RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 TRPC5Q9UL62 973 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-203ENST00000537194 SOS2Q07890 1332 aaPredicted RBP13.31□□□□□ -0.28
SMAD3-203ENST00000537194 RGL3Q3MIN7 710 aa13.3□□□□□ -0.28
SMAD3-203ENST00000537194 ANKRD30BQ9BXX2 1392 aa13.3□□□□□ -0.28
SMAD3-203ENST00000537194 STK26Q9P289 416 aa13.29□□□□□ -0.28
SMAD3-203ENST00000537194 ATAD2Q6PL18 1390 aa13.29□□□□□ -0.28
SMAD3-203ENST00000537194 PRAG1Q86YV5 1406 aa13.29□□□□□ -0.28
SMAD3-203ENST00000537194 LAMC1P11047 1609 aa13.28□□□□□ -0.28
SMAD3-203ENST00000537194 RGS12O14924 1447 aa13.27□□□□□ -0.29
SMAD3-203ENST00000537194 CDC42BPGQ6DT37 1551 aa13.25□□□□□ -0.29
SMAD3-203ENST00000537194 FOXO3O43524 673 aa13.25□□□□□ -0.29
SMAD3-203ENST00000537194 HAP1P54257 671 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-203ENST00000537194 FNBP4Q8N3X1 1017 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-203ENST00000537194 MPHOSPH9Q99550 1183 aa13.25□□□□□ -0.29
SMAD3-203ENST00000537194 ADGRF5Q8IZF2 1346 aa13.24□□□□□ -0.29
SMAD3-203ENST00000537194 NUTM2FA1L443 756 aa13.24□□□□□ -0.29
SMAD3-203ENST00000537194 ABCC11Q96J66 1382 aa13.23□□□□□ -0.29
SMAD3-203ENST00000537194 WAPLQ7Z5K2 1190 aa13.23□□□□□ -0.29
SMAD3-203ENST00000537194 COL22A1Q8NFW1 1626 aaPredicted RBP13.23□□□□□ -0.29
SMAD3-203ENST00000537194 XPCQ01831 940 aaPredicted RBP13.22□□□□□ -0.29
SMAD3-203ENST00000537194 PSME1Q06323 249 aa13.22□□□□□ -0.29
SMAD3-203ENST00000537194 TMEM132EQ6IEE7 984 aa13.22□□□□□ -0.29
SMAD3-203ENST00000537194 CCDC125Q86Z20 511 aa13.22□□□□□ -0.29
SMAD3-203ENST00000537194 MARF1Q9Y4F3 1742 aaKnown RBP13.21□□□□□ -0.3
SMAD3-203ENST00000537194 TECPR2O15040 1411 aa13.21□□□□□ -0.3
SMAD3-203ENST00000537194 DHX57Q6P158 1386 aaKnown RBP13.2□□□□□ -0.3
SMAD3-203ENST00000537194 SIRT1Q96EB6 747 aa13.2□□□□□ -0.3
SMAD3-203ENST00000537194 ZRANB1Q9UGI0 708 aa13.2□□□□□ -0.3
SMAD3-203ENST00000537194 KIF1AQ12756 1690 aa13.2□□□□□ -0.3
SMAD3-203ENST00000537194 ATRNO75882 1429 aa13.2□□□□□ -0.3
SMAD3-203ENST00000537194 SPATA31E1Q6ZUB1 1445 aa13.2□□□□□ -0.3
SMAD3-203ENST00000537194 KNDC1Q76NI1 1749 aa13.19□□□□□ -0.3
SMAD3-203ENST00000537194 MYOM2P54296 1465 aa13.19□□□□□ -0.3
SMAD3-203ENST00000537194 KRT28Q7Z3Y7 464 aa13.19□□□□□ -0.3
SMAD3-203ENST00000537194 GJD4Q96KN9 370 aaPredicted RBP13.19□□□□□ -0.3
SMAD3-203ENST00000537194 YTHDC2Q9H6S0 1430 aaKnown RBP13.19□□□□□ -0.3
SMAD3-203ENST00000537194 IFT172Q9UG01 1749 aa13.19□□□□□ -0.3
SMAD3-203ENST00000537194 PXDNQ92626 1479 aa13.18□□□□□ -0.3
SMAD3-203ENST00000537194 LMOD2Q6P5Q4 547 aa13.18□□□□□ -0.3
SMAD3-203ENST00000537194 UNC5CLQ8IV45 518 aa13.18□□□□□ -0.3
SMAD3-203ENST00000537194 POGKQ9P215 609 aa13.18□□□□□ -0.3
SMAD3-203ENST00000537194 PHF8Q9UPP1 1060 aa13.18□□□□□ -0.3
SMAD3-203ENST00000537194 PIK3C2GO75747 1445 aa13.18□□□□□ -0.3
SMAD3-203ENST00000537194 SPATA31A3Q5VYP0 1347 aa13.17□□□□□ -0.3
SMAD3-203ENST00000537194 SF3B2Q13435 895 aaKnown RBP13.17□□□□□ -0.3
SMAD3-203ENST00000537194 C14orf93Q9H972 538 aaKnown RBP13.17□□□□□ -0.3
SMAD3-203ENST00000537194 FMN2Q9NZ56 1722 aa13.16□□□□□ -0.3
SMAD3-203ENST00000537194 CCDC9Q9Y3X0 531 aaKnown RBP13.16□□□□□ -0.3
SMAD3-203ENST00000537194 PLEKHH1Q9ULM0 1364 aa13.15□□□□□ -0.3
SMAD3-203ENST00000537194 BCL9LQ86UU0 1499 aa13.15□□□□□ -0.3
SMAD3-203ENST00000537194 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.14□□□□□ -0.31
SMAD3-203ENST00000537194 SAFB2Q14151 953 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMAD3-203ENST00000537194 ARHGEF10O15013 1369 aa13.14□□□□□ -0.31
SMAD3-203ENST00000537194 RGPD8O14715 1765 aaPredicted RBP13.13□□□□□ -0.31
SMAD3-203ENST00000537194 EIF3AQ14152 1382 aaKnown RBP13.13□□□□□ -0.31
SMAD3-203ENST00000537194 PLEKHG5O94827 1062 aa13.13□□□□□ -0.31
SMAD3-203ENST00000537194 CFAP70Q5T0N1 1121 aa13.13□□□□□ -0.31
SMAD3-203ENST00000537194 PRAM1Q96QH2 718 aa13.13□□□□□ -0.31
SMAD3-203ENST00000537194 TNS3Q68CZ2 1445 aa13.13□□□□□ -0.31
SMAD3-203ENST00000537194 SBNO1A3KN83 1393 aa13.11□□□□□ -0.31
SMAD3-203ENST00000537194 GPRASP1Q5JY77 1395 aa13.11□□□□□ -0.31
SMAD3-203ENST00000537194 USP32Q8NFA0 1604 aa13.11□□□□□ -0.31
SMAD3-203ENST00000537194 A0A0G2JS52 829 aa13.11□□□□□ -0.31
SMAD3-203ENST00000537194 MYT1Q01538 1121 aa13.11□□□□□ -0.31
SMAD3-203ENST00000537194 RALGAPBQ86X10 1494 aa13.1□□□□□ -0.31
SMAD3-203ENST00000537194 SLIT2O94813 1529 aa13.1□□□□□ -0.31
SMAD3-203ENST00000537194 VPS72Q15906 364 aa13.1□□□□□ -0.31
SMAD3-203ENST00000537194 STAC3Q96MF2 364 aa13.1□□□□□ -0.31
SMAD3-203ENST00000537194 BLMP54132 1417 aaPredicted RBP13.09□□□□□ -0.31
SMAD3-203ENST00000537194 ANKARQ7Z5J8 1434 aa13.09□□□□□ -0.31
SMAD3-203ENST00000537194 SEPT12Q8IYM1 358 aa13.09□□□□□ -0.31
SMAD3-203ENST00000537194 PMFBP1Q8TBY8 1022 aa13.09□□□□□ -0.31
SMAD3-203ENST00000537194 CABLES1Q8TDN4 633 aa13.08□□□□□ -0.32
SMAD3-203ENST00000537194 TRAK1Q9UPV9 953 aa13.08□□□□□ -0.32
SMAD3-203ENST00000537194 NRXN1Q9ULB1 1477 aa13.08□□□□□ -0.32
SMAD3-203ENST00000537194 DLC1Q96QB1 1528 aa13.08□□□□□ -0.32
SMAD3-203ENST00000537194 NWD2Q9ULI1 1742 aa13.08□□□□□ -0.32
SMAD3-203ENST00000537194 KRT27Q7Z3Y8 459 aa13.07□□□□□ -0.32
SMAD3-203ENST00000537194 NGDNQ8NEJ9 315 aaKnown RBP13.07□□□□□ -0.32
SMAD3-203ENST00000537194 KDM2AQ9Y2K7 1162 aa13.07□□□□□ -0.32
SMAD3-203ENST00000537194 MINK1Q8N4C8 1332 aaPredicted RBP13.06□□□□□ -0.32
SMAD3-203ENST00000537194 GLI3P10071 1580 aa13.06□□□□□ -0.32
SMAD3-203ENST00000537194 RAB3GAP2Q9H2M9 1393 aa13.06□□□□□ -0.32
SMAD3-203ENST00000537194 BRWD3Q6RI45 1802 aa13.05□□□□□ -0.32
SMAD3-203ENST00000537194 PAK3O75914 559 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-203ENST00000537194 DCAF11Q8TEB1 546 aa13.05□□□□□ -0.32
SMAD3-203ENST00000537194 HIRIP3Q9BW71 556 aaPredicted RBP13.05□□□□□ -0.32
SMAD3-203ENST00000537194 PLCH1Q4KWH8 1693 aa13.05□□□□□ -0.32
SMAD3-203ENST00000537194 BAG6P46379 1132 aa13.04□□□□□ -0.32
SMAD3-203ENST00000537194 EP400Q96L91 3159 aa13.04□□□□□ -0.32
SMAD3-203ENST00000537194 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
SMAD3-203ENST00000537194 FAM83GA6ND36 823 aa13.03□□□□□ -0.32
SMAD3-203ENST00000537194 WASLO00401 505 aaPredicted RBP13.03□□□□□ -0.32
SMAD3-203ENST00000537194 BTG4Q9NY30 223 aa13.03□□□□□ -0.32
SMAD3-203ENST00000537194 ONECUT3O60422 494 aaPredicted RBP13.02□□□□□ -0.33
SMAD3-203ENST00000537194 ABCA3Q99758 1704 aa13.02□□□□□ -0.33
SMAD3-203ENST00000537194 FAM98CQ17RN3 349 aaKnown RBP13.01□□□□□ -0.33
SMAD3-203ENST00000537194 DEFB132Q7Z7B7 95 aa13.01□□□□□ -0.33
SMAD3-203ENST00000537194 PRDM11Q9NQV5 511 aa13.01□□□□□ -0.33
SMAD3-203ENST00000537194 COL14A1Q05707 1796 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms