RNA–Protein interactions for RNA: ENST00000540209.5

RAP1B-221, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAP1B, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-221ENST00000540209 LRP6O75581 1613 aa28.41■■■□□ 2.14
RAP1B-221ENST00000540209 WAPLQ7Z5K2 1190 aa28.41■■■□□ 2.14
RAP1B-221ENST00000540209 ADGRB1O14514 1584 aa28.4■■■□□ 2.14
RAP1B-221ENST00000540209 POTEAQ6S8J7 498 aa28.39■■■□□ 2.14
RAP1B-221ENST00000540209 DHX57Q6P158 1386 aaKnown RBP28.38■■■□□ 2.13
RAP1B-221ENST00000540209 FMN2Q9NZ56 1722 aa28.38■■■□□ 2.13
RAP1B-221ENST00000540209 DDX17Q92841 729 aaKnown RBP28.37■■■□□ 2.13
RAP1B-221ENST00000540209 SIRT1Q96EB6 747 aa28.37■■■□□ 2.13
RAP1B-221ENST00000540209 DCAF11Q8TEB1 546 aa28.36■■■□□ 2.13
RAP1B-221ENST00000540209 ORAI2Q96SN7 254 aa28.36■■■□□ 2.13
RAP1B-221ENST00000540209 DLC1Q96QB1 1528 aa28.35■■■□□ 2.13
RAP1B-221ENST00000540209 STAC3Q96MF2 364 aa28.35■■■□□ 2.13
RAP1B-221ENST00000540209 LRRC59Q96AG4 307 aaKnown RBP28.33■■■□□ 2.13
RAP1B-221ENST00000540209 KDM2AQ9Y2K7 1162 aa28.32■■■□□ 2.12
RAP1B-221ENST00000540209 SOS2Q07890 1332 aaPredicted RBP28.3■■■□□ 2.12
RAP1B-221ENST00000540209 PNPLA6Q8IY17 1366 aa28.29■■■□□ 2.12
RAP1B-221ENST00000540209 RGPD8O14715 1765 aaPredicted RBP28.27■■■□□ 2.12
RAP1B-221ENST00000540209 ADGRB2O60241 1585 aa28.26■■■□□ 2.11
RAP1B-221ENST00000540209 ESCO1Q5FWF5 840 aa28.26■■■□□ 2.11
RAP1B-221ENST00000540209 PRAM1Q96QH2 718 aa28.26■■■□□ 2.11
RAP1B-221ENST00000540209 KIF1AQ12756 1690 aa28.26■■■□□ 2.11
RAP1B-221ENST00000540209 PXDNQ92626 1479 aa28.25■■■□□ 2.11
RAP1B-221ENST00000540209 KIAA1210Q9ULL0 1709 aa28.24■■■□□ 2.11
RAP1B-221ENST00000540209 COL22A1Q8NFW1 1626 aaPredicted RBP28.23■■■□□ 2.11
RAP1B-221ENST00000540209 MEX3CQ5U5Q3 659 aaKnown RBP28.23■■■□□ 2.11
RAP1B-221ENST00000540209 NPHP3Q7Z494 1330 aa28.22■■■□□ 2.11
RAP1B-221ENST00000540209 NUTM2FA1L443 756 aa28.22■■■□□ 2.11
RAP1B-221ENST00000540209 ARHGEF28Q8N1W1 1705 aaKnown RBP28.22■■■□□ 2.11
RAP1B-221ENST00000540209 NUTM2BA6NNL0 878 aaPredicted RBP28.21■■■□□ 2.11
RAP1B-221ENST00000540209 NUTM2EB1AL46 878 aaPredicted RBP28.21■■■□□ 2.11
RAP1B-221ENST00000540209 NUTM2AQ8IVF1 878 aaPredicted RBP28.21■■■□□ 2.11
RAP1B-221ENST00000540209 USP32Q8NFA0 1604 aa28.19■■■□□ 2.1
RAP1B-221ENST00000540209 SAFB2Q14151 953 aaKnown RBP eCLIP28.19■■■□□ 2.1
RAP1B-221ENST00000540209 TRAK1Q9UPV9 953 aa28.19■■■□□ 2.1
RAP1B-221ENST00000540209 POGKQ9P215 609 aa28.18■■■□□ 2.1
RAP1B-221ENST00000540209 FOXO3O43524 673 aa28.17■■■□□ 2.1
RAP1B-221ENST00000540209 ZNF772Q68DY9 489 aaPredicted RBP28.14■■■□□ 2.1
RAP1B-221ENST00000540209 ANKARQ7Z5J8 1434 aa28.13■■■□□ 2.09
RAP1B-221ENST00000540209 XPCQ01831 940 aaPredicted RBP28.11■■■□□ 2.09
RAP1B-221ENST00000540209 AFF2P51816 1311 aa28.09■■■□□ 2.09
RAP1B-221ENST00000540209 MARF1Q9Y4F3 1742 aaKnown RBP28.09■■■□□ 2.09
RAP1B-221ENST00000540209 TULP4Q9NRJ4 1543 aa28.08■■■□□ 2.09
RAP1B-221ENST00000540209 HIRIP3Q9BW71 556 aaPredicted RBP28.08■■■□□ 2.09
RAP1B-221ENST00000540209 PHF8Q9UPP1 1060 aa28.08■■■□□ 2.09
RAP1B-221ENST00000540209 MINK1Q8N4C8 1332 aaPredicted RBP28.08■■■□□ 2.09
RAP1B-221ENST00000540209 C8orf37Q96NL8 207 aa28.06■■■□□ 2.08
RAP1B-221ENST00000540209 EIF3AQ14152 1382 aaKnown RBP28.05■■■□□ 2.08
RAP1B-221ENST00000540209 SIN3AQ96ST3 1273 aa28.05■■■□□ 2.08
RAP1B-221ENST00000540209 SPATA31A3Q5VYP0 1347 aa28.04■■■□□ 2.08
RAP1B-221ENST00000540209 ADAMTS2O95450 1211 aa28.04■■■□□ 2.08
RAP1B-221ENST00000540209 WASLO00401 505 aaPredicted RBP28.03■■■□□ 2.08
RAP1B-221ENST00000540209 KRT28Q7Z3Y7 464 aa28.03■■■□□ 2.08
RAP1B-221ENST00000540209 L3MBTL2Q969R5 705 aa28.03■■■□□ 2.08
RAP1B-221ENST00000540209 PRR36Q9H6K5 1346 aa28.02■■■□□ 2.08
RAP1B-221ENST00000540209 ITSN1Q15811 1721 aa28.02■■■□□ 2.08
RAP1B-221ENST00000540209 NBPF1Q3BBV0 1214 aa28.02■■■□□ 2.08
RAP1B-221ENST00000540209 TNS3Q68CZ2 1445 aa28.01■■■□□ 2.07
RAP1B-221ENST00000540209 TRPM1Q7Z4N2 1603 aa28■■■□□ 2.07
RAP1B-221ENST00000540209 TRPM3Q9HCF6 1732 aaPredicted RBP28■■■□□ 2.07
RAP1B-221ENST00000540209 ATP7BP35670 1465 aa27.98■■■□□ 2.07
RAP1B-221ENST00000540209 TRIM26Q12899 539 aaPredicted RBP27.98■■■□□ 2.07
RAP1B-221ENST00000540209 NGLY1Q96IV0 654 aa27.98■■■□□ 2.07
RAP1B-221ENST00000540209 SBNO1A3KN83 1393 aa27.98■■■□□ 2.07
RAP1B-221ENST00000540209 CDK12Q9NYV4 1490 aaPredicted RBP27.97■■■□□ 2.07
RAP1B-221ENST00000540209 PSME1Q06323 249 aa27.97■■■□□ 2.07
RAP1B-221ENST00000540209 PMFBP1Q8TBY8 1022 aa27.97■■■□□ 2.07
RAP1B-221ENST00000540209 ABCA3Q99758 1704 aa27.97■■■□□ 2.07
RAP1B-221ENST00000540209 TOPAZ1Q8N9V7 1692 aa27.96■■■□□ 2.07
RAP1B-221ENST00000540209 RXRBP28702 533 aa27.95■■■□□ 2.06
RAP1B-221ENST00000540209 NEUROD1Q13562 356 aa27.95■■■□□ 2.06
RAP1B-221ENST00000540209 UPF1Q92900 1129 aaKnown RBP eCLIP27.95■■■□□ 2.06
RAP1B-221ENST00000540209 ALS2Q96Q42 1657 aa27.94■■■□□ 2.06
RAP1B-221ENST00000540209 FNBP4Q8N3X1 1017 aaPredicted RBP27.94■■■□□ 2.06
RAP1B-221ENST00000540209 QRICH2Q9H0J4 1663 aa27.94■■■□□ 2.06
RAP1B-221ENST00000540209 QTRT2Q9H974 415 aaKnown RBP27.92■■■□□ 2.06
RAP1B-221ENST00000540209 ARHGEF10O15013 1369 aa27.91■■■□□ 2.06
RAP1B-221ENST00000540209 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.9■■■□□ 2.06
RAP1B-221ENST00000540209 USP21Q9UK80 565 aa27.9■■■□□ 2.06
RAP1B-221ENST00000540209 BCL9LQ86UU0 1499 aa27.89■■■□□ 2.05
RAP1B-221ENST00000540209 RBM6P78332 1123 aaKnown RBP27.88■■■□□ 2.05
RAP1B-221ENST00000540209 NUDT16Q96DE0 195 aaKnown RBP27.88■■■□□ 2.05
RAP1B-221ENST00000540209 CDK19Q9BWU1 502 aa27.88■■■□□ 2.05
RAP1B-221ENST00000540209 CENPJQ9HC77 1338 aaPredicted RBP27.88■■■□□ 2.05
RAP1B-221ENST00000540209 GPRASP1Q5JY77 1395 aa27.87■■■□□ 2.05
RAP1B-221ENST00000540209 RGS12O14924 1447 aa27.86■■■□□ 2.05
RAP1B-221ENST00000540209 ATRNO75882 1429 aa27.86■■■□□ 2.05
RAP1B-221ENST00000540209 CRYBG1Q9Y4K1 1723 aa27.85■■■□□ 2.05
RAP1B-221ENST00000540209 SLIT2O94813 1529 aa27.84■■■□□ 2.05
RAP1B-221ENST00000540209 TRPC5Q9UL62 973 aaPredicted RBP27.84■■■□□ 2.05
RAP1B-221ENST00000540209 LMOD2Q6P5Q4 547 aa27.83■■■□□ 2.05
RAP1B-221ENST00000540209 NGDNQ8NEJ9 315 aaKnown RBP27.83■■■□□ 2.05
RAP1B-221ENST00000540209 CABLES1Q8TDN4 633 aa27.83■■■□□ 2.05
RAP1B-221ENST00000540209 PLCH1Q4KWH8 1693 aa27.83■■■□□ 2.05
RAP1B-221ENST00000540209 ROCK2O75116 1388 aaKnown RBP27.82■■■□□ 2.04
RAP1B-221ENST00000540209 POLR3AO14802 1390 aaPredicted RBP27.81■■■□□ 2.04
RAP1B-221ENST00000540209 NWD2Q9ULI1 1742 aa27.81■■■□□ 2.04
RAP1B-221ENST00000540209 CCDC61Q9Y6R9 512 aa27.8■■■□□ 2.04
RAP1B-221ENST00000540209 NBPF8Q3BBV2 869 aa27.79■■■□□ 2.04
RAP1B-221ENST00000540209 HAP1P54257 671 aaPredicted RBP27.78■■■□□ 2.04
RAP1B-221ENST00000540209 TONSLQ96HA7 1378 aa27.76■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms