHQ149N8 1683 aa14.88□□□□□ -0.03
LGR5-203ENST00000540815 EXOC6Q8TAG9 804 aa14.88□□□□□ -0.03
LGR5-203ENST00000540815 ANKRD36BQ8N2N9 1353 aa14.88□□□□□ -0.03
LGR5-203ENST00000540815 PTPRMP28827 1452 aa14.87□□□□□ -0.03
LGR5-203ENST00000540815 NEFMP07197 916 aa14.87□□□□□ -0.03
LGR5-203ENST00000540815 GOLGA2Q08379 1002 aa14.87□□□□□ -0.03
LGR5-203ENST00000540815 DUSP27Q5VZP5 1158 aa14.87□□□□□ -0.03
LGR5-203ENST00000540815 MORC1Q86VD1 984 aa14.87□□□□□ -0.03
LGR5-203ENST00000540815 SPATA31D1Q6ZQQ2 1576 aa14.87□□□□□ -0.03
LGR5-203ENST00000540815 CCDC146Q8IYE0 955 aa14.86□□□□□ -0.03
LGR5-203ENST00000540815 ALKQ9UM73 1620 aa14.86□□□□□ -0.03
LGR5-203ENST00000540815 SAFB2Q14151 953 aaKnown RBP eCLIP14.86□□□□□ -0.03
LGR5-203ENST00000540815 NGEFQ8N5V2 710 aa14.86□□□□□ -0.03
LGR5-203ENST00000540815 STK26Q9P289 416 aa14.86□□□□□ -0.03
LGR5-203ENST00000540815 CGNL1Q0VF96 1302 aa14.86□□□□□ -0.03
LGR5-203ENST00000540815 NSD2O96028 1365 aa14.86□□□□□ -0.03
LGR5-203ENST00000540815 NINLQ9Y2I6 1382 aa14.86□□□□□ -0.03
LGR5-203ENST00000540815 ARHGEF40Q8TER5 1519 aa14.86□□□□□ -0.03
LGR5-203ENST00000540815 YTHDC2Q9H6S0 1430 aaKnown RBP14.85□□□□□ -0.03
LGR5-203ENST00000540815 SLFN5Q08AF3 891 aa14.84□□□□□ -0.03
LGR5-203ENST00000540815 CABP2Q9NPB3 220 aa14.84□□□□□ -0.03
LGR5-203ENST00000540815 TRMT2AQ8IZ69 625 aaKnown RBP14.84□□□□□ -0.03
LGR5-203ENST00000540815 UBE2Q2Q8WVN8 375 aa14.84□□□□□ -0.03
LGR5-203ENST00000540815 A2ML1A8K2U0 1454 aa14.83□□□□□ -0.03
LGR5-203ENST00000540815 APAF1O14727 1248 aa14.83□□□□□ -0.04
LGR5-203ENST00000540815 MLECQ14165 292 aa14.83□□□□□ -0.04
LGR5-203ENST00000540815 PLIN1O60240 522 aa14.82□□□□□ -0.04
LGR5-203ENST00000540815 TNNT2P45379 298 aaPredicted RBP14.81□□□□□ -0.04
LGR5-203ENST00000540815 SKAP1Q86WV1 359 aa14.81□□□□□ -0.04
LGR5-203ENST00000540815 SPINK5Q9NQ38 1064 aaPredicted RBP14.81□□□□□ -0.04
LGR5-203ENST00000540815 ATAD2Q6PL18 1390 aa14.81□□□□□ -0.04
LGR5-203ENST00000540815 SETD1AO15047 1707 aaKnown RBP14.8□□□□□ -0.04
LGR5-203ENST00000540815 PRAM1Q96QH2 718 aa14.8□□□□□ -0.04
LGR5-203ENST00000540815 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
LGR5-203ENST00000540815 DLC1Q96QB1 1528 aa14.8□□□□□ -0.04
LGR5-203ENST00000540815 ANKRD26Q9UPS8 1709 aa14.8□□□□□ -0.04
LGR5-203ENST00000540815 ABCC11Q96J66 1382 aa14.79□□□□□ -0.04
LGR5-203ENST00000540815 NKTRP30414 1462 aaKnown RBP14.79□□□□□ -0.04
LGR5-203ENST00000540815 CRBNQ96SW2 442 aa14.79□□□□□ -0.04
LGR5-203ENST00000540815 DMRT2Q9Y5R5 561 aa14.79□□□□□ -0.04
LGR5-203ENST00000540815 A0A1W2PP64 1363 aa14.79□□□□□ -0.04
LGR5-203ENST00000540815 MINK1Q8N4C8 1332 aaPredicted RBP14.79□□□□□ -0.04
LGR5-203ENST00000540815 E9PSI1 815 aa14.79□□□□□ -0.04
LGR5-203ENST00000540815 IQSEC2Q5JU85 1478 aa14.78□□□□□ -0.04
LGR5-203ENST00000540815 CD163L1Q9NR16 1453 aa14.78□□□□□ -0.04
LGR5-203ENST00000540815 SRPK2P78362 688 aaKnown RBP14.78□□□□□ -0.04
LGR5-203ENST00000540815 POGKQ9P215 609 aa14.78□□□□□ -0.04
LGR5-203ENST00000540815 RIMS2Q9UQ26 1411 aa14.78□□□□□ -0.04
LGR5-203ENST00000540815 CFAP53Q96M91 514 aa14.78□□□□□ -0.04
LGR5-203ENST00000540815 SLC4A3P48751 1232 aa14.77□□□□□ -0.04
LGR5-203ENST00000540815 MTHFSP49914 203 aa14.77□□□□□ -0.04
LGR5-203ENST00000540815 C20orf194Q5TEA3 1177 aa14.77□□□□□ -0.05
LGR5-203ENST00000540815 MED14O60244 1454 aa14.77□□□□□ -0.05
LGR5-203ENST00000540815 NRXN3Q9Y4C0 1643 aa14.76□□□□□ -0.05
LGR5-203ENST00000540815 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.76□□□□□ -0.05
LGR5-203ENST00000540815 RUNDC1Q96C34 613 aa14.76□□□□□ -0.05
LGR5-203ENST00000540815 WWC1Q8IX03 1113 aa14.74□□□□□ -0.05
LGR5-203ENST00000540815 TERF2IPQ9NYB0 399 aa14.74□□□□□ -0.05
LGR5-203ENST00000540815 ZMYM3Q14202 1370 aa14.74□□□□□ -0.05
LGR5-203ENST00000540815 NLRP1Q9C000 1473 aa14.74□□□□□ -0.05
LGR5-203ENST00000540815 KIF20BQ96Q89 1820 aa14.73□□□□□ -0.05
LGR5-203ENST00000540815 TCERG1O14776 1098 aaKnown RBP14.73□□□□□ -0.05
LGR5-203ENST00000540815 NCBP3Q53F19 620 aaKnown RBP14.73□□□□□ -0.05
LGR5-203ENST00000540815 CDK19Q9BWU1 502 aa14.73□□□□□ -0.05
LGR5-203ENST00000540815 PHF23Q9BUL5 403 aaPredicted RBP14.72□□□□□ -0.05
LGR5-203ENST00000540815 WAPLQ7Z5K2 1190 aa14.72□□□□□ -0.05
LGR5-203ENST00000540815 ADGRB2O60241 1585 aa14.72□□□□□ -0.05
LGR5-203ENST00000540815 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.71□□□□□ -0.05
LGR5-203ENST00000540815 TCP11L2Q8N4U5 519 aa14.71□□□□□ -0.05
LGR5-203ENST00000540815 GGNBP2Q9H3C7 697 aa14.71□□□□□ -0.05
LGR5-203ENST00000540815 COL3A1P02461 1466 aaPredicted RBP14.71□□□□□ -0.05
LGR5-203ENST00000540815 KNDC1Q76NI1 1749 aa14.7□□□□□ -0.06
LGR5-203ENST00000540815 CCDC27Q2M243 656 aa14.7□□□□□ -0.06
LGR5-203ENST00000540815 HDGFL2Q7Z4V5 671 aaPredicted RBP14.7□□□□□ -0.06
LGR5-203ENST00000540815 ESF1Q9H501 851 aaKnown RBP14.7□□□□□ -0.06
LGR5-203ENST00000540815 METP08581 1390 aa14.7□□□□□ -0.06
LGR5-203ENST00000540815 FYB1O15117 783 aa14.7□□□□□ -0.06
LGR5-203ENST00000540815 WDR63Q8IWG1 891 aa14.7□□□□□ -0.06
LGR5-203ENST00000540815 RRP7AQ9Y3A4 280 aaKnown RBP14.7□□□□□ -0.06
LGR5-203ENST00000540815 ATP7BP35670 1465 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms