RNA–Protein interactions for RNA: ENST00000539782.1

LDHB-208, Transcript of lactate dehydrogenase B, humanhuman

TSL 3

Gene LDHB, Length 487 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-208ENST00000539782 NPHP3Q7Z494 1330 aa10.8□□□□□ -0.68
LDHB-208ENST00000539782 CDC42BPGQ6DT37 1551 aa10.79□□□□□ -0.68
LDHB-208ENST00000539782 PRAG1Q86YV5 1406 aa10.79□□□□□ -0.68
LDHB-208ENST00000539782 PPLO60437 1756 aa10.78□□□□□ -0.68
LDHB-208ENST00000539782 LRPPRCP42704 1394 aaKnown RBP10.77□□□□□ -0.68
LDHB-208ENST00000539782 COL22A1Q8NFW1 1626 aaPredicted RBP10.77□□□□□ -0.68
LDHB-208ENST00000539782 CCDC144AA2RUR9 1427 aa10.76□□□□□ -0.69
LDHB-208ENST00000539782 ATRNO75882 1429 aa10.76□□□□□ -0.69
LDHB-208ENST00000539782 NUTM2FA1L443 756 aa10.76□□□□□ -0.69
LDHB-208ENST00000539782 XPCQ01831 940 aaPredicted RBP10.76□□□□□ -0.69
LDHB-208ENST00000539782 FNBP4Q8N3X1 1017 aaPredicted RBP10.76□□□□□ -0.69
LDHB-208ENST00000539782 STK26Q9P289 416 aa10.76□□□□□ -0.69
LDHB-208ENST00000539782 MYOM2P54296 1465 aa10.75□□□□□ -0.69
LDHB-208ENST00000539782 FOXO3O43524 673 aa10.75□□□□□ -0.69
LDHB-208ENST00000539782 RGL3Q3MIN7 710 aa10.75□□□□□ -0.69
LDHB-208ENST00000539782 ZRANB1Q9UGI0 708 aa10.75□□□□□ -0.69
LDHB-208ENST00000539782 PXDNQ92626 1479 aa10.74□□□□□ -0.69
LDHB-208ENST00000539782 HAP1P54257 671 aaPredicted RBP10.74□□□□□ -0.69
LDHB-208ENST00000539782 ANKRD30BQ9BXX2 1392 aa10.74□□□□□ -0.69
LDHB-208ENST00000539782 ADGRF5Q8IZF2 1346 aa10.73□□□□□ -0.69
LDHB-208ENST00000539782 WAPLQ7Z5K2 1190 aa10.72□□□□□ -0.69
LDHB-208ENST00000539782 CCDC125Q86Z20 511 aa10.72□□□□□ -0.69
LDHB-208ENST00000539782 TECPR2O15040 1411 aa10.72□□□□□ -0.69
LDHB-208ENST00000539782 KIF1AQ12756 1690 aa10.72□□□□□ -0.69
LDHB-208ENST00000539782 MARF1Q9Y4F3 1742 aaKnown RBP10.72□□□□□ -0.69
LDHB-208ENST00000539782 TMEM132EQ6IEE7 984 aa10.71□□□□□ -0.69
LDHB-208ENST00000539782 BCL9LQ86UU0 1499 aa10.71□□□□□ -0.69
LDHB-208ENST00000539782 GJD4Q96KN9 370 aaPredicted RBP10.71□□□□□ -0.69
LDHB-208ENST00000539782 KNDC1Q76NI1 1749 aa10.7□□□□□ -0.7
LDHB-208ENST00000539782 ABCC11Q96J66 1382 aa10.7□□□□□ -0.7
LDHB-208ENST00000539782 UNC5CLQ8IV45 518 aa10.7□□□□□ -0.7
LDHB-208ENST00000539782 FMN2Q9NZ56 1722 aa10.7□□□□□ -0.7
LDHB-208ENST00000539782 SPATA31E1Q6ZUB1 1445 aa10.69□□□□□ -0.7
LDHB-208ENST00000539782 YTHDC2Q9H6S0 1430 aaKnown RBP10.69□□□□□ -0.7
LDHB-208ENST00000539782 PLEKHH1Q9ULM0 1364 aa10.69□□□□□ -0.7
LDHB-208ENST00000539782 SPATA31A3Q5VYP0 1347 aa10.69□□□□□ -0.7
LDHB-208ENST00000539782 PLEKHG5O94827 1062 aa10.69□□□□□ -0.7
LDHB-208ENST00000539782 PSME1Q06323 249 aa10.69□□□□□ -0.7
LDHB-208ENST00000539782 SF3B2Q13435 895 aaKnown RBP10.69□□□□□ -0.7
LDHB-208ENST00000539782 LMOD2Q6P5Q4 547 aa10.69□□□□□ -0.7
LDHB-208ENST00000539782 KRT28Q7Z3Y7 464 aa10.69□□□□□ -0.7
LDHB-208ENST00000539782 CCDC9Q9Y3X0 531 aaKnown RBP10.69□□□□□ -0.7
LDHB-208ENST00000539782 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.69□□□□□ -0.7
LDHB-208ENST00000539782 RALGAPBQ86X10 1494 aa10.68□□□□□ -0.7
LDHB-208ENST00000539782 PIK3C2GO75747 1445 aa10.68□□□□□ -0.7
LDHB-208ENST00000539782 IFT172Q9UG01 1749 aa10.68□□□□□ -0.7
LDHB-208ENST00000539782 MPHOSPH9Q99550 1183 aa10.68□□□□□ -0.7
LDHB-208ENST00000539782 PHF8Q9UPP1 1060 aa10.68□□□□□ -0.7
LDHB-208ENST00000539782 USP32Q8NFA0 1604 aa10.68□□□□□ -0.7
LDHB-208ENST00000539782 TNS3Q68CZ2 1445 aa10.67□□□□□ -0.7
LDHB-208ENST00000539782 SLIT2O94813 1529 aa10.67□□□□□ -0.7
LDHB-208ENST00000539782 BLMP54132 1417 aaPredicted RBP10.67□□□□□ -0.7
LDHB-208ENST00000539782 DHX57Q6P158 1386 aaKnown RBP10.66□□□□□ -0.7
LDHB-208ENST00000539782 GLI3P10071 1580 aa10.66□□□□□ -0.7
LDHB-208ENST00000539782 A0A0G2JS52 829 aa10.66□□□□□ -0.7
LDHB-208ENST00000539782 MYT1Q01538 1121 aa10.66□□□□□ -0.7
LDHB-208ENST00000539782 ARHGEF10O15013 1369 aa10.65□□□□□ -0.7
LDHB-208ENST00000539782 ACIN1Q9UKV3 1341 aaKnown RBP10.65□□□□□ -0.7
LDHB-208ENST00000539782 SAFB2Q14151 953 aaKnown RBP eCLIP10.65□□□□□ -0.7
LDHB-208ENST00000539782 SIRT1Q96EB6 747 aa10.65□□□□□ -0.7
LDHB-208ENST00000539782 POGKQ9P215 609 aa10.65□□□□□ -0.7
LDHB-208ENST00000539782 VPS72Q15906 364 aa10.64□□□□□ -0.71
LDHB-208ENST00000539782 SEPT12Q8IYM1 358 aa10.64□□□□□ -0.71
LDHB-208ENST00000539782 CABLES1Q8TDN4 633 aa10.64□□□□□ -0.71
LDHB-208ENST00000539782 PRAM1Q96QH2 718 aa10.64□□□□□ -0.71
LDHB-208ENST00000539782 SBNO1A3KN83 1393 aa10.64□□□□□ -0.71
LDHB-208ENST00000539782 CFAP70Q5T0N1 1121 aa10.63□□□□□ -0.71
LDHB-208ENST00000539782 C14orf93Q9H972 538 aaKnown RBP10.63□□□□□ -0.71
LDHB-208ENST00000539782 PLCH1Q4KWH8 1693 aa10.63□□□□□ -0.71
LDHB-208ENST00000539782 NRXN1Q9ULB1 1477 aa10.62□□□□□ -0.71
LDHB-208ENST00000539782 KRT27Q7Z3Y8 459 aa10.62□□□□□ -0.71
LDHB-208ENST00000539782 EIF3AQ14152 1382 aaKnown RBP10.62□□□□□ -0.71
LDHB-208ENST00000539782 NWD2Q9ULI1 1742 aa10.61□□□□□ -0.71
LDHB-208ENST00000539782 ANKARQ7Z5J8 1434 aa10.61□□□□□ -0.71
LDHB-208ENST00000539782 DEFB132Q7Z7B7 95 aa10.61□□□□□ -0.71
LDHB-208ENST00000539782 PMFBP1Q8TBY8 1022 aa10.61□□□□□ -0.71
LDHB-208ENST00000539782 EP400Q96L91 3159 aa10.61□□□□□ -0.71
LDHB-208ENST00000539782 GPRASP1Q5JY77 1395 aa10.61□□□□□ -0.71
LDHB-208ENST00000539782 DLC1Q96QB1 1528 aa10.6□□□□□ -0.71
LDHB-208ENST00000539782 BAG6P46379 1132 aa10.6□□□□□ -0.71
LDHB-208ENST00000539782 ABCA3Q99758 1704 aa10.6□□□□□ -0.71
LDHB-208ENST00000539782 RGPD8O14715 1765 aaPredicted RBP10.6□□□□□ -0.71
LDHB-208ENST00000539782 BRWD3Q6RI45 1802 aa10.59□□□□□ -0.71
LDHB-208ENST00000539782 ADGRB2O60241 1585 aa10.58□□□□□ -0.72
LDHB-208ENST00000539782 FAM98CQ17RN3 349 aaKnown RBP10.58□□□□□ -0.72
LDHB-208ENST00000539782 HIRIP3Q9BW71 556 aaPredicted RBP10.58□□□□□ -0.72
LDHB-208ENST00000539782 BTG4Q9NY30 223 aa10.58□□□□□ -0.72
LDHB-208ENST00000539782 TRAK1Q9UPV9 953 aa10.58□□□□□ -0.72
LDHB-208ENST00000539782 MINK1Q8N4C8 1332 aaPredicted RBP10.58□□□□□ -0.72
LDHB-208ENST00000539782 FAM83GA6ND36 823 aa10.57□□□□□ -0.72
LDHB-208ENST00000539782 PAK3O75914 559 aaPredicted RBP10.57□□□□□ -0.72
LDHB-208ENST00000539782 NGDNQ8NEJ9 315 aaKnown RBP10.57□□□□□ -0.72
LDHB-208ENST00000539782 SRCAPQ6ZRS2 3230 aa10.57□□□□□ -0.72
LDHB-208ENST00000539782 COL14A1Q05707 1796 aaKnown RBP10.57□□□□□ -0.72
LDHB-208ENST00000539782 ONECUT3O60422 494 aaPredicted RBP10.56□□□□□ -0.72
LDHB-208ENST00000539782 TULP4Q9NRJ4 1543 aa10.56□□□□□ -0.72
LDHB-208ENST00000539782 PSDA5PKW4 1024 aaPredicted RBP10.55□□□□□ -0.72
LDHB-208ENST00000539782 PRDM11Q9NQV5 511 aa10.55□□□□□ -0.72
LDHB-208ENST00000539782 KDM2AQ9Y2K7 1162 aa10.55□□□□□ -0.72
LDHB-208ENST00000539782 ADGRB1O14514 1584 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms