RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 VGFO15240 615 aaPredicted RBP17.19■□□□□ 0.34
PLXNB3-209ENST00000538966 RUNDC1Q96C34 613 aa17.19■□□□□ 0.34
PLXNB3-209ENST00000538966 HOOK1Q9UJC3 728 aaKnown RBP17.18■□□□□ 0.34
PLXNB3-209ENST00000538966 RNF214Q8ND24 703 aa17.18■□□□□ 0.34
PLXNB3-209ENST00000538966 NUCB2P80303 420 aa17.18■□□□□ 0.34
PLXNB3-209ENST00000538966 TSPYL4Q9UJ04 414 aa17.17■□□□□ 0.34
PLXNB3-209ENST00000538966 IGF1RP08069 1367 aa17.17■□□□□ 0.34
PLXNB3-209ENST00000538966 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
PLXNB3-209ENST00000538966 MNS1Q8NEH6 495 aa17.16■□□□□ 0.34
PLXNB3-209ENST00000538966 ERICH2A1L162 156 aa17.16■□□□□ 0.34
PLXNB3-209ENST00000538966 AIMP1Q12904 312 aaKnown RBP17.16■□□□□ 0.34
PLXNB3-209ENST00000538966 CCDC27Q2M243 656 aa17.16■□□□□ 0.34
PLXNB3-209ENST00000538966 ROCK1Q13464 1354 aa17.16■□□□□ 0.34
PLXNB3-209ENST00000538966 FYB1O15117 783 aa17.16■□□□□ 0.34
PLXNB3-209ENST00000538966 CCDC73Q6ZRK6 1079 aa17.16■□□□□ 0.34
PLXNB3-209ENST00000538966 NEUROD6Q96NK8 337 aa17.15■□□□□ 0.34
PLXNB3-209ENST00000538966 PRDM2Q13029 1718 aa17.15■□□□□ 0.34
PLXNB3-209ENST00000538966 DDX58O95786 925 aaKnown RBP17.15■□□□□ 0.34
PLXNB3-209ENST00000538966 PDILTQ8N807 584 aa17.15■□□□□ 0.34
PLXNB3-209ENST00000538966 NASPP49321 788 aaPredicted RBP17.14■□□□□ 0.33
PLXNB3-209ENST00000538966 RUFY1Q96T51 708 aa17.14■□□□□ 0.33
PLXNB3-209ENST00000538966 TTLL5Q6EMB2 1281 aa17.13■□□□□ 0.33
PLXNB3-209ENST00000538966 WASHC4Q2M389 1173 aa17.13■□□□□ 0.33
PLXNB3-209ENST00000538966 MTMR7Q9Y216 660 aa17.13■□□□□ 0.33
PLXNB3-209ENST00000538966 KIF7Q2M1P5 1343 aa17.12■□□□□ 0.33
PLXNB3-209ENST00000538966 CDC45O75419 566 aa17.12■□□□□ 0.33
PLXNB3-209ENST00000538966 ERC2O15083 957 aa17.11■□□□□ 0.33
PLXNB3-209ENST00000538966 PSME1Q06323 249 aa17.11■□□□□ 0.33
PLXNB3-209ENST00000538966 GGNBP2Q9H3C7 697 aa17.11■□□□□ 0.33
PLXNB3-209ENST00000538966 CAVIN1Q6NZI2 390 aaKnown RBP17.11■□□□□ 0.33
PLXNB3-209ENST00000538966 RIC3Q7Z5B4 369 aa17.11■□□□□ 0.33
PLXNB3-209ENST00000538966 GNAI1P63096 354 aa17.1■□□□□ 0.33
PLXNB3-209ENST00000538966 CCDC39Q9UFE4 941 aa17.1■□□□□ 0.33
PLXNB3-209ENST00000538966 SAFBQ15424 915 aaKnown RBP eCLIP17.1■□□□□ 0.33
PLXNB3-209ENST00000538966 NUTM2GQ5VZR2 741 aa17.1■□□□□ 0.33
PLXNB3-209ENST00000538966 MYOM3Q5VTT5 1437 aa17.1■□□□□ 0.33
PLXNB3-209ENST00000538966 AK7Q96M32 723 aa17.1■□□□□ 0.33
PLXNB3-209ENST00000538966 ARGLU1Q9NWB6 273 aaPredicted RBP17.1■□□□□ 0.33
PLXNB3-209ENST00000538966 PKNOX2Q96KN3 472 aa17.1■□□□□ 0.33
PLXNB3-209ENST00000538966 CCDC7Q96M83 1385 aa17.09■□□□□ 0.33
PLXNB3-209ENST00000538966 OSCARQ8IYS5 282 aa17.09■□□□□ 0.33
PLXNB3-209ENST00000538966 RALYLQ86SE5 291 aaKnown RBP17.09■□□□□ 0.33
PLXNB3-209ENST00000538966 OLFM4Q6UX06 510 aa17.09■□□□□ 0.33
PLXNB3-209ENST00000538966 TRAK2O60296 914 aa17.08■□□□□ 0.33
PLXNB3-209ENST00000538966 CDCA7LQ96GN5 454 aa17.08■□□□□ 0.33
PLXNB3-209ENST00000538966 MRE11P49959 708 aa17.08■□□□□ 0.33
PLXNB3-209ENST00000538966 CCDC43Q96MW1 224 aaKnown RBP17.08■□□□□ 0.32
PLXNB3-209ENST00000538966 KIF21BO75037 1637 aa17.08■□□□□ 0.32
PLXNB3-209ENST00000538966 CABP2Q9NPB3 220 aa17.08■□□□□ 0.32
PLXNB3-209ENST00000538966 SKIDA1Q1XH10 827 aa17.07■□□□□ 0.32
PLXNB3-209ENST00000538966 BRPF3Q9ULD4 1205 aa17.07■□□□□ 0.32
PLXNB3-209ENST00000538966 UBTFL1P0CB47 393 aaPredicted RBP17.07■□□□□ 0.32
PLXNB3-209ENST00000538966 C1orf115Q9H7X2 142 aa17.07■□□□□ 0.32
PLXNB3-209ENST00000538966 ADAMTS8Q9UP79 889 aa17.07■□□□□ 0.32
PLXNB3-209ENST00000538966 SDF4Q9BRK5 362 aa17.07■□□□□ 0.32
PLXNB3-209ENST00000538966 HSP90AB4PQ58FF6 505 aa17.07■□□□□ 0.32
PLXNB3-209ENST00000538966 CT47A1Q5JQC4 288 aaPredicted RBP17.06■□□□□ 0.32
PLXNB3-209ENST00000538966 CAGE1Q8TC20 777 aa17.06■□□□□ 0.32
PLXNB3-209ENST00000538966 AQRO60306 1485 aaKnown RBP eCLIP17.06■□□□□ 0.32
PLXNB3-209ENST00000538966 PRPF40AO75400 957 aaKnown RBP17.06■□□□□ 0.32
PLXNB3-209ENST00000538966 RRP12Q5JTH9 1297 aaKnown RBP17.05■□□□□ 0.32
PLXNB3-209ENST00000538966 FGD6Q6ZV73 1430 aa17.05■□□□□ 0.32
PLXNB3-209ENST00000538966 FSD1Q9BTV5 496 aa17.05■□□□□ 0.32
PLXNB3-209ENST00000538966 TRIM5Q9C035 493 aa17.05■□□□□ 0.32
PLXNB3-209ENST00000538966 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.05■□□□□ 0.32
PLXNB3-209ENST00000538966 NAT10Q9H0A0 1025 aaKnown RBP17.05■□□□□ 0.32
PLXNB3-209ENST00000538966 SMC2O95347 1197 aa17.05■□□□□ 0.32
PLXNB3-209ENST00000538966 HSP90B2PQ58FF3 399 aa17.05■□□□□ 0.32
PLXNB3-209ENST00000538966 CNTLNQ9NXG0 1405 aa17.04■□□□□ 0.32
PLXNB3-209ENST00000538966 CALRP27797 417 aaKnown RBP17.04■□□□□ 0.32
PLXNB3-209ENST00000538966 ATP2B1P20020 1258 aa17.04■□□□□ 0.32
PLXNB3-209ENST00000538966 CNTROBQ8N137 903 aa17.04■□□□□ 0.32
PLXNB3-209ENST00000538966 DNAJC2Q99543 621 aaKnown RBP17.04■□□□□ 0.32
PLXNB3-209ENST00000538966 NINLQ9Y2I6 1382 aa17.04■□□□□ 0.32
PLXNB3-209ENST00000538966 GRIN2BQ13224 1484 aa17.04■□□□□ 0.32
PLXNB3-209ENST00000538966 ERICH3Q5RHP9 1530 aa17.04■□□□□ 0.32
PLXNB3-209ENST00000538966 EPS15P42566 896 aa17.04■□□□□ 0.32
PLXNB3-209ENST00000538966 RBM10P98175 930 aaKnown RBP17.04■□□□□ 0.32
PLXNB3-209ENST00000538966 CEBPZQ03701 1054 aaKnown RBP17.04■□□□□ 0.32
PLXNB3-209ENST00000538966 FMNL2Q96PY5 1086 aa17.04■□□□□ 0.32
PLXNB3-209ENST00000538966 ACBD3Q9H3P7 528 aa17.04■□□□□ 0.32
PLXNB3-209ENST00000538966 ZNF428Q96B54 188 aa17.03■□□□□ 0.32
PLXNB3-209ENST00000538966 SPC24Q8NBT2 197 aa17.03■□□□□ 0.32
PLXNB3-209ENST00000538966 TSPY26PQ9H489 355 aa17.03■□□□□ 0.32
PLXNB3-209ENST00000538966 PDZRN3Q9UPQ7 1066 aa17.03■□□□□ 0.32
PLXNB3-209ENST00000538966 FYCO1Q9BQS8 1478 aa17.02■□□□□ 0.32
PLXNB3-209ENST00000538966 CASKIN1Q8WXD9 1431 aa17.02■□□□□ 0.32
PLXNB3-209ENST00000538966 NEK4P51957 841 aa17.02■□□□□ 0.32
PLXNB3-209ENST00000538966 ZFYVE27Q5T4F4 411 aa17.02■□□□□ 0.32
PLXNB3-209ENST00000538966 LRRC9Q6ZRR7 1453 aa17.02■□□□□ 0.31
PLXNB3-209ENST00000538966 PSMA5P28066 241 aa17.02■□□□□ 0.31
PLXNB3-209ENST00000538966 TMEM132EQ6IEE7 984 aa17.02■□□□□ 0.31
PLXNB3-209ENST00000538966 ODF2Q5BJF6 829 aa17.01■□□□□ 0.31
PLXNB3-209ENST00000538966 RBM33Q96EV2 1170 aaKnown RBP17.01■□□□□ 0.31
PLXNB3-209ENST00000538966 HSP90AB2PQ58FF8 381 aa17.01■□□□□ 0.31
PLXNB3-209ENST00000538966 MPNDQ8N594 471 aa17.01■□□□□ 0.31
PLXNB3-209ENST00000538966 NOM1Q5C9Z4 860 aaKnown RBP17.01■□□□□ 0.31
PLXNB3-209ENST00000538966 ZNF644Q9H582 1327 aaPredicted RBP17.01■□□□□ 0.31
PLXNB3-209ENST00000538966 CDR1P51861 262 aa17.01■□□□□ 0.31
PLXNB3-209ENST00000538966 BRPF1P55201 1214 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms