RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 HAP1P54257 671 aaPredicted RBP7.35□□□□□ -1.23
RAB3GAP1-207ENST00000539493 C14orf37Q86TY3 774 aa7.35□□□□□ -1.23
RAB3GAP1-207ENST00000539493 POLR3GLQ9BT43 218 aa7.35□□□□□ -1.23
RAB3GAP1-207ENST00000539493 CLTCL1P53675 1640 aa7.35□□□□□ -1.23
RAB3GAP1-207ENST00000539493 ZNF622Q969S3 477 aaKnown RBP eCLIP7.35□□□□□ -1.237e-7■■□□□ 12.3
RAB3GAP1-207ENST00000539493 MLH3Q9UHC1 1453 aa7.35□□□□□ -1.23
RAB3GAP1-207ENST00000539493 CDK11BP21127 795 aaKnown RBP7.34□□□□□ -1.23
RAB3GAP1-207ENST00000539493 CCDC94Q9BW85 323 aaPredicted RBP7.34□□□□□ -1.23
RAB3GAP1-207ENST00000539493 KCNG1Q9UIX4 513 aa7.34□□□□□ -1.23
RAB3GAP1-207ENST00000539493 CEP152O94986 1710 aa7.34□□□□□ -1.23
RAB3GAP1-207ENST00000539493 ERBB4Q15303 1308 aa7.34□□□□□ -1.23
RAB3GAP1-207ENST00000539493 KIAA1211Q6ZU35 1233 aa7.34□□□□□ -1.23
RAB3GAP1-207ENST00000539493 FRMPD1Q5SYB0 1578 aa7.34□□□□□ -1.23
RAB3GAP1-207ENST00000539493 HECW2Q9P2P5 1572 aa7.34□□□□□ -1.23
RAB3GAP1-207ENST00000539493 EFCAB6Q5THR3 1501 aa7.34□□□□□ -1.24
RAB3GAP1-207ENST00000539493 RNF17Q9BXT8 1623 aaKnown RBP7.34□□□□□ -1.24
RAB3GAP1-207ENST00000539493 NEO1Q92859 1461 aa7.33□□□□□ -1.24
RAB3GAP1-207ENST00000539493 AMER1Q5JTC6 1135 aaPredicted RBP7.33□□□□□ -1.24
RAB3GAP1-207ENST00000539493 MADDQ8WXG6 1647 aa7.33□□□□□ -1.24
RAB3GAP1-207ENST00000539493 LMTK2Q8IWU2 1503 aa7.33□□□□□ -1.24
RAB3GAP1-207ENST00000539493 MRE11P49959 708 aa7.33□□□□□ -1.24
RAB3GAP1-207ENST00000539493 POGKQ9P215 609 aa7.33□□□□□ -1.24
RAB3GAP1-207ENST00000539493 DYNC1I1O14576 645 aa7.32□□□□□ -1.24
RAB3GAP1-207ENST00000539493 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.32□□□□□ -1.24
RAB3GAP1-207ENST00000539493 PLCD3Q8N3E9 789 aa7.32□□□□□ -1.24
RAB3GAP1-207ENST00000539493 MRS2Q9HD23 443 aa7.32□□□□□ -1.24
RAB3GAP1-207ENST00000539493 PPRC1Q5VV67 1664 aaKnown RBP7.32□□□□□ -1.24
RAB3GAP1-207ENST00000539493 NEURL4Q96JN8 1562 aa7.32□□□□□ -1.24
RAB3GAP1-207ENST00000539493 CNPY4Q8N129 248 aa7.32□□□□□ -1.24
RAB3GAP1-207ENST00000539493 TESK2Q96S53 571 aa7.32□□□□□ -1.24
RAB3GAP1-207ENST00000539493 ABCA6Q8N139 1617 aa7.32□□□□□ -1.24
RAB3GAP1-207ENST00000539493 UGGT1Q9NYU2 1555 aa7.31□□□□□ -1.24
RAB3GAP1-207ENST00000539493 COL17A1Q9UMD9 1497 aaPredicted RBP7.31□□□□□ -1.24
RAB3GAP1-207ENST00000539493 MAP3K4Q9Y6R4 1608 aa7.31□□□□□ -1.24
RAB3GAP1-207ENST00000539493 CYB5RLQ6IPT4 315 aa7.31□□□□□ -1.24
RAB3GAP1-207ENST00000539493 GEMIN8Q9NWZ8 242 aaKnown RBP7.31□□□□□ -1.24
RAB3GAP1-207ENST00000539493 RAPGEF3O95398 923 aa7.3□□□□□ -1.24
RAB3GAP1-207ENST00000539493 FAM9BQ8IZU0 186 aa7.3□□□□□ -1.24
RAB3GAP1-207ENST00000539493 DISP3Q9P2K9 1392 aa7.3□□□□□ -1.24
RAB3GAP1-207ENST00000539493 TICAM2Q86XR7 235 aa7.3□□□□□ -1.24
RAB3GAP1-207ENST00000539493 DNAJC2Q99543 621 aaKnown RBP7.3□□□□□ -1.24
RAB3GAP1-207ENST00000539493 RIMBP3CA6NJZ7 1639 aa7.3□□□□□ -1.24
RAB3GAP1-207ENST00000539493 RIMBP3BA6NNM3 1639 aa7.3□□□□□ -1.24
RAB3GAP1-207ENST00000539493 RIMBP3Q9UFD9 1639 aa7.3□□□□□ -1.24
RAB3GAP1-207ENST00000539493 VGLL3A8MV65 326 aa7.3□□□□□ -1.24
RAB3GAP1-207ENST00000539493 PTMAP06454 111 aaKnown RBP7.3□□□□□ -1.24
RAB3GAP1-207ENST00000539493 NPATQ14207 1427 aa7.29□□□□□ -1.24
RAB3GAP1-207ENST00000539493 SLC52A1Q9NWF4 448 aa7.29□□□□□ -1.24
RAB3GAP1-207ENST00000539493 GLI2P10070 1586 aa7.29□□□□□ -1.24
RAB3GAP1-207ENST00000539493 MCCP23508 829 aa7.29□□□□□ -1.24
RAB3GAP1-207ENST00000539493 GGT6Q6P531 493 aa7.29□□□□□ -1.24
RAB3GAP1-207ENST00000539493 TRIM44Q96DX7 344 aaPredicted RBP7.29□□□□□ -1.24
RAB3GAP1-207ENST00000539493 NUDCQ9Y266 331 aa7.29□□□□□ -1.24
RAB3GAP1-207ENST00000539493 DIP2CQ9Y2E4 1556 aa7.29□□□□□ -1.24
RAB3GAP1-207ENST00000539493 IQGAP1P46940 1657 aa7.29□□□□□ -1.24
RAB3GAP1-207ENST00000539493 RICTORQ6R327 1708 aa7.29□□□□□ -1.24
RAB3GAP1-207ENST00000539493 MYOM2P54296 1465 aa7.29□□□□□ -1.24
RAB3GAP1-207ENST00000539493 CEP120Q8N960 986 aa7.28□□□□□ -1.24
RAB3GAP1-207ENST00000539493 HDAC5Q9UQL6 1122 aa7.28□□□□□ -1.24
RAB3GAP1-207ENST00000539493 KTN1Q86UP2 1357 aaKnown RBP7.28□□□□□ -1.24
RAB3GAP1-207ENST00000539493 SCAF11Q99590 1463 aaKnown RBP7.28□□□□□ -1.24
RAB3GAP1-207ENST00000539493 ABCC3O15438 1527 aa7.28□□□□□ -1.24
RAB3GAP1-207ENST00000539493 SOX12O15370 315 aa7.28□□□□□ -1.24
RAB3GAP1-207ENST00000539493 PTMSP20962 102 aa7.28□□□□□ -1.24
RAB3GAP1-207ENST00000539493 TMF1P82094 1093 aa7.28□□□□□ -1.24
RAB3GAP1-207ENST00000539493 MROH2AA6NES4 1674 aa7.28□□□□□ -1.24
RAB3GAP1-207ENST00000539493 PHF14O94880 888 aa7.27□□□□□ -1.25
RAB3GAP1-207ENST00000539493 ADGRB3O60242 1522 aa7.27□□□□□ -1.25
RAB3GAP1-207ENST00000539493 KIF1BO60333 1816 aa7.27□□□□□ -1.25
RAB3GAP1-207ENST00000539493 KIAA1210Q9ULL0 1709 aa7.27□□□□□ -1.25
RAB3GAP1-207ENST00000539493 PER1O15534 1290 aaPredicted RBP7.27□□□□□ -1.25
RAB3GAP1-207ENST00000539493 HS1BP3Q53T59 392 aa7.27□□□□□ -1.25
RAB3GAP1-207ENST00000539493 PPP1R9BQ96SB3 815 aa7.27□□□□□ -1.25
RAB3GAP1-207ENST00000539493 IFT172Q9UG01 1749 aa7.27□□□□□ -1.25
RAB3GAP1-207ENST00000539493 IRX5P78411 483 aaPredicted RBP7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 PANK2Q9BZ23 570 aa7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 DIP2BQ9P265 1576 aa7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 NRXN1Q9ULB1 1477 aa7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 YEATS2Q9ULM3 1422 aa7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 ADGRF5Q8IZF2 1346 aa7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 RALBP1Q15311 655 aa7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 MYH16Q9H6N6 1097 aa7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 MYBBP1AQ9BQG0 1328 aaKnown RBP7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 TULP2O00295 520 aa7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 ZNF500O60304 480 aaPredicted RBP7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 FAM193AP78312 1265 aa7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 DNTTIP2Q5QJE6 756 aaKnown RBP7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 WWC1Q8IX03 1113 aa7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 TAOK2Q9UL54 1235 aa7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 CAMSAP1Q5T5Y3 1602 aa7.26□□□□□ -1.25
RAB3GAP1-207ENST00000539493 PARD3Q8TEW0 1356 aa7.25□□□□□ -1.25
RAB3GAP1-207ENST00000539493 ZSCAN30Q86W11 494 aa7.25□□□□□ -1.25
RAB3GAP1-207ENST00000539493 FAM69CQ0P6D2 419 aa7.25□□□□□ -1.25
RAB3GAP1-207ENST00000539493 PNISRQ8TF01 805 aaKnown RBP7.25□□□□□ -1.25
RAB3GAP1-207ENST00000539493 ANTXR1Q9H6X2 564 aa7.25□□□□□ -1.25
RAB3GAP1-207ENST00000539493 BRD4O60885 1362 aaPredicted RBP7.25□□□□□ -1.25
RAB3GAP1-207ENST00000539493 EIF3AQ14152 1382 aaKnown RBP7.25□□□□□ -1.25
RAB3GAP1-207ENST00000539493 CFAP70Q5T0N1 1121 aa7.24□□□□□ -1.25
RAB3GAP1-207ENST00000539493 TMC1Q8TDI8 760 aa7.24□□□□□ -1.25
RAB3GAP1-207ENST00000539493 NOS1P29475 1434 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms