RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 RGS12O14924 1447 aa24.17■■□□□ 1.46
UBC-208ENST00000540700 RBM6P78332 1123 aaKnown RBP24.16■■□□□ 1.46
UBC-208ENST00000540700 DCAF11Q8TEB1 546 aa24.15■■□□□ 1.46
UBC-208ENST00000540700 ADAMTS2O95450 1211 aa24.14■■□□□ 1.45
UBC-208ENST00000540700 KDM2AQ9Y2K7 1162 aa24.14■■□□□ 1.45
UBC-208ENST00000540700 SETBP1Q9Y6X0 1596 aa24.14■■□□□ 1.45
UBC-208ENST00000540700 PIK3C2GO75747 1445 aa24.13■■□□□ 1.45
UBC-208ENST00000540700 METP08581 1390 aa24.13■■□□□ 1.45
UBC-208ENST00000540700 PNPLA6Q8IY17 1366 aa24.13■■□□□ 1.45
UBC-208ENST00000540700 VGFO15240 615 aaPredicted RBP24.12■■□□□ 1.45
UBC-208ENST00000540700 NGLY1Q96IV0 654 aa24.12■■□□□ 1.45
UBC-208ENST00000540700 TONSLQ96HA7 1378 aa24.11■■□□□ 1.45
UBC-208ENST00000540700 XRN1Q8IZH2 1706 aaKnown RBP24.09■■□□□ 1.45
UBC-208ENST00000540700 NHSL1Q5SYE7 1610 aa24.08■■□□□ 1.45
UBC-208ENST00000540700 PRAG1Q86YV5 1406 aa24.08■■□□□ 1.44
UBC-208ENST00000540700 ADGRL3Q9HAR2 1447 aa24.07■■□□□ 1.44
UBC-208ENST00000540700 NBPF8Q3BBV2 869 aa24.04■■□□□ 1.44
UBC-208ENST00000540700 CFAP70Q5T0N1 1121 aa24.03■■□□□ 1.44
UBC-208ENST00000540700 USP21Q9UK80 565 aa24.02■■□□□ 1.44
UBC-208ENST00000540700 ATAD2Q6PL18 1390 aa24.02■■□□□ 1.44
UBC-208ENST00000540700 STAC3Q96MF2 364 aa24.01■■□□□ 1.43
UBC-208ENST00000540700 C14orf93Q9H972 538 aaKnown RBP24.01■■□□□ 1.43
UBC-208ENST00000540700 C1orf167Q5SNV9 1468 aa24■■□□□ 1.43
UBC-208ENST00000540700 ORAI2Q96SN7 254 aa24■■□□□ 1.43
UBC-208ENST00000540700 TRPC5Q9UL62 973 aaPredicted RBP23.98■■□□□ 1.43
UBC-208ENST00000540700 ADGRB1O14514 1584 aa23.98■■□□□ 1.43
UBC-208ENST00000540700 TIMELESSQ9UNS1 1208 aa23.97■■□□□ 1.43
UBC-208ENST00000540700 NALCNQ8IZF0 1738 aa23.96■■□□□ 1.43
UBC-208ENST00000540700 TMEM132EQ6IEE7 984 aa23.96■■□□□ 1.43
UBC-208ENST00000540700 LAMC1P11047 1609 aa23.95■■□□□ 1.43
UBC-208ENST00000540700 TRPM1Q7Z4N2 1603 aa23.95■■□□□ 1.43
UBC-208ENST00000540700 SOS2Q07890 1332 aaPredicted RBP23.95■■□□□ 1.42
UBC-208ENST00000540700 NBPF1Q3BBV0 1214 aa23.95■■□□□ 1.42
UBC-208ENST00000540700 ZRANB1Q9UGI0 708 aa23.95■■□□□ 1.42
UBC-208ENST00000540700 KIAA1210Q9ULL0 1709 aa23.93■■□□□ 1.42
UBC-208ENST00000540700 FNBP4Q8N3X1 1017 aaPredicted RBP23.92■■□□□ 1.42
UBC-208ENST00000540700 ROBO2Q9HCK4 1378 aa23.91■■□□□ 1.42
UBC-208ENST00000540700 EP400Q96L91 3159 aa23.91■■□□□ 1.42
UBC-208ENST00000540700 PTCH1Q13635 1447 aa23.9■■□□□ 1.42
UBC-208ENST00000540700 ATRNO75882 1429 aa23.89■■□□□ 1.41
UBC-208ENST00000540700 RALGAPBQ86X10 1494 aa23.88■■□□□ 1.41
UBC-208ENST00000540700 YTHDC2Q9H6S0 1430 aaKnown RBP23.88■■□□□ 1.41
UBC-208ENST00000540700 LRPPRCP42704 1394 aaKnown RBP23.87■■□□□ 1.41
UBC-208ENST00000540700 XPCQ01831 940 aaPredicted RBP23.85■■□□□ 1.41
UBC-208ENST00000540700 ESCO1Q5FWF5 840 aa23.85■■□□□ 1.41
UBC-208ENST00000540700 STK26Q9P289 416 aa23.85■■□□□ 1.41
UBC-208ENST00000540700 TECPR2O15040 1411 aa23.84■■□□□ 1.41
UBC-208ENST00000540700 GPRASP1Q5JY77 1395 aa23.84■■□□□ 1.41
UBC-208ENST00000540700 KNDC1Q76NI1 1749 aa23.83■■□□□ 1.41
UBC-208ENST00000540700 ROCK2O75116 1388 aaKnown RBP23.82■■□□□ 1.4
UBC-208ENST00000540700 ABCC11Q96J66 1382 aa23.82■■□□□ 1.4
UBC-208ENST00000540700 NPHP3Q7Z494 1330 aa23.82■■□□□ 1.4
UBC-208ENST00000540700 BCL9LQ86UU0 1499 aa23.81■■□□□ 1.4
UBC-208ENST00000540700 PLEKHH1Q9ULM0 1364 aa23.8■■□□□ 1.4
UBC-208ENST00000540700 FOXO3O43524 673 aa23.8■■□□□ 1.4
UBC-208ENST00000540700 CCDC125Q86Z20 511 aa23.8■■□□□ 1.4
UBC-208ENST00000540700 GJD4Q96KN9 370 aaPredicted RBP23.8■■□□□ 1.4
UBC-208ENST00000540700 TRAK1Q9UPV9 953 aa23.79■■□□□ 1.4
UBC-208ENST00000540700 NUTM2FA1L443 756 aa23.78■■□□□ 1.4
UBC-208ENST00000540700 DLC1Q96QB1 1528 aa23.78■■□□□ 1.4
UBC-208ENST00000540700 COL22A1Q8NFW1 1626 aaPredicted RBP23.77■■□□□ 1.4
UBC-208ENST00000540700 ARHGEF28Q8N1W1 1705 aaKnown RBP23.76■■□□□ 1.39
UBC-208ENST00000540700 WAPLQ7Z5K2 1190 aa23.76■■□□□ 1.39
UBC-208ENST00000540700 PXDNQ92626 1479 aa23.75■■□□□ 1.39
UBC-208ENST00000540700 CARD11Q9BXL7 1154 aa23.74■■□□□ 1.39
UBC-208ENST00000540700 PRAM1Q96QH2 718 aa23.72■■□□□ 1.39
UBC-208ENST00000540700 DEFB132Q7Z7B7 95 aa23.71■■□□□ 1.39
UBC-208ENST00000540700 UNC5CLQ8IV45 518 aa23.71■■□□□ 1.39
UBC-208ENST00000540700 SIRT1Q96EB6 747 aa23.71■■□□□ 1.39
UBC-208ENST00000540700 PLEKHG5O94827 1062 aa23.68■■□□□ 1.38
UBC-208ENST00000540700 SAFB2Q14151 953 aaKnown RBP eCLIP23.68■■□□□ 1.38
UBC-208ENST00000540700 CDC42BPGQ6DT37 1551 aa23.68■■□□□ 1.38
UBC-208ENST00000540700 BLMP54132 1417 aaPredicted RBP23.67■■□□□ 1.38
UBC-208ENST00000540700 SF3B2Q13435 895 aaKnown RBP23.65■■□□□ 1.38
UBC-208ENST00000540700 USP47Q96K76 1375 aa23.65■■□□□ 1.38
UBC-208ENST00000540700 HAP1P54257 671 aaPredicted RBP23.64■■□□□ 1.37
UBC-208ENST00000540700 SEPT12Q8IYM1 358 aa23.64■■□□□ 1.37
UBC-208ENST00000540700 SPATA31A3Q5VYP0 1347 aa23.63■■□□□ 1.37
UBC-208ENST00000540700 GLI3P10071 1580 aa23.63■■□□□ 1.37
UBC-208ENST00000540700 POGKQ9P215 609 aa23.63■■□□□ 1.37
UBC-208ENST00000540700 MARF1Q9Y4F3 1742 aaKnown RBP23.63■■□□□ 1.37
UBC-208ENST00000540700 SLIT2O94813 1529 aa23.63■■□□□ 1.37
UBC-208ENST00000540700 CENPJQ9HC77 1338 aaPredicted RBP23.62■■□□□ 1.37
UBC-208ENST00000540700 KRT28Q7Z3Y7 464 aa23.62■■□□□ 1.37
UBC-208ENST00000540700 CCDC9Q9Y3X0 531 aaKnown RBP23.62■■□□□ 1.37
UBC-208ENST00000540700 QRICH2Q9H0J4 1663 aa23.61■■□□□ 1.37
UBC-208ENST00000540700 MINK1Q8N4C8 1332 aaPredicted RBP23.6■■□□□ 1.37
UBC-208ENST00000540700 CABLES1Q8TDN4 633 aa23.6■■□□□ 1.37
UBC-208ENST00000540700 HIRIP3Q9BW71 556 aaPredicted RBP23.6■■□□□ 1.37
UBC-208ENST00000540700 ADGRB2O60241 1585 aa23.6■■□□□ 1.37
UBC-208ENST00000540700 ST20-MTHFSA0A0A6YYL1 179 aa23.59■■□□□ 1.37
UBC-208ENST00000540700 EIF3AQ14152 1382 aaKnown RBP23.59■■□□□ 1.37
UBC-208ENST00000540700 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.57■■□□□ 1.36
UBC-208ENST00000540700 ZEB1P37275 1124 aaPredicted RBP23.57■■□□□ 1.36
UBC-208ENST00000540700 TESK2Q96S53 571 aa23.57■■□□□ 1.36
UBC-208ENST00000540700 TULP4Q9NRJ4 1543 aa23.57■■□□□ 1.36
UBC-208ENST00000540700 A0A0G2JS52 829 aa23.56■■□□□ 1.36
UBC-208ENST00000540700 MYT1Q01538 1121 aa23.56■■□□□ 1.36
UBC-208ENST00000540700 VPS72Q15906 364 aa23.56■■□□□ 1.36
UBC-208ENST00000540700 LMOD2Q6P5Q4 547 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms