RNA–Protein interactions for RNA: ENST00000537728.5

ATP6V0A1-204, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2 BASIC

Gene ATP6V0A1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-204ENST00000537728 ZFYVE9O95405 1425 aa20.59■□□□□ 0.89
ATP6V0A1-204ENST00000537728 TULP4Q9NRJ4 1543 aa20.59■□□□□ 0.89
ATP6V0A1-204ENST00000537728 TNNT2P45379 298 aaPredicted RBP20.59■□□□□ 0.89
ATP6V0A1-204ENST00000537728 SLFN5Q08AF3 891 aa20.58■□□□□ 0.89
ATP6V0A1-204ENST00000537728 PUS7Q96PZ0 661 aaKnown RBP20.57■□□□□ 0.88
ATP6V0A1-204ENST00000537728 SAFB2Q14151 953 aaKnown RBP eCLIP20.57■□□□□ 0.88
ATP6V0A1-204ENST00000537728 CGNL1Q0VF96 1302 aa20.57■□□□□ 0.88
ATP6V0A1-204ENST00000537728 ERICH6Q7L0X2 663 aa20.57■□□□□ 0.88
ATP6V0A1-204ENST00000537728 STK26Q9P289 416 aa20.57■□□□□ 0.88
ATP6V0A1-204ENST00000537728 SHPRHQ149N8 1683 aa20.55■□□□□ 0.88
ATP6V0A1-204ENST00000537728 CABP2Q9NPB3 220 aa20.55■□□□□ 0.88
ATP6V0A1-204ENST00000537728 FBXO31Q5XUX0 539 aaPredicted RBP20.54■□□□□ 0.88
ATP6V0A1-204ENST00000537728 ANKRD36BQ8N2N9 1353 aa20.54■□□□□ 0.88
ATP6V0A1-204ENST00000537728 NGEFQ8N5V2 710 aa20.54■□□□□ 0.88
ATP6V0A1-204ENST00000537728 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.54■□□□□ 0.88
ATP6V0A1-204ENST00000537728 C20orf194Q5TEA3 1177 aa20.53■□□□□ 0.88
ATP6V0A1-204ENST00000537728 TRMT2AQ8IZ69 625 aaKnown RBP20.52■□□□□ 0.88
ATP6V0A1-204ENST00000537728 STAG3Q9UJ98 1225 aa20.52■□□□□ 0.88
ATP6V0A1-204ENST00000537728 E9PSI1 815 aa20.51■□□□□ 0.87
ATP6V0A1-204ENST00000537728 NKTRP30414 1462 aaKnown RBP20.51■□□□□ 0.87
ATP6V0A1-204ENST00000537728 SPINK5Q9NQ38 1064 aaPredicted RBP20.51■□□□□ 0.87
ATP6V0A1-204ENST00000537728 CLTCQ00610 1675 aaKnown RBP20.5■□□□□ 0.87
ATP6V0A1-204ENST00000537728 TCERG1O14776 1098 aaKnown RBP20.5■□□□□ 0.87
ATP6V0A1-204ENST00000537728 SRPK2P78362 688 aaKnown RBP20.5■□□□□ 0.87
ATP6V0A1-204ENST00000537728 MTHFSP49914 203 aa20.49■□□□□ 0.87
ATP6V0A1-204ENST00000537728 CFAP53Q96M91 514 aa20.49■□□□□ 0.87
ATP6V0A1-204ENST00000537728 REREQ9P2R6 1566 aa20.49■□□□□ 0.87
ATP6V0A1-204ENST00000537728 NSD2O96028 1365 aa20.49■□□□□ 0.87
ATP6V0A1-204ENST00000537728 POGKQ9P215 609 aa20.48■□□□□ 0.87
ATP6V0A1-204ENST00000537728 PTPRMP28827 1452 aa20.48■□□□□ 0.87
ATP6V0A1-204ENST00000537728 YTHDC2Q9H6S0 1430 aaKnown RBP20.47■□□□□ 0.87
ATP6V0A1-204ENST00000537728 AGLP35573 1532 aa20.47■□□□□ 0.87
ATP6V0A1-204ENST00000537728 RUNDC1Q96C34 613 aa20.46■□□□□ 0.87
ATP6V0A1-204ENST00000537728 NINLQ9Y2I6 1382 aa20.46■□□□□ 0.87
ATP6V0A1-204ENST00000537728 MINK1Q8N4C8 1332 aaPredicted RBP20.46■□□□□ 0.87
ATP6V0A1-204ENST00000537728 PRAM1Q96QH2 718 aa20.46■□□□□ 0.87
ATP6V0A1-204ENST00000537728 ALKQ9UM73 1620 aa20.46■□□□□ 0.87
ATP6V0A1-204ENST00000537728 ANP32AP39687 249 aaKnown RBP20.45■□□□□ 0.86
ATP6V0A1-204ENST00000537728 WWC1Q8IX03 1113 aa20.45■□□□□ 0.86
ATP6V0A1-204ENST00000537728 PPP6R1Q9UPN7 881 aa20.45■□□□□ 0.86
ATP6V0A1-204ENST00000537728 DMRT2Q9Y5R5 561 aa20.45■□□□□ 0.86
ATP6V0A1-204ENST00000537728 A0A1W2PP64 1363 aa20.44■□□□□ 0.86
ATP6V0A1-204ENST00000537728 NEUROD2Q15784 382 aa20.44■□□□□ 0.86
ATP6V0A1-204ENST00000537728 ATAD2Q6PL18 1390 aa20.43■□□□□ 0.86
ATP6V0A1-204ENST00000537728 MLECQ14165 292 aa20.42■□□□□ 0.86
ATP6V0A1-204ENST00000537728 MS4A1P11836 297 aa20.42■□□□□ 0.86
ATP6V0A1-204ENST00000537728 RRP7AQ9Y3A4 280 aaKnown RBP20.42■□□□□ 0.86
ATP6V0A1-204ENST00000537728 TCP11L2Q8N4U5 519 aa20.41■□□□□ 0.86
ATP6V0A1-204ENST00000537728 ABCC11Q96J66 1382 aa20.41■□□□□ 0.86
ATP6V0A1-204ENST00000537728 BCAR3O75815 825 aa20.41■□□□□ 0.86
ATP6V0A1-204ENST00000537728 IQSEC2Q5JU85 1478 aa20.41■□□□□ 0.86
ATP6V0A1-204ENST00000537728 TERF2IPQ9NYB0 399 aa20.4■□□□□ 0.86
ATP6V0A1-204ENST00000537728 ANKRD26Q9UPS8 1709 aa20.39■□□□□ 0.86
ATP6V0A1-204ENST00000537728 SPATA31D1Q6ZQQ2 1576 aa20.39■□□□□ 0.85
ATP6V0A1-204ENST00000537728 PDE4AP27815 886 aa20.39■□□□□ 0.85
ATP6V0A1-204ENST00000537728 GGNBP2Q9H3C7 697 aa20.38■□□□□ 0.85
ATP6V0A1-204ENST00000537728 U2AF1L5P0DN76 240 aaPredicted RBP20.38■□□□□ 0.85
ATP6V0A1-204ENST00000537728 U2AF1Q01081 240 aaKnown RBP eCLIP20.38■□□□□ 0.854e-7■□□□□ 10.4
ATP6V0A1-204ENST00000537728 CENPQQ7L2Z9 268 aaPredicted RBP20.38■□□□□ 0.85
ATP6V0A1-204ENST00000537728 NOP58Q9Y2X3 529 aaKnown RBP20.38■□□□□ 0.85
ATP6V0A1-204ENST00000537728 A2ML1A8K2U0 1454 aa20.37■□□□□ 0.85
ATP6V0A1-204ENST00000537728 KDM2BQ8NHM5 1336 aa20.37■□□□□ 0.85
ATP6V0A1-204ENST00000537728 CDK19Q9BWU1 502 aa20.36■□□□□ 0.85
ATP6V0A1-204ENST00000537728 RIMS2Q9UQ26 1411 aa20.36■□□□□ 0.85
ATP6V0A1-204ENST00000537728 HDGFL2Q7Z4V5 671 aaPredicted RBP20.35■□□□□ 0.85
ATP6V0A1-204ENST00000537728 IPO9Q96P70 1041 aaKnown RBP20.35■□□□□ 0.85
ATP6V0A1-204ENST00000537728 KIF13AQ9H1H9 1805 aa20.35■□□□□ 0.85
ATP6V0A1-204ENST00000537728 BACH2Q9BYV9 841 aa20.35■□□□□ 0.85
ATP6V0A1-204ENST00000537728 SKAP1Q86WV1 359 aa20.34■□□□□ 0.85
ATP6V0A1-204ENST00000537728 WDR63Q8IWG1 891 aa20.34■□□□□ 0.85
ATP6V0A1-204ENST00000537728 CD163L1Q9NR16 1453 aa20.34■□□□□ 0.85
ATP6V0A1-204ENST00000537728 CANXP27824 592 aaKnown RBP20.34■□□□□ 0.85
ATP6V0A1-204ENST00000537728 ARHGEF40Q8TER5 1519 aa20.34■□□□□ 0.85
ATP6V0A1-204ENST00000537728 KIF20BQ96Q89 1820 aa20.33■□□□□ 0.85
ATP6V0A1-204ENST00000537728 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.85
ATP6V0A1-204ENST00000537728 ESF1Q9H501 851 aaKnown RBP20.33■□□□□ 0.85
ATP6V0A1-204ENST00000537728 FYB1O15117 783 aa20.33■□□□□ 0.84
ATP6V0A1-204ENST00000537728 CCDC27Q2M243 656 aa20.33■□□□□ 0.84
ATP6V0A1-204ENST00000537728 SETD1AO15047 1707 aaKnown RBP20.33■□□□□ 0.84
ATP6V0A1-204ENST00000537728 NPM2Q86SE8 214 aaKnown RBP20.32■□□□□ 0.84
ATP6V0A1-204ENST00000537728 MED14O60244 1454 aa20.31■□□□□ 0.84
ATP6V0A1-204ENST00000537728 DLC1Q96QB1 1528 aa20.31■□□□□ 0.84
ATP6V0A1-204ENST00000537728 U2SURPO15042 1029 aaKnown RBP20.31■□□□□ 0.84
ATP6V0A1-204ENST00000537728 CABP1Q9NZU7 370 aa20.31■□□□□ 0.84
ATP6V0A1-204ENST00000537728 ADGRB2O60241 1585 aa20.3■□□□□ 0.84
ATP6V0A1-204ENST00000537728 PDE3AQ14432 1141 aa20.3■□□□□ 0.84
ATP6V0A1-204ENST00000537728 WAPLQ7Z5K2 1190 aa20.3■□□□□ 0.84
ATP6V0A1-204ENST00000537728 PAK3O75914 559 aaPredicted RBP20.29■□□□□ 0.84
ATP6V0A1-204ENST00000537728 ZBTB47Q9UFB7 747 aaPredicted RBP20.29■□□□□ 0.84
ATP6V0A1-204ENST00000537728 NCBP3Q53F19 620 aaKnown RBP20.29■□□□□ 0.84
ATP6V0A1-204ENST00000537728 NLRP1Q9C000 1473 aa20.28■□□□□ 0.84
ATP6V0A1-204ENST00000537728 FRAT1Q92837 279 aaPredicted RBP20.28■□□□□ 0.84
ATP6V0A1-204ENST00000537728 MYH16Q9H6N6 1097 aa20.27■□□□□ 0.84
ATP6V0A1-204ENST00000537728 COL3A1P02461 1466 aaPredicted RBP20.27■□□□□ 0.84
ATP6V0A1-204ENST00000537728 RARSP54136 660 aaKnown RBP20.26■□□□□ 0.83
ATP6V0A1-204ENST00000537728 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.26■□□□□ 0.83
ATP6V0A1-204ENST00000537728 ZMYM3Q14202 1370 aa20.26■□□□□ 0.83
ATP6V0A1-204ENST00000537728 NRXN3Q9Y4C0 1643 aa20.25■□□□□ 0.83
ATP6V0A1-204ENST00000537728 MAPK8IP3Q9UPT6 1336 aa20.25■□□□□ 0.83
ATP6V0A1-204ENST00000537728 PANK1Q8TE04 598 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms