RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 TRMT2AQ8IZ69 625 aaKnown RBP23.62■■□□□ 1.37
GNE-204ENST00000539208 CGNL1Q0VF96 1302 aa23.61■■□□□ 1.37
GNE-204ENST00000539208 NSD2O96028 1365 aa23.61■■□□□ 1.37
GNE-204ENST00000539208 NINLQ9Y2I6 1382 aa23.61■■□□□ 1.37
GNE-204ENST00000539208 SLFN5Q08AF3 891 aa23.61■■□□□ 1.37
GNE-204ENST00000539208 FBXO31Q5XUX0 539 aaPredicted RBP23.59■■□□□ 1.37
GNE-204ENST00000539208 PTPRMP28827 1452 aa23.58■■□□□ 1.37
GNE-204ENST00000539208 APAF1O14727 1248 aa23.58■■□□□ 1.36
GNE-204ENST00000539208 CCDC146Q8IYE0 955 aa23.58■■□□□ 1.36
GNE-204ENST00000539208 SHPRHQ149N8 1683 aa23.57■■□□□ 1.36
GNE-204ENST00000539208 ANP32EQ9BTT0 268 aa23.57■■□□□ 1.36
GNE-204ENST00000539208 SPATA31D1Q6ZQQ2 1576 aa23.56■■□□□ 1.36
GNE-204ENST00000539208 YTHDC2Q9H6S0 1430 aaKnown RBP23.56■■□□□ 1.36
GNE-204ENST00000539208 CLTCQ00610 1675 aaKnown RBP23.55■■□□□ 1.36
GNE-204ENST00000539208 ALKQ9UM73 1620 aa23.54■■□□□ 1.36
GNE-204ENST00000539208 PLIN1O60240 522 aa23.54■■□□□ 1.36
GNE-204ENST00000539208 CABP2Q9NPB3 220 aa23.53■■□□□ 1.36
GNE-204ENST00000539208 E9PSI1 815 aa23.52■■□□□ 1.36
GNE-204ENST00000539208 STK26Q9P289 416 aa23.51■■□□□ 1.35
GNE-204ENST00000539208 ATAD2Q6PL18 1390 aa23.51■■□□□ 1.35
GNE-204ENST00000539208 NKTRP30414 1462 aaKnown RBP23.51■■□□□ 1.35
GNE-204ENST00000539208 CRBNQ96SW2 442 aa23.5■■□□□ 1.35
GNE-204ENST00000539208 A2ML1A8K2U0 1454 aa23.5■■□□□ 1.35
GNE-204ENST00000539208 ARHGEF40Q8TER5 1519 aa23.5■■□□□ 1.35
GNE-204ENST00000539208 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.5■■□□□ 1.35
GNE-204ENST00000539208 ABCC11Q96J66 1382 aa23.49■■□□□ 1.35
GNE-204ENST00000539208 MSH5O43196 834 aa23.49■■□□□ 1.35
GNE-204ENST00000539208 CFAP53Q96M91 514 aa23.48■■□□□ 1.35
GNE-204ENST00000539208 STAG3Q9UJ98 1225 aa23.48■■□□□ 1.35
GNE-204ENST00000539208 MTHFSP49914 203 aa23.48■■□□□ 1.35
GNE-204ENST00000539208 PRAM1Q96QH2 718 aa23.48■■□□□ 1.35
GNE-204ENST00000539208 SAFB2Q14151 953 aaKnown RBP eCLIP23.47■■□□□ 1.35
GNE-204ENST00000539208 RUNDC1Q96C34 613 aa23.47■■□□□ 1.35
GNE-204ENST00000539208 A0A1W2PP64 1363 aa23.47■■□□□ 1.35
GNE-204ENST00000539208 SRPK2P78362 688 aaKnown RBP23.47■■□□□ 1.35
GNE-204ENST00000539208 SPINK5Q9NQ38 1064 aaPredicted RBP23.47■■□□□ 1.35
GNE-204ENST00000539208 DLC1Q96QB1 1528 aa23.46■■□□□ 1.35
GNE-204ENST00000539208 TNNT2P45379 298 aaPredicted RBP23.46■■□□□ 1.35
GNE-204ENST00000539208 NCBP3Q53F19 620 aaKnown RBP23.46■■□□□ 1.35
GNE-204ENST00000539208 POGKQ9P215 609 aa23.46■■□□□ 1.35
GNE-204ENST00000539208 KIF13AQ9H1H9 1805 aa23.46■■□□□ 1.35
GNE-204ENST00000539208 TCERG1O14776 1098 aaKnown RBP23.45■■□□□ 1.35
GNE-204ENST00000539208 IQSEC2Q5JU85 1478 aa23.45■■□□□ 1.34
GNE-204ENST00000539208 MED14O60244 1454 aa23.45■■□□□ 1.34
GNE-204ENST00000539208 WWC1Q8IX03 1113 aa23.44■■□□□ 1.34
GNE-204ENST00000539208 C20orf194Q5TEA3 1177 aa23.44■■□□□ 1.34
GNE-204ENST00000539208 TERF2IPQ9NYB0 399 aa23.44■■□□□ 1.34
GNE-204ENST00000539208 RIMS2Q9UQ26 1411 aa23.43■■□□□ 1.34
GNE-204ENST00000539208 PHF23Q9BUL5 403 aaPredicted RBP23.43■■□□□ 1.34
GNE-204ENST00000539208 MINK1Q8N4C8 1332 aaPredicted RBP23.42■■□□□ 1.34
GNE-204ENST00000539208 CD163L1Q9NR16 1453 aa23.42■■□□□ 1.34
GNE-204ENST00000539208 SETD1AO15047 1707 aaKnown RBP23.41■■□□□ 1.34
GNE-204ENST00000539208 ANKRD26Q9UPS8 1709 aa23.41■■□□□ 1.34
GNE-204ENST00000539208 MS4A1P11836 297 aa23.4■■□□□ 1.34
GNE-204ENST00000539208 CCDC27Q2M243 656 aa23.4■■□□□ 1.34
GNE-204ENST00000539208 DMRT2Q9Y5R5 561 aa23.4■■□□□ 1.34
GNE-204ENST00000539208 TCP11L2Q8N4U5 519 aa23.38■■□□□ 1.33
GNE-204ENST00000539208 WDR63Q8IWG1 891 aa23.38■■□□□ 1.33
GNE-204ENST00000539208 CDK19Q9BWU1 502 aa23.38■■□□□ 1.33
GNE-204ENST00000539208 NLRP1Q9C000 1473 aa23.38■■□□□ 1.33
GNE-204ENST00000539208 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
GNE-204ENST00000539208 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.36■■□□□ 1.33
GNE-204ENST00000539208 ZMYM3Q14202 1370 aa23.36■■□□□ 1.33
GNE-204ENST00000539208 MLECQ14165 292 aa23.35■■□□□ 1.33
GNE-204ENST00000539208 HDGFL2Q7Z4V5 671 aaPredicted RBP23.35■■□□□ 1.33
GNE-204ENST00000539208 FYB1O15117 783 aa23.35■■□□□ 1.33
GNE-204ENST00000539208 KDM2BQ8NHM5 1336 aa23.35■■□□□ 1.33
GNE-204ENST00000539208 ADGRB2O60241 1585 aa23.34■■□□□ 1.33
GNE-204ENST00000539208 NRXN3Q9Y4C0 1643 aa23.33■■□□□ 1.33
GNE-204ENST00000539208 COL3A1P02461 1466 aaPredicted RBP23.32■■□□□ 1.32
GNE-204ENST00000539208 CENPQQ7L2Z9 268 aaPredicted RBP23.32■■□□□ 1.32
GNE-204ENST00000539208 GGNBP2Q9H3C7 697 aa23.32■■□□□ 1.32
GNE-204ENST00000539208 ESF1Q9H501 851 aaKnown RBP23.32■■□□□ 1.32
GNE-204ENST00000539208 BCAR3O75815 825 aa23.31■■□□□ 1.32
GNE-204ENST00000539208 ATP7BP35670 1465 aa23.31■■□□□ 1.32
GNE-204ENST00000539208 U2AF1L5P0DN76 240 aaPredicted RBP23.3■■□□□ 1.32
GNE-204ENST00000539208 U2AF1Q01081 240 aaKnown RBP eCLIP23.3■■□□□ 1.32
GNE-204ENST00000539208 PDE3AQ14432 1141 aa23.3■■□□□ 1.32
GNE-204ENST00000539208 CABP1Q9NZU7 370 aa23.3■■□□□ 1.32
GNE-204ENST00000539208 KIF20BQ96Q89 1820 aa23.29■■□□□ 1.32
GNE-204ENST00000539208 HDGFP51858 240 aaKnown RBP23.29■■□□□ 1.32
GNE-204ENST00000539208 RRP7AQ9Y3A4 280 aaKnown RBP23.29■■□□□ 1.32
GNE-204ENST00000539208 NEUROD2Q15784 382 aa23.28■■□□□ 1.32
GNE-204ENST00000539208 SIRT1Q96EB6 747 aa23.28■■□□□ 1.32
GNE-204ENST00000539208 PDE4AP27815 886 aa23.27■■□□□ 1.32
GNE-204ENST00000539208 WAPLQ7Z5K2 1190 aa23.27■■□□□ 1.32
GNE-204ENST00000539208 PNPLA6Q8IY17 1366 aa23.27■■□□□ 1.32
GNE-204ENST00000539208 ANP32AP39687 249 aaKnown RBP23.27■■□□□ 1.32
GNE-204ENST00000539208 BACH2Q9BYV9 841 aa23.27■■□□□ 1.32
GNE-204ENST00000539208 ERICH6Q7L0X2 663 aa23.26■■□□□ 1.31
GNE-204ENST00000539208 KNDC1Q76NI1 1749 aa23.26■■□□□ 1.31
GNE-204ENST00000539208 PLEKHF1Q96S99 279 aa23.25■■□□□ 1.31
GNE-204ENST00000539208 TNRQ92752 1358 aa23.25■■□□□ 1.31
GNE-204ENST00000539208 TECPR2O15040 1411 aa23.25■■□□□ 1.31
GNE-204ENST00000539208 FAM135BQ49AJ0 1406 aa23.25■■□□□ 1.31
GNE-204ENST00000539208 METP08581 1390 aa23.24■■□□□ 1.31
GNE-204ENST00000539208 MYH16Q9H6N6 1097 aa23.24■■□□□ 1.31
GNE-204ENST00000539208 RARSP54136 660 aaKnown RBP23.23■■□□□ 1.31
GNE-204ENST00000539208 IPO9Q96P70 1041 aaKnown RBP23.22■■□□□ 1.31
GNE-204ENST00000539208 CPSF1Q10570 1443 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms