RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 NCBP3Q53F19 620 aaKnown RBP22.35■■□□□ 1.17
RAB40C-205ENST00000539661 RUNDC1Q96C34 613 aa22.35■■□□□ 1.17
RAB40C-205ENST00000539661 CARD14Q9BXL6 1004 aa22.35■■□□□ 1.17
RAB40C-205ENST00000539661 ISY1Q9ULR0 285 aaKnown RBP22.34■■□□□ 1.17
RAB40C-205ENST00000539661 PLCH2O75038 1416 aa22.34■■□□□ 1.17
RAB40C-205ENST00000539661 MYO3AQ8NEV4 1616 aa22.33■■□□□ 1.17
RAB40C-205ENST00000539661 TET3O43151 1660 aa22.33■■□□□ 1.17
RAB40C-205ENST00000539661 MYOM2P54296 1465 aa22.33■■□□□ 1.16
RAB40C-205ENST00000539661 SBNO2Q9Y2G9 1366 aa22.33■■□□□ 1.16
RAB40C-205ENST00000539661 DEPDC5O75140 1603 aa22.32■■□□□ 1.16
RAB40C-205ENST00000539661 CCDC27Q2M243 656 aa22.32■■□□□ 1.16
RAB40C-205ENST00000539661 ABCC1P33527 1531 aa22.31■■□□□ 1.16
RAB40C-205ENST00000539661 MRE11P49959 708 aa22.31■■□□□ 1.16
RAB40C-205ENST00000539661 MAP3K4Q9Y6R4 1608 aa22.31■■□□□ 1.16
RAB40C-205ENST00000539661 RLBP1P12271 317 aa22.31■■□□□ 1.16
RAB40C-205ENST00000539661 PNNQ9H307 717 aaKnown RBP22.31■■□□□ 1.16
RAB40C-205ENST00000539661 RTEL1-TNFRSF6BF6WH68 1400 aa22.31■■□□□ 1.16
RAB40C-205ENST00000539661 GLIPR1L2Q4G1C9 344 aa22.29■■□□□ 1.16
RAB40C-205ENST00000539661 TRAK2O60296 914 aa22.28■■□□□ 1.16
RAB40C-205ENST00000539661 C22orf23Q9BZE7 217 aa22.28■■□□□ 1.16
RAB40C-205ENST00000539661 ABCA6Q8N139 1617 aa22.28■■□□□ 1.16
RAB40C-205ENST00000539661 SPAG9O60271 1321 aaKnown RBP22.28■■□□□ 1.16
RAB40C-205ENST00000539661 DDX11L8A8MPP1 907 aa22.27■■□□□ 1.16
RAB40C-205ENST00000539661 MVPQ14764 893 aaKnown RBP22.27■■□□□ 1.16
RAB40C-205ENST00000539661 TCP11L2Q8N4U5 519 aa22.27■■□□□ 1.15
RAB40C-205ENST00000539661 MYH16Q9H6N6 1097 aa22.26■■□□□ 1.15
RAB40C-205ENST00000539661 USP32Q8NFA0 1604 aa22.25■■□□□ 1.15
RAB40C-205ENST00000539661 CT47B1P0C2W7 299 aaPredicted RBP22.25■■□□□ 1.15
RAB40C-205ENST00000539661 VWDEQ8N2E2 1590 aa22.24■■□□□ 1.15
RAB40C-205ENST00000539661 PANK2Q9BZ23 570 aa22.24■■□□□ 1.15
RAB40C-205ENST00000539661 NCOA3Q9Y6Q9 1424 aa22.23■■□□□ 1.15
RAB40C-205ENST00000539661 MORC1Q86VD1 984 aa22.23■■□□□ 1.15
RAB40C-205ENST00000539661 NAP1L5Q96NT1 182 aaPredicted RBP22.23■■□□□ 1.15
RAB40C-205ENST00000539661 TNNQ9UQP3 1299 aa22.23■■□□□ 1.15
RAB40C-205ENST00000539661 IFT172Q9UG01 1749 aa22.22■■□□□ 1.15
RAB40C-205ENST00000539661 ZKSCAN2Q63HK3 967 aa22.22■■□□□ 1.15
RAB40C-205ENST00000539661 OSCARQ8IYS5 282 aa22.22■■□□□ 1.15
RAB40C-205ENST00000539661 ADGRL1O94910 1474 aa22.22■■□□□ 1.15
RAB40C-205ENST00000539661 KIF3BO15066 747 aa22.22■■□□□ 1.15
RAB40C-205ENST00000539661 HDAC1Q13547 482 aaPredicted RBP22.22■■□□□ 1.15
RAB40C-205ENST00000539661 HSCBQ8IWL3 235 aa22.22■■□□□ 1.15
RAB40C-205ENST00000539661 GZF1Q9H116 711 aaPredicted RBP22.22■■□□□ 1.15
RAB40C-205ENST00000539661 SENP3Q9H4L4 574 aaPredicted RBP22.22■■□□□ 1.15
RAB40C-205ENST00000539661 NSD3Q9BZ95 1437 aa22.21■■□□□ 1.15
RAB40C-205ENST00000539661 ZNF518AQ6AHZ1 1483 aa22.21■■□□□ 1.15
RAB40C-205ENST00000539661 ZFYVE16Q7Z3T8 1539 aa22.21■■□□□ 1.15
RAB40C-205ENST00000539661 NEUROD2Q15784 382 aa22.21■■□□□ 1.15
RAB40C-205ENST00000539661 CFAP70Q5T0N1 1121 aa22.21■■□□□ 1.15
RAB40C-205ENST00000539661 GRPEL1Q9HAV7 217 aa22.2■■□□□ 1.14
RAB40C-205ENST00000539661 RRP7AQ9Y3A4 280 aaKnown RBP22.2■■□□□ 1.14
RAB40C-205ENST00000539661 DZIP1LQ8IYY4 767 aaKnown RBP22.2■■□□□ 1.14
RAB40C-205ENST00000539661 ZNF692Q9BU19 519 aaPredicted RBP22.2■■□□□ 1.14
RAB40C-205ENST00000539661 ASXL2Q76L83 1435 aa22.19■■□□□ 1.14
RAB40C-205ENST00000539661 NRXN1Q9ULB1 1477 aa22.19■■□□□ 1.14
RAB40C-205ENST00000539661 RRP9O43818 475 aaKnown RBP22.19■■□□□ 1.14
RAB40C-205ENST00000539661 SPRYD3Q8NCJ5 442 aa22.19■■□□□ 1.14
RAB40C-205ENST00000539661 SETBP1Q9Y6X0 1596 aa22.19■■□□□ 1.14
RAB40C-205ENST00000539661 KIF1BO60333 1816 aa22.19■■□□□ 1.14
RAB40C-205ENST00000539661 DDIT3P35638 169 aa22.18■■□□□ 1.14
RAB40C-205ENST00000539661 MFAP1P55081 439 aaKnown RBP22.18■■□□□ 1.14
RAB40C-205ENST00000539661 CFAP53Q96M91 514 aa22.18■■□□□ 1.14
RAB40C-205ENST00000539661 FANCAO15360 1455 aa22.18■■□□□ 1.14
RAB40C-205ENST00000539661 HSP90AA1P07900 732 aaKnown RBP22.18■■□□□ 1.14
RAB40C-205ENST00000539661 FTSJ3Q8IY81 847 aaKnown RBP22.18■■□□□ 1.14
RAB40C-205ENST00000539661 ARXQ96QS3 562 aa22.18■■□□□ 1.14
RAB40C-205ENST00000539661 BCL2L13Q9BXK5 485 aa22.18■■□□□ 1.14
RAB40C-205ENST00000539661 ADGRB2O60241 1585 aa22.18■■□□□ 1.14
RAB40C-205ENST00000539661 PTMSP20962 102 aa22.17■■□□□ 1.14
RAB40C-205ENST00000539661 SNX21Q969T3 373 aa22.17■■□□□ 1.14
RAB40C-205ENST00000539661 CIZ1Q9ULV3 898 aaPredicted RBP22.17■■□□□ 1.14
RAB40C-205ENST00000539661 ARAP3Q8WWN8 1544 aa22.16■■□□□ 1.14
RAB40C-205ENST00000539661 ZC3H13Q5T200 1668 aaKnown RBP22.16■■□□□ 1.14
RAB40C-205ENST00000539661 RBM25P49756 843 aaKnown RBP22.15■■□□□ 1.14
RAB40C-205ENST00000539661 DDX19BQ9UMR2 479 aa22.15■■□□□ 1.14
RAB40C-205ENST00000539661 ESPNB1AK53 854 aa22.14■■□□□ 1.14
RAB40C-205ENST00000539661 ADGRF5Q8IZF2 1346 aa22.14■■□□□ 1.13
RAB40C-205ENST00000539661 SMC5Q8IY18 1101 aa22.14■■□□□ 1.13
RAB40C-205ENST00000539661 HSP90AA2PQ14568 343 aaPredicted RBP22.13■■□□□ 1.13
RAB40C-205ENST00000539661 SKOR2Q2VWA4 1001 aaPredicted RBP22.13■■□□□ 1.13
RAB40C-205ENST00000539661 INO80Q9ULG1 1556 aaPredicted RBP22.11■■□□□ 1.13
RAB40C-205ENST00000539661 GBP4Q96PP9 640 aa22.11■■□□□ 1.13
RAB40C-205ENST00000539661 NSD2O96028 1365 aa22.11■■□□□ 1.13
RAB40C-205ENST00000539661 MTHFSP49914 203 aa22.1■■□□□ 1.13
RAB40C-205ENST00000539661 QRICH2Q9H0J4 1663 aa22.09■■□□□ 1.13
RAB40C-205ENST00000539661 RAPGEF3O95398 923 aa22.09■■□□□ 1.13
RAB40C-205ENST00000539661 NPM1P06748 294 aaKnown RBP eCLIP22.08■■□□□ 1.12
RAB40C-205ENST00000539661 TRIM44Q96DX7 344 aaPredicted RBP22.08■■□□□ 1.12
RAB40C-205ENST00000539661 UGGT1Q9NYU2 1555 aa22.07■■□□□ 1.12
RAB40C-205ENST00000539661 TRIM27P14373 513 aa22.07■■□□□ 1.12
RAB40C-205ENST00000539661 SMC4Q9NTJ3 1288 aa22.07■■□□□ 1.12
RAB40C-205ENST00000539661 MROH2AA6NES4 1674 aa22.07■■□□□ 1.12
RAB40C-205ENST00000539661 ATP7AQ04656 1500 aa22.07■■□□□ 1.12
RAB40C-205ENST00000539661 TNNT2P45379 298 aaPredicted RBP22.07■■□□□ 1.12
RAB40C-205ENST00000539661 TNPO1Q92973 898 aaKnown RBP22.07■■□□□ 1.12
RAB40C-205ENST00000539661 PUS7Q96PZ0 661 aaKnown RBP22.07■■□□□ 1.12
RAB40C-205ENST00000539661 RAB3GAP1Q15042 981 aa22.06■■□□□ 1.12
RAB40C-205ENST00000539661 CYB5RLQ6IPT4 315 aa22.06■■□□□ 1.12
RAB40C-205ENST00000539661 GGT6Q6P531 493 aa22.06■■□□□ 1.12
RAB40C-205ENST00000539661 ATF7IPQ6VMQ6 1270 aa22.06■■□□□ 1.12
RAB40C-205ENST00000539661 CFAP65Q6ZU64 1925 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms