RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 C8orf37Q96NL8 207 aa29.23■■■□□ 2.27
TNFRSF1B-204ENST00000536782 STK26Q9P289 416 aa29.23■■■□□ 2.27
TNFRSF1B-204ENST00000536782 LRPPRCP42704 1394 aaKnown RBP29.21■■■□□ 2.27
TNFRSF1B-204ENST00000536782 CDC42BPGQ6DT37 1551 aa29.21■■■□□ 2.27
TNFRSF1B-204ENST00000536782 TECPR2O15040 1411 aa29.2■■■□□ 2.27
TNFRSF1B-204ENST00000536782 PIK3C2GO75747 1445 aa29.2■■■□□ 2.26
TNFRSF1B-204ENST00000536782 ESCO1Q5FWF5 840 aa29.19■■■□□ 2.26
TNFRSF1B-204ENST00000536782 COL22A1Q8NFW1 1626 aaPredicted RBP29.19■■■□□ 2.26
TNFRSF1B-204ENST00000536782 ABCC11Q96J66 1382 aa29.18■■■□□ 2.26
TNFRSF1B-204ENST00000536782 TMEM132EQ6IEE7 984 aa29.18■■■□□ 2.26
TNFRSF1B-204ENST00000536782 WAPLQ7Z5K2 1190 aa29.18■■■□□ 2.26
TNFRSF1B-204ENST00000536782 ADAMTS2O95450 1211 aa29.17■■■□□ 2.26
TNFRSF1B-204ENST00000536782 RGS12O14924 1447 aa29.17■■■□□ 2.26
TNFRSF1B-204ENST00000536782 KNDC1Q76NI1 1749 aa29.16■■■□□ 2.26
TNFRSF1B-204ENST00000536782 NGLY1Q96IV0 654 aa29.15■■■□□ 2.26
TNFRSF1B-204ENST00000536782 QTRT2Q9H974 415 aaKnown RBP29.15■■■□□ 2.26
TNFRSF1B-204ENST00000536782 NPHP3Q7Z494 1330 aa29.15■■■□□ 2.26
TNFRSF1B-204ENST00000536782 PXDNQ92626 1479 aa29.12■■■□□ 2.25
TNFRSF1B-204ENST00000536782 PLEKHH1Q9ULM0 1364 aa29.12■■■□□ 2.25
TNFRSF1B-204ENST00000536782 YTHDC2Q9H6S0 1430 aaKnown RBP29.11■■■□□ 2.25
TNFRSF1B-204ENST00000536782 RBM6P78332 1123 aaKnown RBP29.11■■■□□ 2.25
TNFRSF1B-204ENST00000536782 MARF1Q9Y4F3 1742 aaKnown RBP29.11■■■□□ 2.25
TNFRSF1B-204ENST00000536782 NUTM2FA1L443 756 aa29.1■■■□□ 2.25
TNFRSF1B-204ENST00000536782 C14orf93Q9H972 538 aaKnown RBP29.1■■■□□ 2.25
TNFRSF1B-204ENST00000536782 FOXO3O43524 673 aa29.09■■■□□ 2.25
TNFRSF1B-204ENST00000536782 RAB3GAP2Q9H2M9 1393 aa29.09■■■□□ 2.25
TNFRSF1B-204ENST00000536782 SIRT1Q96EB6 747 aa29.08■■■□□ 2.25
TNFRSF1B-204ENST00000536782 MYOM2P54296 1465 aa29.08■■■□□ 2.25
TNFRSF1B-204ENST00000536782 FMN2Q9NZ56 1722 aa29.08■■■□□ 2.25
TNFRSF1B-204ENST00000536782 NRXN1Q9ULB1 1477 aa29.06■■■□□ 2.24
TNFRSF1B-204ENST00000536782 XPCQ01831 940 aaPredicted RBP29.05■■■□□ 2.24
TNFRSF1B-204ENST00000536782 USP21Q9UK80 565 aa29.05■■■□□ 2.24
TNFRSF1B-204ENST00000536782 RGPD8O14715 1765 aaPredicted RBP29.05■■■□□ 2.24
TNFRSF1B-204ENST00000536782 DHX57Q6P158 1386 aaKnown RBP29.04■■■□□ 2.24
TNFRSF1B-204ENST00000536782 CFAP70Q5T0N1 1121 aa29.04■■■□□ 2.24
TNFRSF1B-204ENST00000536782 FNBP4Q8N3X1 1017 aaPredicted RBP29.03■■■□□ 2.24
TNFRSF1B-204ENST00000536782 TRPC5Q9UL62 973 aaPredicted RBP29■■■□□ 2.23
TNFRSF1B-204ENST00000536782 ATRNO75882 1429 aa29■■■□□ 2.23
TNFRSF1B-204ENST00000536782 EP400Q96L91 3159 aa29■■■□□ 2.23
TNFRSF1B-204ENST00000536782 BCL9LQ86UU0 1499 aa28.97■■■□□ 2.23
TNFRSF1B-204ENST00000536782 KIF1AQ12756 1690 aa28.96■■■□□ 2.23
TNFRSF1B-204ENST00000536782 PRAM1Q96QH2 718 aa28.95■■■□□ 2.22
TNFRSF1B-204ENST00000536782 SPATA31A3Q5VYP0 1347 aa28.94■■■□□ 2.22
TNFRSF1B-204ENST00000536782 SAFB2Q14151 953 aaKnown RBP eCLIP28.93■■■□□ 2.22
TNFRSF1B-204ENST00000536782 KRT28Q7Z3Y7 464 aa28.93■■■□□ 2.22
TNFRSF1B-204ENST00000536782 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.92■■■□□ 2.22
TNFRSF1B-204ENST00000536782 POGKQ9P215 609 aa28.92■■■□□ 2.22
TNFRSF1B-204ENST00000536782 PHF8Q9UPP1 1060 aa28.92■■■□□ 2.22
TNFRSF1B-204ENST00000536782 DLC1Q96QB1 1528 aa28.9■■■□□ 2.22
TNFRSF1B-204ENST00000536782 HRCP23327 699 aa28.88■■■□□ 2.21
TNFRSF1B-204ENST00000536782 PSME1Q06323 249 aa28.88■■■□□ 2.21
TNFRSF1B-204ENST00000536782 KDM2AQ9Y2K7 1162 aa28.88■■■□□ 2.21
TNFRSF1B-204ENST00000536782 SRCAPQ6ZRS2 3230 aa28.87■■■□□ 2.21
TNFRSF1B-204ENST00000536782 DCAF11Q8TEB1 546 aa28.87■■■□□ 2.21
TNFRSF1B-204ENST00000536782 ATAD2Q6PL18 1390 aa28.87■■■□□ 2.21
TNFRSF1B-204ENST00000536782 ADGRB1O14514 1584 aa28.86■■■□□ 2.21
TNFRSF1B-204ENST00000536782 USP32Q8NFA0 1604 aa28.85■■■□□ 2.21
TNFRSF1B-204ENST00000536782 TRAK1Q9UPV9 953 aa28.85■■■□□ 2.21
TNFRSF1B-204ENST00000536782 SLIT2O94813 1529 aa28.84■■■□□ 2.21
TNFRSF1B-204ENST00000536782 STAC3Q96MF2 364 aa28.84■■■□□ 2.21
TNFRSF1B-204ENST00000536782 TNS3Q68CZ2 1445 aa28.84■■■□□ 2.21
TNFRSF1B-204ENST00000536782 GLI3P10071 1580 aa28.84■■■□□ 2.21
TNFRSF1B-204ENST00000536782 ABCA3Q99758 1704 aa28.83■■■□□ 2.21
TNFRSF1B-204ENST00000536782 GJD4Q96KN9 370 aaPredicted RBP28.82■■■□□ 2.2
TNFRSF1B-204ENST00000536782 ANKARQ7Z5J8 1434 aa28.82■■■□□ 2.2
TNFRSF1B-204ENST00000536782 BRWD3Q6RI45 1802 aa28.81■■■□□ 2.2
TNFRSF1B-204ENST00000536782 HAP1P54257 671 aaPredicted RBP28.81■■■□□ 2.2
TNFRSF1B-204ENST00000536782 SBNO1A3KN83 1393 aa28.8■■■□□ 2.2
TNFRSF1B-204ENST00000536782 UNC5CLQ8IV45 518 aa28.8■■■□□ 2.2
TNFRSF1B-204ENST00000536782 ADGRB2O60241 1585 aa28.79■■■□□ 2.2
TNFRSF1B-204ENST00000536782 PMFBP1Q8TBY8 1022 aa28.79■■■□□ 2.2
TNFRSF1B-204ENST00000536782 LMOD2Q6P5Q4 547 aa28.78■■■□□ 2.2
TNFRSF1B-204ENST00000536782 HIRIP3Q9BW71 556 aaPredicted RBP28.78■■■□□ 2.2
TNFRSF1B-204ENST00000536782 PLCH1Q4KWH8 1693 aa28.77■■■□□ 2.2
TNFRSF1B-204ENST00000536782 RALGAPBQ86X10 1494 aa28.77■■■□□ 2.2
TNFRSF1B-204ENST00000536782 ARHGEF10O15013 1369 aa28.76■■■□□ 2.2
TNFRSF1B-204ENST00000536782 MINK1Q8N4C8 1332 aaPredicted RBP28.76■■■□□ 2.19
TNFRSF1B-204ENST00000536782 CABLES1Q8TDN4 633 aa28.76■■■□□ 2.19
TNFRSF1B-204ENST00000536782 EIF3AQ14152 1382 aaKnown RBP28.75■■■□□ 2.19
TNFRSF1B-204ENST00000536782 TRPM3Q9HCF6 1732 aaPredicted RBP28.75■■■□□ 2.19
TNFRSF1B-204ENST00000536782 NWD2Q9ULI1 1742 aa28.74■■■□□ 2.19
TNFRSF1B-204ENST00000536782 PLEKHG5O94827 1062 aa28.74■■■□□ 2.19
TNFRSF1B-204ENST00000536782 WASLO00401 505 aaPredicted RBP28.71■■■□□ 2.19
TNFRSF1B-204ENST00000536782 GPRASP1Q5JY77 1395 aa28.7■■■□□ 2.18
TNFRSF1B-204ENST00000536782 PRR36Q9H6K5 1346 aa28.69■■■□□ 2.18
TNFRSF1B-204ENST00000536782 TULP4Q9NRJ4 1543 aa28.69■■■□□ 2.18
TNFRSF1B-204ENST00000536782 ALS2Q96Q42 1657 aa28.69■■■□□ 2.18
TNFRSF1B-204ENST00000536782 CCDC125Q86Z20 511 aa28.67■■■□□ 2.18
TNFRSF1B-204ENST00000536782 VPS72Q15906 364 aa28.66■■■□□ 2.18
TNFRSF1B-204ENST00000536782 NRAPQ86VF7 1730 aa28.66■■■□□ 2.18
TNFRSF1B-204ENST00000536782 CRYBG1Q9Y4K1 1723 aa28.64■■■□□ 2.18
TNFRSF1B-204ENST00000536782 NGDNQ8NEJ9 315 aaKnown RBP28.64■■■□□ 2.18
TNFRSF1B-204ENST00000536782 ARHGEF28Q8N1W1 1705 aaKnown RBP28.63■■■□□ 2.17
TNFRSF1B-204ENST00000536782 FAM83GA6ND36 823 aa28.62■■■□□ 2.17
TNFRSF1B-204ENST00000536782 CCDC9Q9Y3X0 531 aaKnown RBP28.62■■■□□ 2.17
TNFRSF1B-204ENST00000536782 ONECUT3O60422 494 aaPredicted RBP28.59■■■□□ 2.17
TNFRSF1B-204ENST00000536782 SEPT12Q8IYM1 358 aa28.59■■■□□ 2.17
TNFRSF1B-204ENST00000536782 NUDT16Q96DE0 195 aaKnown RBP28.58■■■□□ 2.17
TNFRSF1B-204ENST00000536782 PAK3O75914 559 aaPredicted RBP28.57■■■□□ 2.16
TNFRSF1B-204ENST00000536782 BLMP54132 1417 aaPredicted RBP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms