RNA–Protein interactions for RNA: ENST00000539455.5

CELF1-220, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 5

Gene CELF1, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-220ENST00000539455 SPINK5Q9NQ38 1064 aaPredicted RBP8.38□□□□□ -1.07
CELF1-220ENST00000539455 FYCO1Q9BQS8 1478 aa8.38□□□□□ -1.07
CELF1-220ENST00000539455 CASKIN1Q8WXD9 1431 aa8.37□□□□□ -1.07
CELF1-220ENST00000539455 ONECUT3O60422 494 aaPredicted RBP8.37□□□□□ -1.07
CELF1-220ENST00000539455 SLIT2O94813 1529 aa8.37□□□□□ -1.07
CELF1-220ENST00000539455 CCDC141Q6ZP82 1450 aa8.36□□□□□ -1.07
CELF1-220ENST00000539455 ZFYVE9O95405 1425 aa8.36□□□□□ -1.07
CELF1-220ENST00000539455 HSPA6P17066 643 aa8.35□□□□□ -1.07
CELF1-220ENST00000539455 AMOTL2Q9Y2J4 779 aa8.35□□□□□ -1.07
CELF1-220ENST00000539455 COL22A1Q8NFW1 1626 aaPredicted RBP8.35□□□□□ -1.07
CELF1-220ENST00000539455 ADAMTS13Q76LX8 1427 aa8.35□□□□□ -1.07
CELF1-220ENST00000539455 PTPRUQ92729 1446 aa8.35□□□□□ -1.07
CELF1-220ENST00000539455 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.34□□□□□ -1.07
CELF1-220ENST00000539455 ADGRB3O60242 1522 aa8.34□□□□□ -1.07
CELF1-220ENST00000539455 VPS72Q15906 364 aa8.34□□□□□ -1.07
CELF1-220ENST00000539455 PPARGC1BQ86YN6 1023 aaKnown RBP8.34□□□□□ -1.07
CELF1-220ENST00000539455 TNS4Q8IZW8 715 aa8.34□□□□□ -1.07
CELF1-220ENST00000539455 CEP152O94986 1710 aa8.34□□□□□ -1.07
CELF1-220ENST00000539455 MTUS2Q5JR59 1369 aa8.34□□□□□ -1.07
CELF1-220ENST00000539455 PIK3R4Q99570 1358 aa8.34□□□□□ -1.07
CELF1-220ENST00000539455 A0A0G2JS52 829 aa8.33□□□□□ -1.08
CELF1-220ENST00000539455 MYT1Q01538 1121 aa8.33□□□□□ -1.08
CELF1-220ENST00000539455 TRPM2O94759 1503 aa8.33□□□□□ -1.08
CELF1-220ENST00000539455 LAMC1P11047 1609 aa8.32□□□□□ -1.08
CELF1-220ENST00000539455 C1orf167Q5SNV9 1468 aa8.32□□□□□ -1.08
CELF1-220ENST00000539455 NRKQ7Z2Y5 1582 aa8.32□□□□□ -1.08
CELF1-220ENST00000539455 RIMS2Q9UQ26 1411 aa8.32□□□□□ -1.08
CELF1-220ENST00000539455 PARD3Q8TEW0 1356 aa8.32□□□□□ -1.08
CELF1-220ENST00000539455 RGPD1P0DJD0 1748 aa8.32□□□□□ -1.08
CELF1-220ENST00000539455 CHD4Q14839 1912 aa8.31□□□□□ -1.08
CELF1-220ENST00000539455 ADGRL3Q9HAR2 1447 aa8.31□□□□□ -1.08
CELF1-220ENST00000539455 NBPF8Q3BBV2 869 aa8.31□□□□□ -1.08
CELF1-220ENST00000539455 NBPF14Q5TI25 921 aa8.31□□□□□ -1.08
CELF1-220ENST00000539455 ORAI2Q96SN7 254 aa8.31□□□□□ -1.08
CELF1-220ENST00000539455 CCDC9Q9Y3X0 531 aaKnown RBP8.31□□□□□ -1.08
CELF1-220ENST00000539455 TNS1Q9HBL0 1735 aaKnown RBP8.31□□□□□ -1.08
CELF1-220ENST00000539455 EHBP1L1Q8N3D4 1523 aa8.3□□□□□ -1.08
CELF1-220ENST00000539455 SHANK3Q9BYB0 1731 aa8.3□□□□□ -1.08
CELF1-220ENST00000539455 FAM83GA6ND36 823 aa8.3□□□□□ -1.08
CELF1-220ENST00000539455 KANK4Q5T7N3 995 aaPredicted RBP8.3□□□□□ -1.08
CELF1-220ENST00000539455 SYT17Q9BSW7 474 aa8.3□□□□□ -1.08
CELF1-220ENST00000539455 NOS1P29475 1434 aa8.29□□□□□ -1.08
CELF1-220ENST00000539455 EIF2AK4Q9P2K8 1649 aaKnown RBP8.29□□□□□ -1.08
CELF1-220ENST00000539455 RSPH4AQ5TD94 716 aa8.29□□□□□ -1.08
CELF1-220ENST00000539455 FHDC1Q9C0D6 1143 aaPredicted RBP8.29□□□□□ -1.08
CELF1-220ENST00000539455 PDGFDQ9GZP0 370 aaPredicted RBP8.29□□□□□ -1.08
CELF1-220ENST00000539455 RPRD2Q5VT52 1461 aaKnown RBP8.29□□□□□ -1.08
CELF1-220ENST00000539455 MYOM1P52179 1685 aa8.29□□□□□ -1.08
CELF1-220ENST00000539455 ADGRB2O60241 1585 aa8.28□□□□□ -1.08
CELF1-220ENST00000539455 TRIM37O94972 964 aa8.28□□□□□ -1.08
CELF1-220ENST00000539455 APBA3O96018 575 aa8.28□□□□□ -1.08
CELF1-220ENST00000539455 PTGER2P43116 358 aa8.28□□□□□ -1.08
CELF1-220ENST00000539455 FAM98CQ17RN3 349 aaKnown RBP8.28□□□□□ -1.08
CELF1-220ENST00000539455 MARF1Q9Y4F3 1742 aaKnown RBP8.27□□□□□ -1.09
CELF1-220ENST00000539455 TSPY4P0CV99 314 aa8.27□□□□□ -1.09
CELF1-220ENST00000539455 TSPY10P0CW01 314 aa8.27□□□□□ -1.09
CELF1-220ENST00000539455 HDGFP51858 240 aaKnown RBP8.27□□□□□ -1.09
CELF1-220ENST00000539455 XPCQ01831 940 aaPredicted RBP8.27□□□□□ -1.09
CELF1-220ENST00000539455 CACNB1Q02641 598 aaPredicted RBP8.27□□□□□ -1.09
CELF1-220ENST00000539455 NUP188Q5SRE5 1749 aa8.26□□□□□ -1.09
CELF1-220ENST00000539455 PLEKHG5O94827 1062 aa8.26□□□□□ -1.09
CELF1-220ENST00000539455 ZBTB7AO95365 584 aa8.26□□□□□ -1.09
CELF1-220ENST00000539455 SLC52A1Q9NWF4 448 aa8.26□□□□□ -1.09
CELF1-220ENST00000539455 RREB1Q92766 1687 aa8.25□□□□□ -1.09
CELF1-220ENST00000539455 DNAJC5GQ8N7S2 189 aa8.25□□□□□ -1.09
CELF1-220ENST00000539455 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.25□□□□□ -1.09
CELF1-220ENST00000539455 PXDNQ92626 1479 aa8.25□□□□□ -1.09
CELF1-220ENST00000539455 XRN1Q8IZH2 1706 aaKnown RBP8.24□□□□□ -1.09
CELF1-220ENST00000539455 POLA2Q14181 598 aa8.24□□□□□ -1.09
CELF1-220ENST00000539455 TMEM131LA2VDJ0 1609 aa8.24□□□□□ -1.09
CELF1-220ENST00000539455 NPHP3Q7Z494 1330 aa8.24□□□□□ -1.09
CELF1-220ENST00000539455 GPR162Q16538 588 aa8.23□□□□□ -1.09
CELF1-220ENST00000539455 ADGRL2O95490 1459 aa8.23□□□□□ -1.09
CELF1-220ENST00000539455 DLC1Q96QB1 1528 aa8.23□□□□□ -1.09
CELF1-220ENST00000539455 ZNF526Q8TF50 670 aaPredicted RBP8.22□□□□□ -1.09
CELF1-220ENST00000539455 ANO8Q9HCE9 1232 aaPredicted RBP8.22□□□□□ -1.09
CELF1-220ENST00000539455 ARHGEF5Q12774 1597 aa8.22□□□□□ -1.09
CELF1-220ENST00000539455 USP32Q8NFA0 1604 aa8.21□□□□□ -1.09
CELF1-220ENST00000539455 ATP10DQ9P241 1426 aa8.21□□□□□ -1.09
CELF1-220ENST00000539455 NALCNQ8IZF0 1738 aa8.21□□□□□ -1.09
CELF1-220ENST00000539455 LMTK2Q8IWU2 1503 aa8.21□□□□□ -1.1
CELF1-220ENST00000539455 ABCB7O75027 752 aa8.21□□□□□ -1.1
CELF1-220ENST00000539455 DSG3P32926 999 aa8.21□□□□□ -1.1
CELF1-220ENST00000539455 FAM196AQ6ZSG2 479 aa8.21□□□□□ -1.1
CELF1-220ENST00000539455 PELP1Q8IZL8 1130 aaKnown RBP8.21□□□□□ -1.1
CELF1-220ENST00000539455 APLP1P51693 650 aa8.2□□□□□ -1.1
CELF1-220ENST00000539455 HTRA3P83110 453 aa8.2□□□□□ -1.1
CELF1-220ENST00000539455 WWC3Q9ULE0 1092 aa8.2□□□□□ -1.1
CELF1-220ENST00000539455 PTPN23Q9H3S7 1636 aa8.2□□□□□ -1.1
CELF1-220ENST00000539455 KANK1Q14678 1352 aa8.2□□□□□ -1.1
CELF1-220ENST00000539455 CASZ1Q86V15 1759 aa8.2□□□□□ -1.1
CELF1-220ENST00000539455 MYO5BQ9ULV0 1848 aa8.19□□□□□ -1.1
CELF1-220ENST00000539455 DUOX2Q9NRD8 1548 aa8.19□□□□□ -1.1
CELF1-220ENST00000539455 FOXO3O43524 673 aa8.19□□□□□ -1.1
CELF1-220ENST00000539455 SGIP1Q9BQI5 828 aa8.19□□□□□ -1.1
CELF1-220ENST00000539455 GPBP1L1Q9HC44 474 aaPredicted RBP8.19□□□□□ -1.1
CELF1-220ENST00000539455 METP08581 1390 aa8.19□□□□□ -1.1
CELF1-220ENST00000539455 TRIM26Q12899 539 aaPredicted RBP8.18□□□□□ -1.1
CELF1-220ENST00000539455 CABLES1Q8TDN4 633 aa8.18□□□□□ -1.1
CELF1-220ENST00000539455 ZBTB12Q9Y330 459 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms